RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 BRK1Q8WUW1 75 aa7.8□□□□□ -1.16
SREK1-209ENST00000520953 PRR15LQ9BU68 103 aa7.79□□□□□ -1.16
SREK1-209ENST00000520953 PRO0628Q9UI54 55 aa7.76□□□□□ -1.17
SREK1-209ENST00000520953 LINC01558Q9Y6Z2 57 aa7.76□□□□□ -1.17
SREK1-209ENST00000520953 CHKB-CPT1BH3BT56 60 aa7.74□□□□□ -1.17
SREK1-209ENST00000520953 A8MU10 97 aa7.62□□□□□ -1.19
SREK1-209ENST00000520953 KRTAP3-1Q9BYR8 98 aa7.62□□□□□ -1.19
SREK1-209ENST00000520953 FAT4Q6V0I7 4981 aa7.62□□□□□ -1.19
SREK1-209ENST00000520953 A6NED7 52 aa7.6□□□□□ -1.19
SREK1-209ENST00000520953 KRTAP19-2Q3LHN2 52 aa7.59□□□□□ -1.19
SREK1-209ENST00000520953 LCA10Q71F78 164 aa7.57□□□□□ -1.2
SREK1-209ENST00000520953 COX6B2Q6YFQ2 88 aa7.56□□□□□ -1.2
SREK1-209ENST00000520953 A0A1B0GU69 56 aa7.54□□□□□ -1.2
SREK1-209ENST00000520953 RBM12B-AS1Q9P1G2 102 aa7.53□□□□□ -1.2
SREK1-209ENST00000520953 CDC42SE1Q9NRR8 79 aa7.51□□□□□ -1.21
SREK1-209ENST00000520953 LCE2CQ5TA81 110 aa7.49□□□□□ -1.21
SREK1-209ENST00000520953 FLGP20930 4061 aaPredicted RBP7.49□□□□□ -1.21
SREK1-209ENST00000520953 SPTSSBQ8NFR3 76 aa7.44□□□□□ -1.22
SREK1-209ENST00000520953 H1FX-AS1Q4G0G2 97 aa7.43□□□□□ -1.22
SREK1-209ENST00000520953 UQCR11O14957 56 aa7.36□□□□□ -1.23
SREK1-209ENST00000520953 SEC61GP60059 68 aa7.36□□□□□ -1.23
SREK1-209ENST00000520953 PMAIP1Q13794 54 aa7.36□□□□□ -1.23
SREK1-209ENST00000520953 KRTAP3-3Q9BYR6 98 aa7.35□□□□□ -1.23
SREK1-209ENST00000520953 SPATA8Q6RVD6 105 aa7.35□□□□□ -1.23
SREK1-209ENST00000520953 S4R3F8 94 aa7.35□□□□□ -1.23
SREK1-209ENST00000520953 MT1HP80294 61 aa7.33□□□□□ -1.24
SREK1-209ENST00000520953 MIR22HGQ0VDD5 57 aa7.32□□□□□ -1.24
SREK1-209ENST00000520953 A6NN06 94 aa7.29□□□□□ -1.24
SREK1-209ENST00000520953 A0A1B0GU33 70 aa7.21□□□□□ -1.26
SREK1-209ENST00000520953 H0YAA0 97 aa7.2□□□□□ -1.26
SREK1-209ENST00000520953 M0R2T5 61 aa7.2□□□□□ -1.26
SREK1-209ENST00000520953 LCE2AQ5TA79 106 aaPredicted RBP7.18□□□□□ -1.26
SREK1-209ENST00000520953 CSAG1Q6PB30 78 aa7.18□□□□□ -1.26
SREK1-209ENST00000520953 KTN1-AS1Q86SY8 53 aa7.15□□□□□ -1.27
SREK1-209ENST00000520953 KRTAP10-6P60371 365 aaPredicted RBP7.14□□□□□ -1.27
SREK1-209ENST00000520953 KRTAP3-2Q9BYR7 98 aa7.12□□□□□ -1.27
SREK1-209ENST00000520953 LORP23490 312 aaPredicted RBP7.04□□□□□ -1.28
SREK1-209ENST00000520953 P0C880 135 aa7.03□□□□□ -1.28
SREK1-209ENST00000520953 ADM2Q7Z4H4 148 aa7.03□□□□□ -1.28
SREK1-209ENST00000520953 KRTAP9-8Q9BYQ0 159 aa7.03□□□□□ -1.28
SREK1-209ENST00000520953 KRTAP13-4Q3LI77 160 aa7.02□□□□□ -1.29
SREK1-209ENST00000520953 MT2AP02795 61 aa7.01□□□□□ -1.29
SREK1-209ENST00000520953 MT1FP04733 61 aa6.98□□□□□ -1.29
SREK1-209ENST00000520953 PRAC1Q96KF2 57 aa6.92□□□□□ -1.3
SREK1-209ENST00000520953 A0A0D9SG42 100 aa6.91□□□□□ -1.3
SREK1-209ENST00000520953 KRTAP10-10P60014 251 aa6.9□□□□□ -1.3
SREK1-209ENST00000520953 K7ERS5 55 aa6.87□□□□□ -1.31
SREK1-209ENST00000520953 M0QZ58 72 aa6.79□□□□□ -1.32
SREK1-209ENST00000520953 LCE2DQ5TA82 110 aaPredicted RBP6.78□□□□□ -1.32
SREK1-209ENST00000520953 KRTAP9-3Q9BYQ3 159 aa6.78□□□□□ -1.32
SREK1-209ENST00000520953 KRTAP19-1Q8IUB9 90 aa6.76□□□□□ -1.33
SREK1-209ENST00000520953 KRTAP12-2P59991 146 aa6.76□□□□□ -1.33
SREK1-209ENST00000520953 R4GN34 69 aa6.75□□□□□ -1.33
SREK1-209ENST00000520953 KRTAP12-1P59990 96 aa6.74□□□□□ -1.33
SREK1-209ENST00000520953 SPRR2GQ9BYE4 73 aa6.7□□□□□ -1.34
SREK1-209ENST00000520953 ROMO1P60602 79 aa6.69□□□□□ -1.34
SREK1-209ENST00000520953 LINC01554Q52M75 96 aa6.69□□□□□ -1.34
SREK1-209ENST00000520953 CRIPTQ9P021 101 aa6.69□□□□□ -1.34
SREK1-209ENST00000520953 SPINT4Q6UDR6 99 aa6.69□□□□□ -1.34
SREK1-209ENST00000520953 LCE2BO14633 110 aa6.67□□□□□ -1.34
SREK1-209ENST00000520953 USH2AO75445 5202 aa6.63□□□□□ -1.35
SREK1-209ENST00000520953 KRTAP25-1Q3LHN0 102 aa6.62□□□□□ -1.35
SREK1-209ENST00000520953 KRTAP19-8Q3LI54 63 aa6.55□□□□□ -1.36
SREK1-209ENST00000520953 MT1BP07438 61 aa6.55□□□□□ -1.36
SREK1-209ENST00000520953 FSIP2Q5CZC0 6907 aa6.54□□□□□ -1.36
SREK1-209ENST00000520953 SSPOA2VEC9 5147 aa6.47□□□□□ -1.37
SREK1-209ENST00000520953 KRTAP9-2Q9BYQ4 174 aa6.45□□□□□ -1.38
SREK1-209ENST00000520953 C10orf95Q9H7T3 257 aa6.45□□□□□ -1.38
SREK1-209ENST00000520953 PLAC4Q8WY50 150 aa6.4□□□□□ -1.39
SREK1-209ENST00000520953 CAMK2N1Q7Z7J9 78 aa6.31□□□□□ -1.4
SREK1-209ENST00000520953 MT1XP80297 61 aa6.29□□□□□ -1.4
SREK1-209ENST00000520953 KRTAP10-5P60370 271 aa6.27□□□□□ -1.41
SREK1-209ENST00000520953 KRTAP19-6Q3LI70 58 aa6.23□□□□□ -1.41
SREK1-209ENST00000520953 FCGBPQ9Y6R7 5405 aaPredicted RBP6.19□□□□□ -1.42
SREK1-209ENST00000520953 CRCT1Q9UGL9 99 aa6.17□□□□□ -1.42
SREK1-209ENST00000520953 PRO2289Q9P1D8 64 aa6.11□□□□□ -1.43
SREK1-209ENST00000520953 KRTAP10-7P60409 375 aaPredicted RBP6.06□□□□□ -1.44
SREK1-209ENST00000520953 KMT2DO14686 5537 aa6.05□□□□□ -1.44
SREK1-209ENST00000520953 TNP1P09430 55 aa6.04□□□□□ -1.44
SREK1-209ENST00000520953 PP632Q6XCG6 107 aa6.03□□□□□ -1.44
SREK1-209ENST00000520953 KRTAP9-6A0A140TA67 174 aa5.99□□□□□ -1.45
SREK1-209ENST00000520953 KRTAP15-1Q3LI76 137 aa5.97□□□□□ -1.45
SREK1-209ENST00000520953 KRTAP10-12P60413 245 aa5.93□□□□□ -1.46
SREK1-209ENST00000520953 KRTAP23-1A1A580 65 aa5.92□□□□□ -1.46
SREK1-209ENST00000520953 KRTAP4-8A0A0G2JLE6 195 aa5.91□□□□□ -1.46
SREK1-209ENST00000520953 KRTAP4-8Q9BYQ9 185 aa5.91□□□□□ -1.46
SREK1-209ENST00000520953 MACF1Q9UPN3 7388 aaKnown RBP5.9□□□□□ -1.46
SREK1-209ENST00000520953 LCE3AQ5TA76 89 aa5.82□□□□□ -1.48
SREK1-209ENST00000520953 SYNE2Q8WXH0 6885 aaKnown RBP5.8□□□□□ -1.48
SREK1-209ENST00000520953 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.73□□□□□ -1.49
SREK1-209ENST00000520953 KRTAP8-1Q8IUC2 63 aa5.69□□□□□ -1.5
SREK1-209ENST00000520953 NDUFAF8A1L188 74 aa5.67□□□□□ -1.5
SREK1-209ENST00000520953 KRTAP19-5Q3LI72 72 aa5.65□□□□□ -1.51
SREK1-209ENST00000520953 KRTAP19-7Q3SYF9 63 aa5.62□□□□□ -1.51
SREK1-209ENST00000520953 MUC12Q9UKN1 5478 aa5.62□□□□□ -1.51
SREK1-209ENST00000520953 SPRR2FQ96RM1 72 aa5.55□□□□□ -1.52
SREK1-209ENST00000520953 H3BS24 57 aa5.55□□□□□ -1.52
SREK1-209ENST00000520953 KRTAP12-3P60328 96 aa5.55□□□□□ -1.52
SREK1-209ENST00000520953 SPRR5A0A1B0GTR4 108 aa5.54□□□□□ -1.52
SREK1-209ENST00000520953 MT1EP04732 61 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms