RNA–Protein interactions for RNA: ENST00000520911.5

RNF130-204, Transcript of ring finger protein 130, humanhuman

TSL 1 (best)

Gene RNF130, Length 1,790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF130-204ENST00000520911 DMAC1Q96GE9 116 aa13.7□□□□□ -0.22
RNF130-204ENST00000520911 S4R3F8 94 aa13.68□□□□□ -0.22
RNF130-204ENST00000520911 LCA10Q71F78 164 aa13.66□□□□□ -0.22
RNF130-204ENST00000520911 SPANXA2-OT1Q8N9U9 137 aa13.64□□□□□ -0.23
RNF130-204ENST00000520911 SERP1Q9Y6X1 66 aa13.64□□□□□ -0.23
RNF130-204ENST00000520911 KRTAP10-6P60371 365 aaPredicted RBP13.58□□□□□ -0.24
RNF130-204ENST00000520911 KRTAP3-3Q9BYR6 98 aa13.56□□□□□ -0.24
RNF130-204ENST00000520911 ACYP2P14621 99 aa13.53□□□□□ -0.24
RNF130-204ENST00000520911 LORP23490 312 aaPredicted RBP13.52□□□□□ -0.25
RNF130-204ENST00000520911 CSAG1Q6PB30 78 aa13.44□□□□□ -0.26
RNF130-204ENST00000520911 KRTAP9-8Q9BYQ0 159 aa13.39□□□□□ -0.27
RNF130-204ENST00000520911 SMIM26A0A096LP01 95 aa13.33□□□□□ -0.28
RNF130-204ENST00000520911 CHKB-CPT1BH3BT56 60 aa13.31□□□□□ -0.28
RNF130-204ENST00000520911 MT2AP02795 61 aa13.29□□□□□ -0.28
RNF130-204ENST00000520911 COA5Q86WW8 74 aa13.28□□□□□ -0.28
RNF130-204ENST00000520911 MT1FP04733 61 aa13.21□□□□□ -0.29
RNF130-204ENST00000520911 KRTAP10-10P60014 251 aa13.15□□□□□ -0.3
RNF130-204ENST00000520911 SPTSSBQ8NFR3 76 aa13.12□□□□□ -0.31
RNF130-204ENST00000520911 ADM2Q7Z4H4 148 aa13.02□□□□□ -0.32
RNF130-204ENST00000520911 H0YAA0 97 aa13.02□□□□□ -0.33
RNF130-204ENST00000520911 Q1T7F1 81 aa13□□□□□ -0.33
RNF130-204ENST00000520911 V9GYY9 64 aa12.97□□□□□ -0.33
RNF130-204ENST00000520911 KRTAP9-3Q9BYQ3 159 aa12.92□□□□□ -0.34
RNF130-204ENST00000520911 KRTAP3-2Q9BYR7 98 aa12.91□□□□□ -0.34
RNF130-204ENST00000520911 P0C880 135 aa12.89□□□□□ -0.35
RNF130-204ENST00000520911 LCE2DQ5TA82 110 aaPredicted RBP12.84□□□□□ -0.35
RNF130-204ENST00000520911 KRTAP9-2Q9BYQ4 174 aa12.76□□□□□ -0.37
RNF130-204ENST00000520911 LINC01558Q9Y6Z2 57 aa12.74□□□□□ -0.37
RNF130-204ENST00000520911 KRTAP19-1Q8IUB9 90 aa12.72□□□□□ -0.37
RNF130-204ENST00000520911 LCE2BO14633 110 aa12.71□□□□□ -0.38
RNF130-204ENST00000520911 PSPHP1O15172 72 aa12.69□□□□□ -0.38
RNF130-204ENST00000520911 CRIPTQ9P021 101 aa12.68□□□□□ -0.38
RNF130-204ENST00000520911 PRR15LQ9BU68 103 aa12.64□□□□□ -0.39
RNF130-204ENST00000520911 SPRR2GQ9BYE4 73 aa12.64□□□□□ -0.39
RNF130-204ENST00000520911 SEC61GP60059 68 aa12.63□□□□□ -0.39
RNF130-204ENST00000520911 Q5VV11 94 aa12.61□□□□□ -0.39
RNF130-204ENST00000520911 R4GN34 69 aa12.58□□□□□ -0.4
RNF130-204ENST00000520911 USH2AO75445 5202 aa12.56□□□□□ -0.4
RNF130-204ENST00000520911 A0A1B0GU69 56 aa12.56□□□□□ -0.4
RNF130-204ENST00000520911 M0QZ58 72 aa12.55□□□□□ -0.4
RNF130-204ENST00000520911 FSIP2Q5CZC0 6907 aa12.53□□□□□ -0.4
RNF130-204ENST00000520911 KRTAP13-4Q3LI77 160 aa12.43□□□□□ -0.42
RNF130-204ENST00000520911 BRK1Q8WUW1 75 aa12.43□□□□□ -0.42
RNF130-204ENST00000520911 KRTAP19-8Q3LI54 63 aa12.41□□□□□ -0.42
RNF130-204ENST00000520911 A0A1B0GU33 70 aa12.39□□□□□ -0.43
RNF130-204ENST00000520911 LINC01554Q52M75 96 aa12.38□□□□□ -0.43
RNF130-204ENST00000520911 MT1BP07438 61 aa12.35□□□□□ -0.43
RNF130-204ENST00000520911 PRO0628Q9UI54 55 aa12.34□□□□□ -0.43
RNF130-204ENST00000520911 A6NED7 52 aa12.33□□□□□ -0.44
RNF130-204ENST00000520911 SPATA8Q6RVD6 105 aa12.3□□□□□ -0.44
RNF130-204ENST00000520911 SSPOA2VEC9 5147 aa12.29□□□□□ -0.44
RNF130-204ENST00000520911 CDC42SE1Q9NRR8 79 aa12.19□□□□□ -0.46
RNF130-204ENST00000520911 CRCT1Q9UGL9 99 aa12.18□□□□□ -0.46
RNF130-204ENST00000520911 A0A0D9SG42 100 aa12.14□□□□□ -0.47
RNF130-204ENST00000520911 UQCR11O14957 56 aa12.13□□□□□ -0.47
RNF130-204ENST00000520911 PLAC4Q8WY50 150 aa12.07□□□□□ -0.48
RNF130-204ENST00000520911 A8MU10 97 aa12.05□□□□□ -0.48
RNF130-204ENST00000520911 KRTAP19-6Q3LI70 58 aa12.02□□□□□ -0.48
RNF130-204ENST00000520911 SVIPQ8NHG7 77 aa12.02□□□□□ -0.48
RNF130-204ENST00000520911 KRTAP9-6A0A140TA67 174 aa12□□□□□ -0.49
RNF130-204ENST00000520911 A6NN06 94 aa12□□□□□ -0.49
RNF130-204ENST00000520911 MIR22HGQ0VDD5 57 aa12□□□□□ -0.49
RNF130-204ENST00000520911 SPINT4Q6UDR6 99 aa11.87□□□□□ -0.51
RNF130-204ENST00000520911 KRTAP12-1P59990 96 aa11.87□□□□□ -0.51
RNF130-204ENST00000520911 FCGBPQ9Y6R7 5405 aaPredicted RBP11.86□□□□□ -0.51
RNF130-204ENST00000520911 KRTAP12-2P59991 146 aa11.83□□□□□ -0.52
RNF130-204ENST00000520911 KRTAP10-5P60370 271 aa11.83□□□□□ -0.52
RNF130-204ENST00000520911 MT1XP80297 61 aa11.8□□□□□ -0.52
RNF130-204ENST00000520911 PMAIP1Q13794 54 aa11.77□□□□□ -0.53
RNF130-204ENST00000520911 CAMK2N1Q7Z7J9 78 aa11.71□□□□□ -0.54
RNF130-204ENST00000520911 PRO2289Q9P1D8 64 aa11.67□□□□□ -0.54
RNF130-204ENST00000520911 K7ERS5 55 aa11.44□□□□□ -0.58
RNF130-204ENST00000520911 KTN1-AS1Q86SY8 53 aa11.39□□□□□ -0.59
RNF130-204ENST00000520911 MACF1Q9UPN3 7388 aaKnown RBP11.35□□□□□ -0.59
RNF130-204ENST00000520911 KRTAP10-7P60409 375 aaPredicted RBP11.32□□□□□ -0.6
RNF130-204ENST00000520911 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.31□□□□□ -0.6
RNF130-204ENST00000520911 C10orf95Q9H7T3 257 aa11.29□□□□□ -0.6
RNF130-204ENST00000520911 KMT2DO14686 5537 aa11.19□□□□□ -0.62
RNF130-204ENST00000520911 KRTAP10-12P60413 245 aa11.17□□□□□ -0.62
RNF130-204ENST00000520911 SYNE2Q8WXH0 6885 aaKnown RBP11.16□□□□□ -0.62
RNF130-204ENST00000520911 KRTAP4-8A0A0G2JLE6 195 aa11.08□□□□□ -0.64
RNF130-204ENST00000520911 KRTAP4-8Q9BYQ9 185 aa11.08□□□□□ -0.64
RNF130-204ENST00000520911 TNP1P09430 55 aa11□□□□□ -0.65
RNF130-204ENST00000520911 ROMO1P60602 79 aa10.99□□□□□ -0.65
RNF130-204ENST00000520911 PRAC1Q96KF2 57 aa10.93□□□□□ -0.66
RNF130-204ENST00000520911 KRTAP9-7A8MTY7 169 aa10.9□□□□□ -0.66
RNF130-204ENST00000520911 KRTAP8-1Q8IUC2 63 aa10.88□□□□□ -0.67
RNF130-204ENST00000520911 KRTAP6-3Q3LI67 103 aa10.82□□□□□ -0.68
RNF130-204ENST00000520911 KRTAP25-1Q3LHN0 102 aa10.79□□□□□ -0.68
RNF130-204ENST00000520911 LCE3AQ5TA76 89 aa10.73□□□□□ -0.69
RNF130-204ENST00000520911 KRTAP5-9P26371 169 aa10.7□□□□□ -0.7
RNF130-204ENST00000520911 SPRR2FQ96RM1 72 aa10.67□□□□□ -0.7
RNF130-204ENST00000520911 MUC12Q9UKN1 5478 aa10.58□□□□□ -0.72
RNF130-204ENST00000520911 KRTAP19-7Q3SYF9 63 aa10.54□□□□□ -0.72
RNF130-204ENST00000520911 KRTAP19-5Q3LI72 72 aa10.52□□□□□ -0.72
RNF130-204ENST00000520911 MDN1Q9NU22 5596 aa10.43□□□□□ -0.74
RNF130-204ENST00000520911 MT1EP04732 61 aa10.38□□□□□ -0.75
RNF130-204ENST00000520911 KRTAP23-1A1A580 65 aa10.37□□□□□ -0.75
RNF130-204ENST00000520911 KRTAP12-3P60328 96 aa10.29□□□□□ -0.76
RNF130-204ENST00000520911 SPRR2EP22531 72 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms