RNA–Protein interactions for RNA: ENST00000520895.5

HDAC2-209, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-209ENST00000520895 KLKP1Q107X0 134 aa7.29□□□□□ -1.24
HDAC2-209ENST00000520895 SMIM20Q8N5G0 67 aa7.27□□□□□ -1.25
HDAC2-209ENST00000520895 KRTAP9-3Q9BYQ3 159 aa7.26□□□□□ -1.25
HDAC2-209ENST00000520895 USH2AO75445 5202 aa7.25□□□□□ -1.25
HDAC2-209ENST00000520895 A8MUN3 132 aa7.24□□□□□ -1.25
HDAC2-209ENST00000520895 TRAV7A0A075B6U4 112 aa7.22□□□□□ -1.25
HDAC2-209ENST00000520895 NDUFC1O43677 76 aa7.17□□□□□ -1.26
HDAC2-209ENST00000520895 SSPOA2VEC9 5147 aa7.16□□□□□ -1.26
HDAC2-209ENST00000520895 DMAC1Q96GE9 116 aa7.1□□□□□ -1.27
HDAC2-209ENST00000520895 SERP2Q8N6R1 65 aa7.07□□□□□ -1.28
HDAC2-209ENST00000520895 SNURFQ9Y675 71 aa7.06□□□□□ -1.28
HDAC2-209ENST00000520895 C20orf197Q8N268 126 aa7.03□□□□□ -1.28
HDAC2-209ENST00000520895 H0YAA0 97 aa7□□□□□ -1.29
HDAC2-209ENST00000520895 ACYP2P14621 99 aa7□□□□□ -1.29
HDAC2-209ENST00000520895 FCGBPQ9Y6R7 5405 aaPredicted RBP7□□□□□ -1.29
HDAC2-209ENST00000520895 KRTAP19-1Q8IUB9 90 aa6.99□□□□□ -1.29
HDAC2-209ENST00000520895 ADM2Q7Z4H4 148 aa6.97□□□□□ -1.29
HDAC2-209ENST00000520895 CRIPTQ9P021 101 aa6.97□□□□□ -1.29
HDAC2-209ENST00000520895 SPRR2GQ9BYE4 73 aa6.95□□□□□ -1.3
HDAC2-209ENST00000520895 SPANXA2-OT1Q8N9U9 137 aa6.93□□□□□ -1.3
HDAC2-209ENST00000520895 CHKB-CPT1BH3BT56 60 aa6.91□□□□□ -1.3
HDAC2-209ENST00000520895 COX7CP15954 63 aa6.91□□□□□ -1.3
HDAC2-209ENST00000520895 KRTAP19-6Q3LI70 58 aa6.91□□□□□ -1.3
HDAC2-209ENST00000520895 SPTSSBQ8NFR3 76 aa6.9□□□□□ -1.3
HDAC2-209ENST00000520895 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.89□□□□□ -1.31
HDAC2-209ENST00000520895 Q5VV11 94 aa6.89□□□□□ -1.31
HDAC2-209ENST00000520895 KRTAP19-8Q3LI54 63 aa6.86□□□□□ -1.31
HDAC2-209ENST00000520895 MT1BP07438 61 aa6.82□□□□□ -1.32
HDAC2-209ENST00000520895 ANAPC13Q9BS18 74 aa6.82□□□□□ -1.32
HDAC2-209ENST00000520895 P0C880 135 aa6.81□□□□□ -1.32
HDAC2-209ENST00000520895 R4GN34 69 aa6.79□□□□□ -1.32
HDAC2-209ENST00000520895 LOC100996750A0A140TA64 210 aa6.75□□□□□ -1.33
HDAC2-209ENST00000520895 KRTAP9-7A8MTY7 169 aa6.75□□□□□ -1.33
HDAC2-209ENST00000520895 KRTAP4-6Q9BYQ5 205 aa6.75□□□□□ -1.33
HDAC2-209ENST00000520895 H7BZZ5 65 aa6.74□□□□□ -1.33
HDAC2-209ENST00000520895 M0QZ58 72 aa6.74□□□□□ -1.33
HDAC2-209ENST00000520895 COA5Q86WW8 74 aa6.73□□□□□ -1.33
HDAC2-209ENST00000520895 CYSTM1Q9H1C7 97 aa6.73□□□□□ -1.33
HDAC2-209ENST00000520895 MACF1Q9UPN3 7388 aaKnown RBP6.73□□□□□ -1.33
HDAC2-209ENST00000520895 A6NN06 94 aa6.71□□□□□ -1.34
HDAC2-209ENST00000520895 SYNE2Q8WXH0 6885 aaKnown RBP6.65□□□□□ -1.34
HDAC2-209ENST00000520895 CCDC179H3BU77 68 aa6.64□□□□□ -1.35
HDAC2-209ENST00000520895 LINC01554Q52M75 96 aa6.64□□□□□ -1.35
HDAC2-209ENST00000520895 PLAC4Q8WY50 150 aa6.64□□□□□ -1.35
HDAC2-209ENST00000520895 KRTAP10-5P60370 271 aa6.63□□□□□ -1.35
HDAC2-209ENST00000520895 SEC61GP60059 68 aa6.57□□□□□ -1.36
HDAC2-209ENST00000520895 PRO2289Q9P1D8 64 aa6.54□□□□□ -1.36
HDAC2-209ENST00000520895 SERP1Q9Y6X1 66 aa6.54□□□□□ -1.36
HDAC2-209ENST00000520895 ATP5EP56381 51 aaPredicted RBP6.51□□□□□ -1.37
HDAC2-209ENST00000520895 KRTAP6-3Q3LI67 103 aa6.48□□□□□ -1.37
HDAC2-209ENST00000520895 MT1XP80297 61 aa6.46□□□□□ -1.38
HDAC2-209ENST00000520895 KRTAP13-4Q3LI77 160 aa6.45□□□□□ -1.38
HDAC2-209ENST00000520895 TMEM258P61165 79 aa6.43□□□□□ -1.38
HDAC2-209ENST00000520895 A0A1B0GU69 56 aa6.41□□□□□ -1.38
HDAC2-209ENST00000520895 A0A1B0GU33 70 aa6.4□□□□□ -1.38
HDAC2-209ENST00000520895 SPATA8Q6RVD6 105 aa6.34□□□□□ -1.39
HDAC2-209ENST00000520895 A0A0D9SG42 100 aa6.32□□□□□ -1.4
HDAC2-209ENST00000520895 CAMK2N1Q7Z7J9 78 aa6.3□□□□□ -1.4
HDAC2-209ENST00000520895 PRR15LQ9BU68 103 aa6.3□□□□□ -1.4
HDAC2-209ENST00000520895 KRTAP5-9P26371 169 aa6.27□□□□□ -1.41
HDAC2-209ENST00000520895 KRTAP12-2P59991 146 aa6.27□□□□□ -1.41
HDAC2-209ENST00000520895 MUC12Q9UKN1 5478 aa6.25□□□□□ -1.41
HDAC2-209ENST00000520895 LINC01558Q9Y6Z2 57 aa6.24□□□□□ -1.41
HDAC2-209ENST00000520895 SMIM26A0A096LP01 95 aa6.23□□□□□ -1.41
HDAC2-209ENST00000520895 SPINT4Q6UDR6 99 aa6.23□□□□□ -1.41
HDAC2-209ENST00000520895 KMT2DO14686 5537 aa6.22□□□□□ -1.41
HDAC2-209ENST00000520895 KRTAP4-8Q9BYQ9 185 aa6.19□□□□□ -1.42
HDAC2-209ENST00000520895 NEBP20929 6669 aa6.19□□□□□ -1.42
HDAC2-209ENST00000520895 KRTAP10-7P60409 375 aaPredicted RBP6.18□□□□□ -1.42
HDAC2-209ENST00000520895 KRTAP8-1Q8IUC2 63 aa6.17□□□□□ -1.42
HDAC2-209ENST00000520895 KRTAP12-1P59990 96 aa6.16□□□□□ -1.42
HDAC2-209ENST00000520895 A8MU10 97 aa6.15□□□□□ -1.42
HDAC2-209ENST00000520895 KRTAP10-12P60413 245 aa6.15□□□□□ -1.42
HDAC2-209ENST00000520895 MDN1Q9NU22 5596 aa6.13□□□□□ -1.43
HDAC2-209ENST00000520895 KRTAP4-8A0A0G2JLE6 195 aa6.11□□□□□ -1.43
HDAC2-209ENST00000520895 SPRR2FQ96RM1 72 aa6.1□□□□□ -1.43
HDAC2-209ENST00000520895 UQCR11O14957 56 aa6.07□□□□□ -1.44
HDAC2-209ENST00000520895 PCP4P48539 62 aa6.06□□□□□ -1.44
HDAC2-209ENST00000520895 V9GYY9 64 aa6.06□□□□□ -1.44
HDAC2-209ENST00000520895 Q1T7F1 81 aa5.99□□□□□ -1.45
HDAC2-209ENST00000520895 PSPHP1O15172 72 aa5.98□□□□□ -1.45
HDAC2-209ENST00000520895 SPRR2EP22531 72 aa5.96□□□□□ -1.46
HDAC2-209ENST00000520895 SPRR2BP35325 72 aa5.96□□□□□ -1.46
HDAC2-209ENST00000520895 SPRR2AP35326 72 aa5.96□□□□□ -1.46
HDAC2-209ENST00000520895 MIR22HGQ0VDD5 57 aa5.96□□□□□ -1.46
HDAC2-209ENST00000520895 KRTAP4-12Q9BQ66 201 aa5.93□□□□□ -1.46
HDAC2-209ENST00000520895 KRTAP20-1Q3LI63 56 aa5.91□□□□□ -1.46
HDAC2-209ENST00000520895 LCE1AQ5T7P2 110 aa5.91□□□□□ -1.46
HDAC2-209ENST00000520895 RPS28P62857 69 aaKnown RBP5.89□□□□□ -1.47
HDAC2-209ENST00000520895 LCE3BQ5TA77 95 aa5.88□□□□□ -1.47
HDAC2-209ENST00000520895 C10orf95Q9H7T3 257 aa5.87□□□□□ -1.47
HDAC2-209ENST00000520895 TNP1P09430 55 aa5.85□□□□□ -1.47
HDAC2-209ENST00000520895 K7ERS5 55 aa5.84□□□□□ -1.47
HDAC2-209ENST00000520895 A6NED7 52 aa5.81□□□□□ -1.48
HDAC2-209ENST00000520895 KRTAP2-3P0C7H8 128 aa5.8□□□□□ -1.48
HDAC2-209ENST00000520895 KRTAP2-4Q9BYR9 128 aa5.8□□□□□ -1.48
HDAC2-209ENST00000520895 KRTAP9-9Q9BYP9 154 aa5.78□□□□□ -1.48
HDAC2-209ENST00000520895 KRTAP9-4Q9BYQ2 154 aa5.78□□□□□ -1.48
HDAC2-209ENST00000520895 KRTAP19-7Q3SYF9 63 aa5.77□□□□□ -1.49
HDAC2-209ENST00000520895 SPRR2DP22532 72 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms