RNA–Protein interactions for RNA: ENST00000519589.1

KCNQ3-203, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 2

Gene KCNQ3, Length 3,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-203ENST00000519589 C9orf92A6NGG3 77 aa4.68□□□□□ -1.66
KCNQ3-203ENST00000519589 FAT2Q9NYQ8 4349 aa4.68□□□□□ -1.66
KCNQ3-203ENST00000519589 KRTAP13-2Q52LG2 175 aa4.67□□□□□ -1.66
KCNQ3-203ENST00000519589 TPRXLQ17RH7 258 aa4.67□□□□□ -1.66
KCNQ3-203ENST00000519589 NDUFAF8A1L188 74 aa4.66□□□□□ -1.66
KCNQ3-203ENST00000519589 PKD1P98161 4303 aa4.64□□□□□ -1.67
KCNQ3-203ENST00000519589 APOBP04114 4563 aaKnown RBP4.64□□□□□ -1.67
KCNQ3-203ENST00000519589 H1FX-AS1Q4G0G2 97 aa4.63□□□□□ -1.67
KCNQ3-203ENST00000519589 MYCBP2O75592 4640 aa4.63□□□□□ -1.67
KCNQ3-203ENST00000519589 A0A1B0GU33 70 aa4.62□□□□□ -1.67
KCNQ3-203ENST00000519589 ABCA13Q86UQ4 5058 aa4.62□□□□□ -1.67
KCNQ3-203ENST00000519589 PCLOQ9Y6V0 5065 aa4.61□□□□□ -1.67
KCNQ3-203ENST00000519589 VPS13BQ7Z7G8 4022 aa4.6□□□□□ -1.67
KCNQ3-203ENST00000519589 K7ERS5 55 aa4.58□□□□□ -1.68
KCNQ3-203ENST00000519589 KRTAP3-1Q9BYR8 98 aa4.57□□□□□ -1.68
KCNQ3-203ENST00000519589 SPINT4Q6UDR6 99 aa4.55□□□□□ -1.68
KCNQ3-203ENST00000519589 LRP1Q07954 4544 aaKnown RBP4.55□□□□□ -1.68
KCNQ3-203ENST00000519589 KRTAP1-4P0C5Y4 121 aa4.55□□□□□ -1.68
KCNQ3-203ENST00000519589 HERC1Q15751 4861 aa4.54□□□□□ -1.68
KCNQ3-203ENST00000519589 COX6B2Q6YFQ2 88 aa4.53□□□□□ -1.68
KCNQ3-203ENST00000519589 FAT3Q8TDW7 4589 aa4.53□□□□□ -1.68
KCNQ3-203ENST00000519589 HSPG2P98160 4391 aa4.53□□□□□ -1.68
KCNQ3-203ENST00000519589 C10orf95Q9H7T3 257 aa4.51□□□□□ -1.69
KCNQ3-203ENST00000519589 KRTAP13-4Q3LI77 160 aa4.48□□□□□ -1.69
KCNQ3-203ENST00000519589 LUZP6Q538Z0 58 aa4.48□□□□□ -1.69
KCNQ3-203ENST00000519589 KRTAP10-4P60372 401 aaPredicted RBP4.45□□□□□ -1.7
KCNQ3-203ENST00000519589 KRTAP10-6P60371 365 aaPredicted RBP4.45□□□□□ -1.7
KCNQ3-203ENST00000519589 A0A0D9SG42 100 aa4.44□□□□□ -1.7
KCNQ3-203ENST00000519589 RPL37P61927 97 aaKnown RBP4.43□□□□□ -1.7
KCNQ3-203ENST00000519589 MT1HL1P0DM35 61 aa4.42□□□□□ -1.7
KCNQ3-203ENST00000519589 KRTAP3-2Q9BYR7 98 aa4.42□□□□□ -1.7
KCNQ3-203ENST00000519589 RPS29P62273 56 aaKnown RBP4.41□□□□□ -1.7
KCNQ3-203ENST00000519589 LRP2P98164 4655 aa4.4□□□□□ -1.7
KCNQ3-203ENST00000519589 KRTAP10-8P60410 259 aa4.38□□□□□ -1.71
KCNQ3-203ENST00000519589 XP32Q5T750 250 aa4.37□□□□□ -1.71
KCNQ3-203ENST00000519589 PKHD1L1Q86WI1 4243 aa4.37□□□□□ -1.71
KCNQ3-203ENST00000519589 UBR4Q5T4S7 5183 aa4.36□□□□□ -1.71
KCNQ3-203ENST00000519589 KRTAP3-3Q9BYR6 98 aa4.36□□□□□ -1.71
KCNQ3-203ENST00000519589 RNF213Q63HN8 5207 aa4.35□□□□□ -1.71
KCNQ3-203ENST00000519589 KRTAP12-2P59991 146 aa4.33□□□□□ -1.72
KCNQ3-203ENST00000519589 S4R3F8 94 aa4.32□□□□□ -1.72
KCNQ3-203ENST00000519589 KRTAP12-1P59990 96 aa4.27□□□□□ -1.73
KCNQ3-203ENST00000519589 TNXBP22105 4242 aa4.23□□□□□ -1.73
KCNQ3-203ENST00000519589 LPAP08519 4548 aa4.23□□□□□ -1.73
KCNQ3-203ENST00000519589 M0R2T5 61 aa4.23□□□□□ -1.73
KCNQ3-203ENST00000519589 CAMK2N1Q7Z7J9 78 aa4.18□□□□□ -1.74
KCNQ3-203ENST00000519589 MUC2Q02817 5179 aa4.18□□□□□ -1.74
KCNQ3-203ENST00000519589 PLAC4Q8WY50 150 aa4.16□□□□□ -1.74
KCNQ3-203ENST00000519589 HMCN2Q8NDA2 5059 aa4.16□□□□□ -1.74
KCNQ3-203ENST00000519589 FSIP2Q5CZC0 6907 aa4.12□□□□□ -1.75
KCNQ3-203ENST00000519589 R4GN34 69 aa4.11□□□□□ -1.75
KCNQ3-203ENST00000519589 M0QZ58 72 aa4.11□□□□□ -1.75
KCNQ3-203ENST00000519589 FAT4Q6V0I7 4981 aa4.05□□□□□ -1.76
KCNQ3-203ENST00000519589 SPRR5A0A1B0GTR4 108 aa3.99□□□□□ -1.77
KCNQ3-203ENST00000519589 KRTAP4-1Q9BYQ7 146 aa3.99□□□□□ -1.77
KCNQ3-203ENST00000519589 KRTAP23-1A1A580 65 aa3.98□□□□□ -1.77
KCNQ3-203ENST00000519589 PRO2289Q9P1D8 64 aa3.9□□□□□ -1.79
KCNQ3-203ENST00000519589 PP632Q6XCG6 107 aa3.87□□□□□ -1.79
KCNQ3-203ENST00000519589 KRTAP10-10P60014 251 aa3.82□□□□□ -1.8
KCNQ3-203ENST00000519589 LORP23490 312 aaPredicted RBP3.81□□□□□ -1.8
KCNQ3-203ENST00000519589 MT1HP80294 61 aa3.78□□□□□ -1.8
KCNQ3-203ENST00000519589 MUC17Q685J3 4493 aa3.75□□□□□ -1.81
KCNQ3-203ENST00000519589 KRTAP9-2Q9BYQ4 174 aa3.75□□□□□ -1.81
KCNQ3-203ENST00000519589 FLGP20930 4061 aaPredicted RBP3.75□□□□□ -1.81
KCNQ3-203ENST00000519589 TNP1P09430 55 aa3.73□□□□□ -1.81
KCNQ3-203ENST00000519589 INE1O15225 51 aa3.72□□□□□ -1.81
KCNQ3-203ENST00000519589 LCE2CQ5TA81 110 aa3.71□□□□□ -1.82
KCNQ3-203ENST00000519589 LCE2AQ5TA79 106 aaPredicted RBP3.7□□□□□ -1.82
KCNQ3-203ENST00000519589 USH2AO75445 5202 aa3.65□□□□□ -1.82
KCNQ3-203ENST00000519589 KRTAP19-2Q3LHN2 52 aa3.65□□□□□ -1.83
KCNQ3-203ENST00000519589 LCE2DQ5TA82 110 aaPredicted RBP3.58□□□□□ -1.84
KCNQ3-203ENST00000519589 KRTAP9-6A0A140TA67 174 aa3.57□□□□□ -1.84
KCNQ3-203ENST00000519589 MT2AP02795 61 aa3.57□□□□□ -1.84
KCNQ3-203ENST00000519589 CRCT1Q9UGL9 99 aa3.57□□□□□ -1.84
KCNQ3-203ENST00000519589 MT1FP04733 61 aa3.57□□□□□ -1.84
KCNQ3-203ENST00000519589 KRTAP9-8Q9BYQ0 159 aa3.51□□□□□ -1.85
KCNQ3-203ENST00000519589 LCE2BO14633 110 aa3.43□□□□□ -1.86
KCNQ3-203ENST00000519589 LCE3AQ5TA76 89 aa3.41□□□□□ -1.86
KCNQ3-203ENST00000519589 SSPOA2VEC9 5147 aa3.41□□□□□ -1.86
KCNQ3-203ENST00000519589 KRTAP10-12P60413 245 aa3.39□□□□□ -1.87
KCNQ3-203ENST00000519589 KRTAP19-1Q8IUB9 90 aa3.39□□□□□ -1.87
KCNQ3-203ENST00000519589 KRTAP9-3Q9BYQ3 159 aa3.39□□□□□ -1.87
KCNQ3-203ENST00000519589 KRTAP8-1Q8IUC2 63 aa3.35□□□□□ -1.87
KCNQ3-203ENST00000519589 SPRR2GQ9BYE4 73 aa3.35□□□□□ -1.87
KCNQ3-203ENST00000519589 SYNE2Q8WXH0 6885 aaKnown RBP3.35□□□□□ -1.87
KCNQ3-203ENST00000519589 FCGBPQ9Y6R7 5405 aaPredicted RBP3.34□□□□□ -1.88
KCNQ3-203ENST00000519589 MACF1Q9UPN3 7388 aaKnown RBP3.32□□□□□ -1.88
KCNQ3-203ENST00000519589 KRTAP9-7A8MTY7 169 aa3.28□□□□□ -1.88
KCNQ3-203ENST00000519589 KRTAP12-3P60328 96 aa3.27□□□□□ -1.89
KCNQ3-203ENST00000519589 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.26□□□□□ -1.89
KCNQ3-203ENST00000519589 MT1BP07438 61 aa3.25□□□□□ -1.89
KCNQ3-203ENST00000519589 KRTAP10-5P60370 271 aa3.24□□□□□ -1.89
KCNQ3-203ENST00000519589 KMT2DO14686 5537 aa3.24□□□□□ -1.89
KCNQ3-203ENST00000519589 KRTAP19-8Q3LI54 63 aa3.18□□□□□ -1.9
KCNQ3-203ENST00000519589 KRTAP19-6Q3LI70 58 aa3.17□□□□□ -1.9
KCNQ3-203ENST00000519589 MT1XP80297 61 aa3.16□□□□□ -1.9
KCNQ3-203ENST00000519589 KRTAP2-3P0C7H8 128 aa3.15□□□□□ -1.9
KCNQ3-203ENST00000519589 SPRR2FQ96RM1 72 aa3.15□□□□□ -1.9
KCNQ3-203ENST00000519589 KRTAP2-4Q9BYR9 128 aa3.15□□□□□ -1.9
KCNQ3-203ENST00000519589 KRTAP2-1Q9BYU5 128 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 287.1 ms