RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 PCLOQ9Y6V0 5065 aa9.28□□□□□ -0.92
FAM49B-214ENST00000519540 H1FX-AS1Q4G0G2 97 aa9.28□□□□□ -0.92
FAM49B-214ENST00000519540 LCA10Q71F78 164 aa9.28□□□□□ -0.92
FAM49B-214ENST00000519540 KRTAP3-3Q9BYR6 98 aa9.28□□□□□ -0.92
FAM49B-214ENST00000519540 RBM12B-AS1Q9P1G2 102 aa9.28□□□□□ -0.92
FAM49B-214ENST00000519540 SEC61GP60059 68 aa9.26□□□□□ -0.93
FAM49B-214ENST00000519540 S4R3F8 94 aa9.26□□□□□ -0.93
FAM49B-214ENST00000519540 A8MU10 97 aa9.26□□□□□ -0.93
FAM49B-214ENST00000519540 KRTAP4-1Q9BYQ7 146 aa9.21□□□□□ -0.93
FAM49B-214ENST00000519540 CDC42SE1Q9NRR8 79 aa9.21□□□□□ -0.93
FAM49B-214ENST00000519540 UQCR11O14957 56 aa9.16□□□□□ -0.94
FAM49B-214ENST00000519540 SVIPQ8NHG7 77 aa9.13□□□□□ -0.95
FAM49B-214ENST00000519540 MUC17Q685J3 4493 aa9.11□□□□□ -0.95
FAM49B-214ENST00000519540 SPATA8Q6RVD6 105 aa9.1□□□□□ -0.95
FAM49B-214ENST00000519540 HERC1Q15751 4861 aa9.1□□□□□ -0.95
FAM49B-214ENST00000519540 MIR22HGQ0VDD5 57 aa9.09□□□□□ -0.95
FAM49B-214ENST00000519540 A0A1B0GU33 70 aa9.05□□□□□ -0.96
FAM49B-214ENST00000519540 HMCN2Q8NDA2 5059 aa9.04□□□□□ -0.96
FAM49B-214ENST00000519540 CSAG1Q6PB30 78 aa9.03□□□□□ -0.96
FAM49B-214ENST00000519540 KRTAP10-6P60371 365 aaPredicted RBP9.02□□□□□ -0.97
FAM49B-214ENST00000519540 KRTAP3-2Q9BYR7 98 aa9.01□□□□□ -0.97
FAM49B-214ENST00000519540 KRTAP19-2Q3LHN2 52 aa9□□□□□ -0.97
FAM49B-214ENST00000519540 H0YAA0 97 aa8.97□□□□□ -0.97
FAM49B-214ENST00000519540 PMAIP1Q13794 54 aa8.93□□□□□ -0.98
FAM49B-214ENST00000519540 P0C880 135 aa8.9□□□□□ -0.98
FAM49B-214ENST00000519540 ADM2Q7Z4H4 148 aa8.9□□□□□ -0.98
FAM49B-214ENST00000519540 MUC2Q02817 5179 aa8.85□□□□□ -0.99
FAM49B-214ENST00000519540 A6NN06 94 aa8.85□□□□□ -0.99
FAM49B-214ENST00000519540 KRTAP13-4Q3LI77 160 aa8.81□□□□□ -1
FAM49B-214ENST00000519540 LCE2CQ5TA81 110 aa8.69□□□□□ -1.02
FAM49B-214ENST00000519540 FLGP20930 4061 aaPredicted RBP8.66□□□□□ -1.02
FAM49B-214ENST00000519540 A0A0D9SG42 100 aa8.66□□□□□ -1.02
FAM49B-214ENST00000519540 M0QZ58 72 aa8.66□□□□□ -1.02
FAM49B-214ENST00000519540 UBR4Q5T4S7 5183 aa8.62□□□□□ -1.03
FAM49B-214ENST00000519540 KTN1-AS1Q86SY8 53 aa8.61□□□□□ -1.03
FAM49B-214ENST00000519540 K7ERS5 55 aa8.59□□□□□ -1.03
FAM49B-214ENST00000519540 RNF213Q63HN8 5207 aa8.57□□□□□ -1.04
FAM49B-214ENST00000519540 LORP23490 312 aaPredicted RBP8.56□□□□□ -1.04
FAM49B-214ENST00000519540 R4GN34 69 aa8.56□□□□□ -1.04
FAM49B-214ENST00000519540 MT1HP80294 61 aa8.48□□□□□ -1.05
FAM49B-214ENST00000519540 KRTAP12-1P59990 96 aa8.47□□□□□ -1.05
FAM49B-214ENST00000519540 KRTAP12-2P59991 146 aa8.47□□□□□ -1.05
FAM49B-214ENST00000519540 FAT4Q6V0I7 4981 aa8.47□□□□□ -1.05
FAM49B-214ENST00000519540 LINC01554Q52M75 96 aa8.43□□□□□ -1.06
FAM49B-214ENST00000519540 SPINT4Q6UDR6 99 aa8.43□□□□□ -1.06
FAM49B-214ENST00000519540 M0R2T5 61 aa8.41□□□□□ -1.06
FAM49B-214ENST00000519540 PRAC1Q96KF2 57 aa8.36□□□□□ -1.07
FAM49B-214ENST00000519540 CRIPTQ9P021 101 aa8.36□□□□□ -1.07
FAM49B-214ENST00000519540 ROMO1P60602 79 aa8.3□□□□□ -1.08
FAM49B-214ENST00000519540 KRTAP9-8Q9BYQ0 159 aa8.22□□□□□ -1.09
FAM49B-214ENST00000519540 MT2AP02795 61 aa8.21□□□□□ -1.1
FAM49B-214ENST00000519540 MT1FP04733 61 aa8.17□□□□□ -1.1
FAM49B-214ENST00000519540 SPRR2GQ9BYE4 73 aa8.16□□□□□ -1.1
FAM49B-214ENST00000519540 KRTAP10-10P60014 251 aa8.15□□□□□ -1.11
FAM49B-214ENST00000519540 KRTAP19-1Q8IUB9 90 aa8.13□□□□□ -1.11
FAM49B-214ENST00000519540 KRTAP25-1Q3LHN0 102 aa8.08□□□□□ -1.12
FAM49B-214ENST00000519540 CAMK2N1Q7Z7J9 78 aa8.04□□□□□ -1.12
FAM49B-214ENST00000519540 C10orf95Q9H7T3 257 aa8.02□□□□□ -1.13
FAM49B-214ENST00000519540 LCE2AQ5TA79 106 aaPredicted RBP7.96□□□□□ -1.13
FAM49B-214ENST00000519540 LCE2DQ5TA82 110 aaPredicted RBP7.95□□□□□ -1.14
FAM49B-214ENST00000519540 PLAC4Q8WY50 150 aa7.93□□□□□ -1.14
FAM49B-214ENST00000519540 KRTAP9-3Q9BYQ3 159 aa7.91□□□□□ -1.14
FAM49B-214ENST00000519540 KRTAP19-8Q3LI54 63 aa7.9□□□□□ -1.14
FAM49B-214ENST00000519540 MT1BP07438 61 aa7.79□□□□□ -1.16
FAM49B-214ENST00000519540 TNP1P09430 55 aa7.69□□□□□ -1.18
FAM49B-214ENST00000519540 LCE2BO14633 110 aa7.66□□□□□ -1.18
FAM49B-214ENST00000519540 KRTAP10-5P60370 271 aa7.6□□□□□ -1.19
FAM49B-214ENST00000519540 MT1XP80297 61 aa7.6□□□□□ -1.19
FAM49B-214ENST00000519540 PP632Q6XCG6 107 aa7.58□□□□□ -1.2
FAM49B-214ENST00000519540 KRTAP23-1A1A580 65 aa7.52□□□□□ -1.21
FAM49B-214ENST00000519540 PRO2289Q9P1D8 64 aa7.44□□□□□ -1.22
FAM49B-214ENST00000519540 LCE3AQ5TA76 89 aa7.34□□□□□ -1.23
FAM49B-214ENST00000519540 USH2AO75445 5202 aa7.33□□□□□ -1.24
FAM49B-214ENST00000519540 KRTAP10-7P60409 375 aaPredicted RBP7.32□□□□□ -1.24
FAM49B-214ENST00000519540 KRTAP10-12P60413 245 aa7.27□□□□□ -1.25
FAM49B-214ENST00000519540 KRTAP15-1Q3LI76 137 aa7.23□□□□□ -1.25
FAM49B-214ENST00000519540 KRTAP8-1Q8IUC2 63 aa7.2□□□□□ -1.26
FAM49B-214ENST00000519540 KRTAP19-6Q3LI70 58 aa7.09□□□□□ -1.27
FAM49B-214ENST00000519540 SSPOA2VEC9 5147 aa7.08□□□□□ -1.28
FAM49B-214ENST00000519540 KRTAP12-3P60328 96 aa7.03□□□□□ -1.28
FAM49B-214ENST00000519540 KRTAP4-8A0A0G2JLE6 195 aa6.98□□□□□ -1.29
FAM49B-214ENST00000519540 KRTAP4-8Q9BYQ9 185 aa6.98□□□□□ -1.29
FAM49B-214ENST00000519540 FSIP2Q5CZC0 6907 aa6.98□□□□□ -1.29
FAM49B-214ENST00000519540 KRTAP9-6A0A140TA67 174 aa6.94□□□□□ -1.3
FAM49B-214ENST00000519540 KRTAP19-5Q3LI72 72 aa6.93□□□□□ -1.3
FAM49B-214ENST00000519540 KMT2DO14686 5537 aa6.88□□□□□ -1.31
FAM49B-214ENST00000519540 SPRR5A0A1B0GTR4 108 aa6.85□□□□□ -1.31
FAM49B-214ENST00000519540 KRTAP9-2Q9BYQ4 174 aa6.83□□□□□ -1.32
FAM49B-214ENST00000519540 KRTAP19-7Q3SYF9 63 aa6.78□□□□□ -1.32
FAM49B-214ENST00000519540 NDUFAF8A1L188 74 aa6.77□□□□□ -1.32
FAM49B-214ENST00000519540 FCGBPQ9Y6R7 5405 aaPredicted RBP6.71□□□□□ -1.33
FAM49B-214ENST00000519540 LUZP6Q538Z0 58 aa6.71□□□□□ -1.33
FAM49B-214ENST00000519540 MT1EP04732 61 aa6.63□□□□□ -1.35
FAM49B-214ENST00000519540 LCE3CQ5T5A8 94 aa6.6□□□□□ -1.35
FAM49B-214ENST00000519540 MT1LQ93083 61 aa6.54□□□□□ -1.36
FAM49B-214ENST00000519540 CRCT1Q9UGL9 99 aa6.52□□□□□ -1.37
FAM49B-214ENST00000519540 KRTAP19-4Q3LI73 84 aa6.5□□□□□ -1.37
FAM49B-214ENST00000519540 MACF1Q9UPN3 7388 aaKnown RBP6.43□□□□□ -1.38
FAM49B-214ENST00000519540 KRTAP4-7Q9BYR0 210 aa6.42□□□□□ -1.38
FAM49B-214ENST00000519540 SPRR2FQ96RM1 72 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms