RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 FAM236DA0A1B0GTK5 79 aa9.51□□□□□ -0.89
CTNNA1-213ENST00000519113 FAM236CP0DP71 79 aa9.51□□□□□ -0.89
CTNNA1-213ENST00000519113 H7BZZ5 65 aa9.49□□□□□ -0.89
CTNNA1-213ENST00000519113 LOC101927531A0A1B0GV80 90 aa9.48□□□□□ -0.89
CTNNA1-213ENST00000519113 MACF1Q9UPN3 7388 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-213ENST00000519113 TMEM258P61165 79 aa9.47□□□□□ -0.89
CTNNA1-213ENST00000519113 SYNE2Q8WXH0 6885 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-213ENST00000519113 RBM12B-AS1Q9P1G2 102 aa9.43□□□□□ -0.9
CTNNA1-213ENST00000519113 IGKV2-30P06310 120 aa9.4□□□□□ -0.9
CTNNA1-213ENST00000519113 CYP4F30PQ9H0H9 118 aa9.4□□□□□ -0.9
CTNNA1-213ENST00000519113 KRTAP19-6Q3LI70 58 aa9.37□□□□□ -0.91
CTNNA1-213ENST00000519113 MPLKIPQ8TAP9 179 aa9.37□□□□□ -0.91
CTNNA1-213ENST00000519113 ATP5EP56381 51 aaPredicted RBP9.36□□□□□ -0.91
CTNNA1-213ENST00000519113 IGKV2D-30A0A075B6S6 120 aa9.35□□□□□ -0.91
CTNNA1-213ENST00000519113 HRES1P13985 223 aa9.34□□□□□ -0.91
CTNNA1-213ENST00000519113 C7orf65Q6ZTY9 151 aa9.32□□□□□ -0.92
CTNNA1-213ENST00000519113 SPANXA2-OT1Q8N9U9 137 aa9.32□□□□□ -0.92
CTNNA1-213ENST00000519113 KRTAP6-3Q3LI67 103 aa9.27□□□□□ -0.93
CTNNA1-213ENST00000519113 SPINK7P58062 85 aa9.23□□□□□ -0.93
CTNNA1-213ENST00000519113 SERP1Q9Y6X1 66 aa9.19□□□□□ -0.94
CTNNA1-213ENST00000519113 RPS28P62857 69 aaKnown RBP9.16□□□□□ -0.94
CTNNA1-213ENST00000519113 DMAC1Q96GE9 116 aa9.1□□□□□ -0.95
CTNNA1-213ENST00000519113 ACYP2P14621 99 aa9.09□□□□□ -0.95
CTNNA1-213ENST00000519113 C4orf26Q17RF5 130 aa9.09□□□□□ -0.95
CTNNA1-213ENST00000519113 A8MUN3 132 aa9.04□□□□□ -0.96
CTNNA1-213ENST00000519113 COA5Q86WW8 74 aa9.04□□□□□ -0.96
CTNNA1-213ENST00000519113 CHKB-CPT1BH3BT56 60 aa8.97□□□□□ -0.97
CTNNA1-213ENST00000519113 SMIM26A0A096LP01 95 aa8.95□□□□□ -0.98
CTNNA1-213ENST00000519113 KRTAP3-1Q9BYR8 98 aa8.93□□□□□ -0.98
CTNNA1-213ENST00000519113 NEBP20929 6669 aa8.93□□□□□ -0.98
CTNNA1-213ENST00000519113 MUC12Q9UKN1 5478 aa8.84□□□□□ -0.99
CTNNA1-213ENST00000519113 KRTAP20-1Q3LI63 56 aa8.84□□□□□ -0.99
CTNNA1-213ENST00000519113 H1FX-AS1Q4G0G2 97 aa8.82□□□□□ -1
CTNNA1-213ENST00000519113 SPTSSBQ8NFR3 76 aa8.81□□□□□ -1
CTNNA1-213ENST00000519113 V9GYY9 64 aa8.78□□□□□ -1
CTNNA1-213ENST00000519113 A6NN06 94 aa8.77□□□□□ -1.01
CTNNA1-213ENST00000519113 Q1T7F1 81 aa8.76□□□□□ -1.01
CTNNA1-213ENST00000519113 S4R3F8 94 aa8.74□□□□□ -1.01
CTNNA1-213ENST00000519113 LINC01558Q9Y6Z2 57 aa8.69□□□□□ -1.02
CTNNA1-213ENST00000519113 LCA10Q71F78 164 aa8.67□□□□□ -1.02
CTNNA1-213ENST00000519113 KRTAP5-9P26371 169 aa8.61□□□□□ -1.03
CTNNA1-213ENST00000519113 Q5VV11 94 aa8.61□□□□□ -1.03
CTNNA1-213ENST00000519113 PRR15LQ9BU68 103 aa8.61□□□□□ -1.03
CTNNA1-213ENST00000519113 KRTAP3-3Q9BYR6 98 aa8.61□□□□□ -1.03
CTNNA1-213ENST00000519113 PSPHP1O15172 72 aa8.6□□□□□ -1.03
CTNNA1-213ENST00000519113 MT1BP07438 61 aa8.6□□□□□ -1.03
CTNNA1-213ENST00000519113 A0A1B0GU69 56 aa8.58□□□□□ -1.04
CTNNA1-213ENST00000519113 SEC61GP60059 68 aa8.57□□□□□ -1.04
CTNNA1-213ENST00000519113 MDN1Q9NU22 5596 aa8.57□□□□□ -1.04
CTNNA1-213ENST00000519113 KMT2DO14686 5537 aa8.56□□□□□ -1.04
CTNNA1-213ENST00000519113 KRTAP10-5P60370 271 aa8.55□□□□□ -1.04
CTNNA1-213ENST00000519113 CSAG1Q6PB30 78 aa8.55□□□□□ -1.04
CTNNA1-213ENST00000519113 KRTAP19-8Q3LI54 63 aa8.53□□□□□ -1.04
CTNNA1-213ENST00000519113 SPRR2GQ9BYE4 73 aa8.5□□□□□ -1.05
CTNNA1-213ENST00000519113 KRTAP2-3P0C7H8 128 aa8.48□□□□□ -1.05
CTNNA1-213ENST00000519113 KRTAP2-4Q9BYR9 128 aa8.48□□□□□ -1.05
CTNNA1-213ENST00000519113 A6NED7 52 aa8.36□□□□□ -1.07
CTNNA1-213ENST00000519113 ADM2Q7Z4H4 148 aa8.35□□□□□ -1.07
CTNNA1-213ENST00000519113 H0YAA0 97 aa8.33□□□□□ -1.08
CTNNA1-213ENST00000519113 KRTAP3-2Q9BYR7 98 aa8.32□□□□□ -1.08
CTNNA1-213ENST00000519113 A0A1B0GU33 70 aa8.31□□□□□ -1.08
CTNNA1-213ENST00000519113 UQCR11O14957 56 aa8.31□□□□□ -1.08
CTNNA1-213ENST00000519113 BRK1Q8WUW1 75 aa8.26□□□□□ -1.09
CTNNA1-213ENST00000519113 P0C880 135 aa8.25□□□□□ -1.09
CTNNA1-213ENST00000519113 SPRR2EP22531 72 aa8.24□□□□□ -1.09
CTNNA1-213ENST00000519113 SPRR2BP35325 72 aa8.24□□□□□ -1.09
CTNNA1-213ENST00000519113 SPRR2AP35326 72 aa8.24□□□□□ -1.09
CTNNA1-213ENST00000519113 SPRR2FQ96RM1 72 aa8.24□□□□□ -1.09
CTNNA1-213ENST00000519113 MIR22HGQ0VDD5 57 aa8.22□□□□□ -1.09
CTNNA1-213ENST00000519113 CDC42SE1Q9NRR8 79 aa8.2□□□□□ -1.1
CTNNA1-213ENST00000519113 CRIPTQ9P021 101 aa8.2□□□□□ -1.1
CTNNA1-213ENST00000519113 SPATA8Q6RVD6 105 aa8.19□□□□□ -1.1
CTNNA1-213ENST00000519113 KRTAP2-2Q9BYT5 123 aa8.18□□□□□ -1.1
CTNNA1-213ENST00000519113 KRTAP2-1Q9BYU5 128 aa8.18□□□□□ -1.1
CTNNA1-213ENST00000519113 M0QZ58 72 aa8.1□□□□□ -1.11
CTNNA1-213ENST00000519113 A8MU10 97 aa8.07□□□□□ -1.12
CTNNA1-213ENST00000519113 PRO0628Q9UI54 55 aa8.07□□□□□ -1.12
CTNNA1-213ENST00000519113 KRTAP13-4Q3LI77 160 aa8.06□□□□□ -1.12
CTNNA1-213ENST00000519113 PRO2289Q9P1D8 64 aa8.06□□□□□ -1.12
CTNNA1-213ENST00000519113 LCE1AQ5T7P2 110 aa8.05□□□□□ -1.12
CTNNA1-213ENST00000519113 R4GN34 69 aa8.05□□□□□ -1.12
CTNNA1-213ENST00000519113 KRTAP8-1Q8IUC2 63 aa8.04□□□□□ -1.12
CTNNA1-213ENST00000519113 A0A0D9SG42 100 aa7.98□□□□□ -1.13
CTNNA1-213ENST00000519113 SPRR2DP22532 72 aa7.98□□□□□ -1.13
CTNNA1-213ENST00000519113 MT1XP80297 61 aa7.95□□□□□ -1.14
CTNNA1-213ENST00000519113 K7ERS5 55 aa7.91□□□□□ -1.14
CTNNA1-213ENST00000519113 LINC01554Q52M75 96 aa7.9□□□□□ -1.14
CTNNA1-213ENST00000519113 KRTAP12-2P59991 146 aa7.88□□□□□ -1.15
CTNNA1-213ENST00000519113 PLAC4Q8WY50 150 aa7.87□□□□□ -1.15
CTNNA1-213ENST00000519113 PMAIP1Q13794 54 aa7.82□□□□□ -1.16
CTNNA1-213ENST00000519113 SPINT4Q6UDR6 99 aa7.81□□□□□ -1.16
CTNNA1-213ENST00000519113 LCE3BQ5TA77 95 aa7.8□□□□□ -1.16
CTNNA1-213ENST00000519113 KRTAP12-1P59990 96 aa7.78□□□□□ -1.16
CTNNA1-213ENST00000519113 KRTAP4-8A0A0G2JLE6 195 aa7.77□□□□□ -1.17
CTNNA1-213ENST00000519113 KRTAP4-8Q9BYQ9 185 aa7.77□□□□□ -1.17
CTNNA1-213ENST00000519113 GPR98Q8WXG9 6306 aa7.65□□□□□ -1.18
CTNNA1-213ENST00000519113 KRTAP10-7P60409 375 aaPredicted RBP7.56□□□□□ -1.2
CTNNA1-213ENST00000519113 CAMK2N1Q7Z7J9 78 aa7.56□□□□□ -1.2
CTNNA1-213ENST00000519113 KRTAP10-12P60413 245 aa7.55□□□□□ -1.2
CTNNA1-213ENST00000519113 ROMO1P60602 79 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 218.7 ms