RNA–Protein interactions for RNA: ENST00000519363.1

PABPC1-210, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-210ENST00000519363 CHKB-CPT1BH3BT56 60 aa7.42□□□□□ -1.22
PABPC1-210ENST00000519363 S4R3F8 94 aa7.4□□□□□ -1.22
PABPC1-210ENST00000519363 FAT4Q6V0I7 4981 aa7.38□□□□□ -1.23
PABPC1-210ENST00000519363 LCA10Q71F78 164 aa7.35□□□□□ -1.23
PABPC1-210ENST00000519363 SPTSSBQ8NFR3 76 aa7.35□□□□□ -1.23
PABPC1-210ENST00000519363 LCE2CQ5TA81 110 aa7.33□□□□□ -1.24
PABPC1-210ENST00000519363 KRTAP3-3Q9BYR6 98 aa7.32□□□□□ -1.24
PABPC1-210ENST00000519363 SMIM26A0A096LP01 95 aa7.31□□□□□ -1.24
PABPC1-210ENST00000519363 CSAG1Q6PB30 78 aa7.24□□□□□ -1.25
PABPC1-210ENST00000519363 V9GYY9 64 aa7.22□□□□□ -1.25
PABPC1-210ENST00000519363 Q1T7F1 81 aa7.21□□□□□ -1.26
PABPC1-210ENST00000519363 LINC01558Q9Y6Z2 57 aa7.2□□□□□ -1.26
PABPC1-210ENST00000519363 MT1HP80294 61 aa7.19□□□□□ -1.26
PABPC1-210ENST00000519363 H0YAA0 97 aa7.12□□□□□ -1.27
PABPC1-210ENST00000519363 A0A1B0GU69 56 aa7.09□□□□□ -1.27
PABPC1-210ENST00000519363 PRR15LQ9BU68 103 aa7.09□□□□□ -1.27
PABPC1-210ENST00000519363 SEC61GP60059 68 aa7.08□□□□□ -1.28
PABPC1-210ENST00000519363 M0R2T5 61 aa7.07□□□□□ -1.28
PABPC1-210ENST00000519363 KRTAP3-2Q9BYR7 98 aa7.04□□□□□ -1.28
PABPC1-210ENST00000519363 PSPHP1O15172 72 aa7.02□□□□□ -1.29
PABPC1-210ENST00000519363 KRTAP10-6P60371 365 aaPredicted RBP7.02□□□□□ -1.29
PABPC1-210ENST00000519363 ADM2Q7Z4H4 148 aa7.02□□□□□ -1.29
PABPC1-210ENST00000519363 LCE2AQ5TA79 106 aaPredicted RBP7.01□□□□□ -1.29
PABPC1-210ENST00000519363 Q5VV11 94 aa7.01□□□□□ -1.29
PABPC1-210ENST00000519363 P0C880 135 aa6.97□□□□□ -1.29
PABPC1-210ENST00000519363 A0A1B0GU33 70 aa6.91□□□□□ -1.3
PABPC1-210ENST00000519363 LORP23490 312 aaPredicted RBP6.91□□□□□ -1.3
PABPC1-210ENST00000519363 KRTAP9-8Q9BYQ0 159 aa6.9□□□□□ -1.3
PABPC1-210ENST00000519363 MT2AP02795 61 aa6.88□□□□□ -1.31
PABPC1-210ENST00000519363 UQCR11O14957 56 aa6.87□□□□□ -1.31
PABPC1-210ENST00000519363 CRIPTQ9P021 101 aa6.86□□□□□ -1.31
PABPC1-210ENST00000519363 A6NED7 52 aa6.84□□□□□ -1.31
PABPC1-210ENST00000519363 M0QZ58 72 aa6.84□□□□□ -1.31
PABPC1-210ENST00000519363 MT1FP04733 61 aa6.83□□□□□ -1.32
PABPC1-210ENST00000519363 KRTAP13-4Q3LI77 160 aa6.8□□□□□ -1.32
PABPC1-210ENST00000519363 KRTAP10-10P60014 251 aa6.79□□□□□ -1.32
PABPC1-210ENST00000519363 R4GN34 69 aa6.79□□□□□ -1.32
PABPC1-210ENST00000519363 MIR22HGQ0VDD5 57 aa6.77□□□□□ -1.33
PABPC1-210ENST00000519363 SPATA8Q6RVD6 105 aa6.77□□□□□ -1.33
PABPC1-210ENST00000519363 CDC42SE1Q9NRR8 79 aa6.74□□□□□ -1.33
PABPC1-210ENST00000519363 SPRR2GQ9BYE4 73 aa6.72□□□□□ -1.33
PABPC1-210ENST00000519363 KRTAP19-1Q8IUB9 90 aa6.68□□□□□ -1.34
PABPC1-210ENST00000519363 BRK1Q8WUW1 75 aa6.67□□□□□ -1.34
PABPC1-210ENST00000519363 KRTAP9-3Q9BYQ3 159 aa6.67□□□□□ -1.34
PABPC1-210ENST00000519363 A8MU10 97 aa6.66□□□□□ -1.34
PABPC1-210ENST00000519363 A0A0D9SG42 100 aa6.63□□□□□ -1.35
PABPC1-210ENST00000519363 A6NN06 94 aa6.62□□□□□ -1.35
PABPC1-210ENST00000519363 LINC01554Q52M75 96 aa6.61□□□□□ -1.35
PABPC1-210ENST00000519363 KRTAP19-8Q3LI54 63 aa6.57□□□□□ -1.36
PABPC1-210ENST00000519363 KRTAP12-1P59990 96 aa6.55□□□□□ -1.36
PABPC1-210ENST00000519363 K7ERS5 55 aa6.51□□□□□ -1.37
PABPC1-210ENST00000519363 KRTAP12-2P59991 146 aa6.51□□□□□ -1.37
PABPC1-210ENST00000519363 PRO0628Q9UI54 55 aa6.5□□□□□ -1.37
PABPC1-210ENST00000519363 LCE2BO14633 110 aa6.48□□□□□ -1.37
PABPC1-210ENST00000519363 SPINT4Q6UDR6 99 aa6.48□□□□□ -1.37
PABPC1-210ENST00000519363 MT1BP07438 61 aa6.46□□□□□ -1.38
PABPC1-210ENST00000519363 USH2AO75445 5202 aa6.45□□□□□ -1.38
PABPC1-210ENST00000519363 PLAC4Q8WY50 150 aa6.43□□□□□ -1.38
PABPC1-210ENST00000519363 LCE2DQ5TA82 110 aaPredicted RBP6.42□□□□□ -1.38
PABPC1-210ENST00000519363 CAMK2N1Q7Z7J9 78 aa6.34□□□□□ -1.39
PABPC1-210ENST00000519363 PMAIP1Q13794 54 aa6.3□□□□□ -1.4
PABPC1-210ENST00000519363 SSPOA2VEC9 5147 aa6.28□□□□□ -1.4
PABPC1-210ENST00000519363 ROMO1P60602 79 aa6.22□□□□□ -1.41
PABPC1-210ENST00000519363 MT1XP80297 61 aa6.22□□□□□ -1.41
PABPC1-210ENST00000519363 KRTAP10-5P60370 271 aa6.2□□□□□ -1.42
PABPC1-210ENST00000519363 C10orf95Q9H7T3 257 aa6.19□□□□□ -1.42
PABPC1-210ENST00000519363 PRO2289Q9P1D8 64 aa6.19□□□□□ -1.42
PABPC1-210ENST00000519363 KRTAP9-2Q9BYQ4 174 aa6.18□□□□□ -1.42
PABPC1-210ENST00000519363 KRTAP19-6Q3LI70 58 aa6.15□□□□□ -1.42
PABPC1-210ENST00000519363 KRTAP9-6A0A140TA67 174 aa6.06□□□□□ -1.44
PABPC1-210ENST00000519363 KRTAP25-1Q3LHN0 102 aa6.06□□□□□ -1.44
PABPC1-210ENST00000519363 KTN1-AS1Q86SY8 53 aa6.05□□□□□ -1.44
PABPC1-210ENST00000519363 FSIP2Q5CZC0 6907 aa6.05□□□□□ -1.44
PABPC1-210ENST00000519363 TNP1P09430 55 aa6.04□□□□□ -1.44
PABPC1-210ENST00000519363 FCGBPQ9Y6R7 5405 aaPredicted RBP5.98□□□□□ -1.45
PABPC1-210ENST00000519363 CRCT1Q9UGL9 99 aa5.95□□□□□ -1.46
PABPC1-210ENST00000519363 KRTAP10-7P60409 375 aaPredicted RBP5.93□□□□□ -1.46
PABPC1-210ENST00000519363 KRTAP10-12P60413 245 aa5.92□□□□□ -1.46
PABPC1-210ENST00000519363 KRTAP23-1A1A580 65 aa5.89□□□□□ -1.47
PABPC1-210ENST00000519363 PRAC1Q96KF2 57 aa5.89□□□□□ -1.47
PABPC1-210ENST00000519363 PP632Q6XCG6 107 aa5.84□□□□□ -1.47
PABPC1-210ENST00000519363 LCE3AQ5TA76 89 aa5.79□□□□□ -1.48
PABPC1-210ENST00000519363 KMT2DO14686 5537 aa5.76□□□□□ -1.49
PABPC1-210ENST00000519363 KRTAP8-1Q8IUC2 63 aa5.71□□□□□ -1.5
PABPC1-210ENST00000519363 KRTAP4-8A0A0G2JLE6 195 aa5.7□□□□□ -1.5
PABPC1-210ENST00000519363 KRTAP4-8Q9BYQ9 185 aa5.7□□□□□ -1.5
PABPC1-210ENST00000519363 SVIPQ8NHG7 77 aa5.67□□□□□ -1.5
PABPC1-210ENST00000519363 MACF1Q9UPN3 7388 aaKnown RBP5.63□□□□□ -1.51
PABPC1-210ENST00000519363 KRTAP12-3P60328 96 aa5.58□□□□□ -1.52
PABPC1-210ENST00000519363 KRTAP19-5Q3LI72 72 aa5.57□□□□□ -1.52
PABPC1-210ENST00000519363 KRTAP19-7Q3SYF9 63 aa5.55□□□□□ -1.52
PABPC1-210ENST00000519363 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.52□□□□□ -1.53
PABPC1-210ENST00000519363 MT1EP04732 61 aa5.47□□□□□ -1.53
PABPC1-210ENST00000519363 KRTAP5-9P26371 169 aa5.45□□□□□ -1.54
PABPC1-210ENST00000519363 KRTAP15-1Q3LI76 137 aa5.44□□□□□ -1.54
PABPC1-210ENST00000519363 SYNE2Q8WXH0 6885 aaKnown RBP5.43□□□□□ -1.54
PABPC1-210ENST00000519363 KRTAP9-7A8MTY7 169 aa5.41□□□□□ -1.54
PABPC1-210ENST00000519363 SPRR2FQ96RM1 72 aa5.41□□□□□ -1.54
PABPC1-210ENST00000519363 MUC12Q9UKN1 5478 aa5.41□□□□□ -1.54
PABPC1-210ENST00000519363 KRTAP6-3Q3LI67 103 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms