RNA–Protein interactions for RNA: ENST00000519770.1

IGHV3-52-201, Transcript of immunoglobulin heavy variable 3-52 (pseudogene), humanhuman

BASIC

Gene IGHV3-52, Length 353 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-52-201ENST00000519770 MT1HP80294 61 aa8.59□□□□□ -1.03
IGHV3-52-201ENST00000519770 LCA10Q71F78 164 aa8.59□□□□□ -1.03
IGHV3-52-201ENST00000519770 CSAG1Q6PB30 78 aa8.58□□□□□ -1.04
IGHV3-52-201ENST00000519770 COA5Q86WW8 74 aa8.56□□□□□ -1.04
IGHV3-52-201ENST00000519770 FAT4Q6V0I7 4981 aa8.48□□□□□ -1.05
IGHV3-52-201ENST00000519770 KRTAP3-3Q9BYR6 98 aa8.46□□□□□ -1.06
IGHV3-52-201ENST00000519770 SERP1Q9Y6X1 66 aa8.44□□□□□ -1.06
IGHV3-52-201ENST00000519770 FLGP20930 4061 aaPredicted RBP8.44□□□□□ -1.06
IGHV3-52-201ENST00000519770 LCE2AQ5TA79 106 aaPredicted RBP8.43□□□□□ -1.06
IGHV3-52-201ENST00000519770 KRTAP10-6P60371 365 aaPredicted RBP8.34□□□□□ -1.07
IGHV3-52-201ENST00000519770 SEC61GP60059 68 aa8.29□□□□□ -1.08
IGHV3-52-201ENST00000519770 H0YAA0 97 aa8.28□□□□□ -1.08
IGHV3-52-201ENST00000519770 LORP23490 312 aaPredicted RBP8.27□□□□□ -1.09
IGHV3-52-201ENST00000519770 RPS28P62857 69 aaKnown RBP8.26□□□□□ -1.09
IGHV3-52-201ENST00000519770 ADM2Q7Z4H4 148 aa8.25□□□□□ -1.09
IGHV3-52-201ENST00000519770 KRTAP10-10P60014 251 aa8.2□□□□□ -1.1
IGHV3-52-201ENST00000519770 KRTAP9-8Q9BYQ0 159 aa8.2□□□□□ -1.1
IGHV3-52-201ENST00000519770 SMIM26A0A096LP01 95 aa8.19□□□□□ -1.1
IGHV3-52-201ENST00000519770 A0A1B0GU69 56 aa8.18□□□□□ -1.1
IGHV3-52-201ENST00000519770 MT2AP02795 61 aa8.18□□□□□ -1.1
IGHV3-52-201ENST00000519770 PRR15LQ9BU68 103 aa8.18□□□□□ -1.1
IGHV3-52-201ENST00000519770 V9GYY9 64 aa8.17□□□□□ -1.1
IGHV3-52-201ENST00000519770 LINC01558Q9Y6Z2 57 aa8.13□□□□□ -1.11
IGHV3-52-201ENST00000519770 MT1FP04733 61 aa8.11□□□□□ -1.11
IGHV3-52-201ENST00000519770 CRIPTQ9P021 101 aa8.11□□□□□ -1.11
IGHV3-52-201ENST00000519770 P0C880 135 aa8.09□□□□□ -1.11
IGHV3-52-201ENST00000519770 KRTAP3-2Q9BYR7 98 aa8.09□□□□□ -1.11
IGHV3-52-201ENST00000519770 Q1T7F1 81 aa8.06□□□□□ -1.12
IGHV3-52-201ENST00000519770 R4GN34 69 aa8.03□□□□□ -1.12
IGHV3-52-201ENST00000519770 A0A1B0GU33 70 aa7.99□□□□□ -1.13
IGHV3-52-201ENST00000519770 M0QZ58 72 aa7.98□□□□□ -1.13
IGHV3-52-201ENST00000519770 PSPHP1O15172 72 aa7.94□□□□□ -1.14
IGHV3-52-201ENST00000519770 KRTAP9-3Q9BYQ3 159 aa7.93□□□□□ -1.14
IGHV3-52-201ENST00000519770 SPRR2GQ9BYE4 73 aa7.89□□□□□ -1.15
IGHV3-52-201ENST00000519770 UQCR11O14957 56 aa7.87□□□□□ -1.15
IGHV3-52-201ENST00000519770 LINC01554Q52M75 96 aa7.85□□□□□ -1.15
IGHV3-52-201ENST00000519770 LCE2DQ5TA82 110 aaPredicted RBP7.85□□□□□ -1.15
IGHV3-52-201ENST00000519770 Q5VV11 94 aa7.85□□□□□ -1.15
IGHV3-52-201ENST00000519770 KRTAP19-1Q8IUB9 90 aa7.83□□□□□ -1.16
IGHV3-52-201ENST00000519770 SPATA8Q6RVD6 105 aa7.81□□□□□ -1.16
IGHV3-52-201ENST00000519770 A6NED7 52 aa7.77□□□□□ -1.17
IGHV3-52-201ENST00000519770 KRTAP13-4Q3LI77 160 aa7.77□□□□□ -1.17
IGHV3-52-201ENST00000519770 A0A0D9SG42 100 aa7.74□□□□□ -1.17
IGHV3-52-201ENST00000519770 MIR22HGQ0VDD5 57 aa7.74□□□□□ -1.17
IGHV3-52-201ENST00000519770 LCE2BO14633 110 aa7.73□□□□□ -1.17
IGHV3-52-201ENST00000519770 KRTAP19-8Q3LI54 63 aa7.72□□□□□ -1.17
IGHV3-52-201ENST00000519770 PLAC4Q8WY50 150 aa7.72□□□□□ -1.17
IGHV3-52-201ENST00000519770 KRTAP9-2Q9BYQ4 174 aa7.68□□□□□ -1.18
IGHV3-52-201ENST00000519770 A6NN06 94 aa7.67□□□□□ -1.18
IGHV3-52-201ENST00000519770 A8MU10 97 aa7.63□□□□□ -1.19
IGHV3-52-201ENST00000519770 SPINT4Q6UDR6 99 aa7.61□□□□□ -1.19
IGHV3-52-201ENST00000519770 MT1BP07438 61 aa7.59□□□□□ -1.19
IGHV3-52-201ENST00000519770 K7ERS5 55 aa7.58□□□□□ -1.2
IGHV3-52-201ENST00000519770 CAMK2N1Q7Z7J9 78 aa7.53□□□□□ -1.2
IGHV3-52-201ENST00000519770 CDC42SE1Q9NRR8 79 aa7.53□□□□□ -1.2
IGHV3-52-201ENST00000519770 KRTAP12-1P59990 96 aa7.52□□□□□ -1.21
IGHV3-52-201ENST00000519770 KRTAP12-2P59991 146 aa7.48□□□□□ -1.21
IGHV3-52-201ENST00000519770 PRO2289Q9P1D8 64 aa7.45□□□□□ -1.22
IGHV3-52-201ENST00000519770 BRK1Q8WUW1 75 aa7.43□□□□□ -1.22
IGHV3-52-201ENST00000519770 CRCT1Q9UGL9 99 aa7.4□□□□□ -1.22
IGHV3-52-201ENST00000519770 KRTAP19-6Q3LI70 58 aa7.39□□□□□ -1.23
IGHV3-52-201ENST00000519770 USH2AO75445 5202 aa7.39□□□□□ -1.23
IGHV3-52-201ENST00000519770 KRTAP10-5P60370 271 aa7.33□□□□□ -1.24
IGHV3-52-201ENST00000519770 MT1XP80297 61 aa7.29□□□□□ -1.24
IGHV3-52-201ENST00000519770 KRTAP9-6A0A140TA67 174 aa7.24□□□□□ -1.25
IGHV3-52-201ENST00000519770 FSIP2Q5CZC0 6907 aa7.23□□□□□ -1.25
IGHV3-52-201ENST00000519770 SSPOA2VEC9 5147 aa7.18□□□□□ -1.26
IGHV3-52-201ENST00000519770 C10orf95Q9H7T3 257 aa7.12□□□□□ -1.27
IGHV3-52-201ENST00000519770 TNP1P09430 55 aa7.09□□□□□ -1.27
IGHV3-52-201ENST00000519770 PRO0628Q9UI54 55 aa7.09□□□□□ -1.27
IGHV3-52-201ENST00000519770 ROMO1P60602 79 aa7.08□□□□□ -1.28
IGHV3-52-201ENST00000519770 PMAIP1Q13794 54 aa7.04□□□□□ -1.28
IGHV3-52-201ENST00000519770 KRTAP25-1Q3LHN0 102 aa7□□□□□ -1.29
IGHV3-52-201ENST00000519770 KRTAP10-7P60409 375 aaPredicted RBP6.98□□□□□ -1.29
IGHV3-52-201ENST00000519770 FCGBPQ9Y6R7 5405 aaPredicted RBP6.98□□□□□ -1.29
IGHV3-52-201ENST00000519770 KRTAP10-12P60413 245 aa6.94□□□□□ -1.3
IGHV3-52-201ENST00000519770 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.83□□□□□ -1.32
IGHV3-52-201ENST00000519770 KRTAP8-1Q8IUC2 63 aa6.79□□□□□ -1.32
IGHV3-52-201ENST00000519770 KRTAP4-8A0A0G2JLE6 195 aa6.76□□□□□ -1.33
IGHV3-52-201ENST00000519770 KRTAP4-8Q9BYQ9 185 aa6.76□□□□□ -1.33
IGHV3-52-201ENST00000519770 KRTAP23-1A1A580 65 aa6.74□□□□□ -1.33
IGHV3-52-201ENST00000519770 LCE3AQ5TA76 89 aa6.73□□□□□ -1.33
IGHV3-52-201ENST00000519770 PP632Q6XCG6 107 aa6.73□□□□□ -1.33
IGHV3-52-201ENST00000519770 MACF1Q9UPN3 7388 aaKnown RBP6.66□□□□□ -1.34
IGHV3-52-201ENST00000519770 KRTAP6-3Q3LI67 103 aa6.62□□□□□ -1.35
IGHV3-52-201ENST00000519770 KTN1-AS1Q86SY8 53 aa6.62□□□□□ -1.35
IGHV3-52-201ENST00000519770 SPRR2FQ96RM1 72 aa6.58□□□□□ -1.36
IGHV3-52-201ENST00000519770 KRTAP9-7A8MTY7 169 aa6.57□□□□□ -1.36
IGHV3-52-201ENST00000519770 KRTAP19-5Q3LI72 72 aa6.55□□□□□ -1.36
IGHV3-52-201ENST00000519770 KRTAP5-9P26371 169 aa6.54□□□□□ -1.36
IGHV3-52-201ENST00000519770 KMT2DO14686 5537 aa6.53□□□□□ -1.36
IGHV3-52-201ENST00000519770 PRAC1Q96KF2 57 aa6.52□□□□□ -1.37
IGHV3-52-201ENST00000519770 KRTAP12-3P60328 96 aa6.51□□□□□ -1.37
IGHV3-52-201ENST00000519770 KRTAP19-7Q3SYF9 63 aa6.48□□□□□ -1.37
IGHV3-52-201ENST00000519770 MT1EP04732 61 aa6.43□□□□□ -1.38
IGHV3-52-201ENST00000519770 SYNE2Q8WXH0 6885 aaKnown RBP6.42□□□□□ -1.38
IGHV3-52-201ENST00000519770 SPRR2EP22531 72 aa6.34□□□□□ -1.39
IGHV3-52-201ENST00000519770 SPRR2BP35325 72 aa6.34□□□□□ -1.39
IGHV3-52-201ENST00000519770 SPRR2AP35326 72 aa6.34□□□□□ -1.39
IGHV3-52-201ENST00000519770 SVIPQ8NHG7 77 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms