RNA–Protein interactions for RNA: ENST00000519106.1

CLDN23-201, Transcript of claudin 23, humanhuman

APPRIS P1 BASIC

Gene CLDN23, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23-201ENST00000519106 XP32Q5T750 250 aa11.27□□□□□ -0.6
CLDN23-201ENST00000519106 SPATA8Q6RVD6 105 aa11.27□□□□□ -0.6
CLDN23-201ENST00000519106 LINC01554Q52M75 96 aa11.26□□□□□ -0.61
CLDN23-201ENST00000519106 DMAC1Q96GE9 116 aa11.26□□□□□ -0.61
CLDN23-201ENST00000519106 A0A1B0GU69 56 aa11.23□□□□□ -0.61
CLDN23-201ENST00000519106 ADM2Q7Z4H4 148 aa11.23□□□□□ -0.61
CLDN23-201ENST00000519106 LPAP08519 4548 aa11.21□□□□□ -0.61
CLDN23-201ENST00000519106 HERC1Q15751 4861 aa11.17□□□□□ -0.62
CLDN23-201ENST00000519106 RPL37P61927 97 aaKnown RBP11.17□□□□□ -0.62
CLDN23-201ENST00000519106 MIR22HGQ0VDD5 57 aa11.14□□□□□ -0.63
CLDN23-201ENST00000519106 UQCR11O14957 56 aa11.14□□□□□ -0.63
CLDN23-201ENST00000519106 LRP2P98164 4655 aa11.09□□□□□ -0.63
CLDN23-201ENST00000519106 IGKV2D-30A0A075B6S6 120 aa11.09□□□□□ -0.63
CLDN23-201ENST00000519106 IGKV2-30P06310 120 aa11.09□□□□□ -0.63
CLDN23-201ENST00000519106 H3BS24 57 aa10.96□□□□□ -0.66
CLDN23-201ENST00000519106 CSAG1Q6PB30 78 aa10.96□□□□□ -0.66
CLDN23-201ENST00000519106 HMCN2Q8NDA2 5059 aa10.93□□□□□ -0.66
CLDN23-201ENST00000519106 SEC61BP60468 96 aaKnown RBP10.9□□□□□ -0.66
CLDN23-201ENST00000519106 KRTAP4-1Q9BYQ7 146 aa10.72□□□□□ -0.69
CLDN23-201ENST00000519106 MUC17Q685J3 4493 aa10.66□□□□□ -0.7
CLDN23-201ENST00000519106 KRTAP25-1Q3LHN0 102 aa10.65□□□□□ -0.71
CLDN23-201ENST00000519106 KRTAP3-1Q9BYR8 98 aa10.64□□□□□ -0.71
CLDN23-201ENST00000519106 COX6B2Q6YFQ2 88 aa10.63□□□□□ -0.71
CLDN23-201ENST00000519106 MUC2Q02817 5179 aa10.63□□□□□ -0.71
CLDN23-201ENST00000519106 H0YAA0 97 aa10.59□□□□□ -0.71
CLDN23-201ENST00000519106 UBR4Q5T4S7 5183 aa10.57□□□□□ -0.72
CLDN23-201ENST00000519106 ROMO1P60602 79 aa10.54□□□□□ -0.72
CLDN23-201ENST00000519106 A0A1B0GU33 70 aa10.47□□□□□ -0.73
CLDN23-201ENST00000519106 H1FX-AS1Q4G0G2 97 aa10.43□□□□□ -0.74
CLDN23-201ENST00000519106 RNF213Q63HN8 5207 aa10.39□□□□□ -0.75
CLDN23-201ENST00000519106 KRTAP19-2Q3LHN2 52 aa10.36□□□□□ -0.75
CLDN23-201ENST00000519106 K7ERS5 55 aa10.34□□□□□ -0.75
CLDN23-201ENST00000519106 S4R3F8 94 aa10.33□□□□□ -0.76
CLDN23-201ENST00000519106 KRTAP3-3Q9BYR6 98 aa10.26□□□□□ -0.77
CLDN23-201ENST00000519106 P0C880 135 aa10.2□□□□□ -0.78
CLDN23-201ENST00000519106 LCE2CQ5TA81 110 aa10.18□□□□□ -0.78
CLDN23-201ENST00000519106 CRIPTQ9P021 101 aa10.16□□□□□ -0.78
CLDN23-201ENST00000519106 FLGP20930 4061 aaPredicted RBP10.14□□□□□ -0.79
CLDN23-201ENST00000519106 FAT4Q6V0I7 4981 aa10.12□□□□□ -0.79
CLDN23-201ENST00000519106 MT1HP80294 61 aa9.99□□□□□ -0.81
CLDN23-201ENST00000519106 SPINT4Q6UDR6 99 aa9.98□□□□□ -0.81
CLDN23-201ENST00000519106 M0R2T5 61 aa9.95□□□□□ -0.82
CLDN23-201ENST00000519106 KRTAP10-6P60371 365 aaPredicted RBP9.9□□□□□ -0.82
CLDN23-201ENST00000519106 KRTAP3-2Q9BYR7 98 aa9.87□□□□□ -0.83
CLDN23-201ENST00000519106 KRTAP13-4Q3LI77 160 aa9.85□□□□□ -0.83
CLDN23-201ENST00000519106 KRTAP15-1Q3LI76 137 aa9.84□□□□□ -0.83
CLDN23-201ENST00000519106 A0A0D9SG42 100 aa9.81□□□□□ -0.84
CLDN23-201ENST00000519106 C10orf95Q9H7T3 257 aa9.76□□□□□ -0.85
CLDN23-201ENST00000519106 NDUFAF8A1L188 74 aa9.75□□□□□ -0.85
CLDN23-201ENST00000519106 LCE2AQ5TA79 106 aaPredicted RBP9.66□□□□□ -0.86
CLDN23-201ENST00000519106 LORP23490 312 aaPredicted RBP9.63□□□□□ -0.87
CLDN23-201ENST00000519106 KRTAP9-8Q9BYQ0 159 aa9.61□□□□□ -0.87
CLDN23-201ENST00000519106 KRTAP12-2P59991 146 aa9.6□□□□□ -0.87
CLDN23-201ENST00000519106 MT2AP02795 61 aa9.57□□□□□ -0.88
CLDN23-201ENST00000519106 R4GN34 69 aa9.54□□□□□ -0.88
CLDN23-201ENST00000519106 M0QZ58 72 aa9.52□□□□□ -0.89
CLDN23-201ENST00000519106 MT1FP04733 61 aa9.52□□□□□ -0.89
CLDN23-201ENST00000519106 KRTAP12-1P59990 96 aa9.52□□□□□ -0.89
CLDN23-201ENST00000519106 KRTAP10-10P60014 251 aa9.52□□□□□ -0.89
CLDN23-201ENST00000519106 KRTAP19-1Q8IUB9 90 aa9.31□□□□□ -0.92
CLDN23-201ENST00000519106 SPRR2GQ9BYE4 73 aa9.3□□□□□ -0.92
CLDN23-201ENST00000519106 KRTAP9-3Q9BYQ3 159 aa9.26□□□□□ -0.93
CLDN23-201ENST00000519106 PLAC4Q8WY50 150 aa9.13□□□□□ -0.95
CLDN23-201ENST00000519106 A0A0A0MQY5 61 aa9.12□□□□□ -0.95
CLDN23-201ENST00000519106 KRTAP19-8Q3LI54 63 aa9.05□□□□□ -0.96
CLDN23-201ENST00000519106 LCE2BO14633 110 aa9.05□□□□□ -0.96
CLDN23-201ENST00000519106 LUZP6Q538Z0 58 aa9.05□□□□□ -0.96
CLDN23-201ENST00000519106 MT1BP07438 61 aa8.97□□□□□ -0.97
CLDN23-201ENST00000519106 CAMK2N1Q7Z7J9 78 aa8.93□□□□□ -0.98
CLDN23-201ENST00000519106 PP632Q6XCG6 107 aa8.87□□□□□ -0.99
CLDN23-201ENST00000519106 USH2AO75445 5202 aa8.82□□□□□ -1
CLDN23-201ENST00000519106 LCE2DQ5TA82 110 aaPredicted RBP8.78□□□□□ -1
CLDN23-201ENST00000519106 FSIP2Q5CZC0 6907 aa8.69□□□□□ -1.02
CLDN23-201ENST00000519106 MT1XP80297 61 aa8.67□□□□□ -1.02
CLDN23-201ENST00000519106 KRTAP10-5P60370 271 aa8.65□□□□□ -1.02
CLDN23-201ENST00000519106 PRO2289Q9P1D8 64 aa8.58□□□□□ -1.04
CLDN23-201ENST00000519106 KRTAP9-2Q9BYQ4 174 aa8.56□□□□□ -1.04
CLDN23-201ENST00000519106 SSPOA2VEC9 5147 aa8.55□□□□□ -1.04
CLDN23-201ENST00000519106 SPRR5A0A1B0GTR4 108 aa8.48□□□□□ -1.05
CLDN23-201ENST00000519106 KRTAP23-1A1A580 65 aa8.47□□□□□ -1.05
CLDN23-201ENST00000519106 KRTAP19-6Q3LI70 58 aa8.46□□□□□ -1.05
CLDN23-201ENST00000519106 TNP1P09430 55 aa8.45□□□□□ -1.06
CLDN23-201ENST00000519106 KRTAP10-7P60409 375 aaPredicted RBP8.34□□□□□ -1.07
CLDN23-201ENST00000519106 CRCT1Q9UGL9 99 aa8.24□□□□□ -1.09
CLDN23-201ENST00000519106 FCGBPQ9Y6R7 5405 aaPredicted RBP8.23□□□□□ -1.09
CLDN23-201ENST00000519106 KRTAP10-12P60413 245 aa8.19□□□□□ -1.1
CLDN23-201ENST00000519106 LCE3AQ5TA76 89 aa8.13□□□□□ -1.11
CLDN23-201ENST00000519106 KMT2DO14686 5537 aa8.12□□□□□ -1.11
CLDN23-201ENST00000519106 KRTAP4-8A0A0G2JLE6 195 aa8.07□□□□□ -1.12
CLDN23-201ENST00000519106 KRTAP4-8Q9BYQ9 185 aa8.07□□□□□ -1.12
CLDN23-201ENST00000519106 INE1O15225 51 aa7.95□□□□□ -1.14
CLDN23-201ENST00000519106 KRTAP8-1Q8IUC2 63 aa7.91□□□□□ -1.14
CLDN23-201ENST00000519106 KRTAP9-6A0A140TA67 174 aa7.91□□□□□ -1.14
CLDN23-201ENST00000519106 MACF1Q9UPN3 7388 aaKnown RBP7.9□□□□□ -1.15
CLDN23-201ENST00000519106 KRTAP19-5Q3LI72 72 aa7.83□□□□□ -1.16
CLDN23-201ENST00000519106 KRTAP12-3P60328 96 aa7.8□□□□□ -1.16
CLDN23-201ENST00000519106 KRTAP19-7Q3SYF9 63 aa7.73□□□□□ -1.17
CLDN23-201ENST00000519106 SYNE2Q8WXH0 6885 aaKnown RBP7.7□□□□□ -1.18
CLDN23-201ENST00000519106 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.61□□□□□ -1.19
CLDN23-201ENST00000519106 MT1EP04732 61 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms