RNA–Protein interactions for RNA: ENST00000518290.1

ARFGEF1-204, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 3,179 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-204ENST00000518290 IGKV2D-30A0A075B6S6 120 aa4.32□□□□□ -1.72
ARFGEF1-204ENST00000518290 CSAG1Q6PB30 78 aa4.3□□□□□ -1.72
ARFGEF1-204ENST00000518290 ACYP2P14621 99 aa4.29□□□□□ -1.72
ARFGEF1-204ENST00000518290 RETNLBQ9BQ08 111 aa4.28□□□□□ -1.72
ARFGEF1-204ENST00000518290 SPATA8Q6RVD6 105 aa4.28□□□□□ -1.72
ARFGEF1-204ENST00000518290 KIAA1109Q2LD37 5005 aa4.28□□□□□ -1.72
ARFGEF1-204ENST00000518290 RPL37P61927 97 aaKnown RBP4.27□□□□□ -1.73
ARFGEF1-204ENST00000518290 XP32Q5T750 250 aa4.27□□□□□ -1.73
ARFGEF1-204ENST00000518290 TPRXLQ17RH7 258 aa4.25□□□□□ -1.73
ARFGEF1-204ENST00000518290 HERC2O95714 4834 aa4.24□□□□□ -1.73
ARFGEF1-204ENST00000518290 MYCBP2O75592 4640 aa4.24□□□□□ -1.73
ARFGEF1-204ENST00000518290 MUC17Q685J3 4493 aa4.23□□□□□ -1.73
ARFGEF1-204ENST00000518290 A0A1B0GU69 56 aa4.23□□□□□ -1.73
ARFGEF1-204ENST00000518290 MIR22HGQ0VDD5 57 aa4.23□□□□□ -1.73
ARFGEF1-204ENST00000518290 C9orf92A6NGG3 77 aa4.22□□□□□ -1.73
ARFGEF1-204ENST00000518290 KRTAP3-1Q9BYR8 98 aa4.21□□□□□ -1.74
ARFGEF1-204ENST00000518290 LCE2AQ5TA79 106 aaPredicted RBP4.21□□□□□ -1.74
ARFGEF1-204ENST00000518290 BIRC6Q9NR09 4857 aa4.21□□□□□ -1.74
ARFGEF1-204ENST00000518290 UQCR11O14957 56 aa4.19□□□□□ -1.74
ARFGEF1-204ENST00000518290 A0A0A0MQY5 61 aa4.18□□□□□ -1.74
ARFGEF1-204ENST00000518290 KRTAP4-5Q9BYR2 181 aa4.18□□□□□ -1.74
ARFGEF1-204ENST00000518290 ABCA13Q86UQ4 5058 aa4.17□□□□□ -1.74
ARFGEF1-204ENST00000518290 ROMO1P60602 79 aa4.17□□□□□ -1.74
ARFGEF1-204ENST00000518290 COX6B2Q6YFQ2 88 aa4.16□□□□□ -1.74
ARFGEF1-204ENST00000518290 KRTAP25-1Q3LHN0 102 aa4.12□□□□□ -1.75
ARFGEF1-204ENST00000518290 P0C880 135 aa4.1□□□□□ -1.75
ARFGEF1-204ENST00000518290 KRTAP4-8Q9BYQ9 185 aa4.05□□□□□ -1.76
ARFGEF1-204ENST00000518290 H0YAA0 97 aa4.04□□□□□ -1.76
ARFGEF1-204ENST00000518290 LRP2P98164 4655 aa4.03□□□□□ -1.76
ARFGEF1-204ENST00000518290 LPAP08519 4548 aa4.03□□□□□ -1.76
ARFGEF1-204ENST00000518290 CRIPTQ9P021 101 aa4.03□□□□□ -1.76
ARFGEF1-204ENST00000518290 KRTAP19-2Q3LHN2 52 aa4.02□□□□□ -1.77
ARFGEF1-204ENST00000518290 H1FX-AS1Q4G0G2 97 aa4.02□□□□□ -1.77
ARFGEF1-204ENST00000518290 SEC61BP60468 96 aaKnown RBP4.01□□□□□ -1.77
ARFGEF1-204ENST00000518290 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.99□□□□□ -1.77
ARFGEF1-204ENST00000518290 S4R3F8 94 aa3.98□□□□□ -1.77
ARFGEF1-204ENST00000518290 KRTAP9-2Q9BYQ4 174 aa3.98□□□□□ -1.77
ARFGEF1-204ENST00000518290 KRTAP9-6A0A140TA67 174 aa3.97□□□□□ -1.77
ARFGEF1-204ENST00000518290 KRTAP10-6P60371 365 aaPredicted RBP3.96□□□□□ -1.78
ARFGEF1-204ENST00000518290 KRTAP4-1Q9BYQ7 146 aa3.95□□□□□ -1.78
ARFGEF1-204ENST00000518290 PCLOQ9Y6V0 5065 aa3.95□□□□□ -1.78
ARFGEF1-204ENST00000518290 HMCN2Q8NDA2 5059 aa3.94□□□□□ -1.78
ARFGEF1-204ENST00000518290 DMBT1Q9UGM3 2413 aaPredicted RBP3.94□□□□□ -1.78
ARFGEF1-204ENST00000518290 A0A1B0GU33 70 aa3.92□□□□□ -1.78
ARFGEF1-204ENST00000518290 NDUFAF8A1L188 74 aa3.91□□□□□ -1.78
ARFGEF1-204ENST00000518290 FLGP20930 4061 aaPredicted RBP3.91□□□□□ -1.78
ARFGEF1-204ENST00000518290 LCE2CQ5TA81 110 aa3.9□□□□□ -1.79
ARFGEF1-204ENST00000518290 HERC1Q15751 4861 aa3.88□□□□□ -1.79
ARFGEF1-204ENST00000518290 SPINT4Q6UDR6 99 aa3.88□□□□□ -1.79
ARFGEF1-204ENST00000518290 LCE3BQ5TA77 95 aa3.88□□□□□ -1.79
ARFGEF1-204ENST00000518290 LORP23490 312 aaPredicted RBP3.87□□□□□ -1.79
ARFGEF1-204ENST00000518290 KRTAP15-1Q3LI76 137 aa3.87□□□□□ -1.79
ARFGEF1-204ENST00000518290 KRTAP13-4Q3LI77 160 aa3.82□□□□□ -1.8
ARFGEF1-204ENST00000518290 C10orf95Q9H7T3 257 aa3.82□□□□□ -1.8
ARFGEF1-204ENST00000518290 K7ERS5 55 aa3.81□□□□□ -1.8
ARFGEF1-204ENST00000518290 M0QZ58 72 aa3.8□□□□□ -1.8
ARFGEF1-204ENST00000518290 KRTAP4-8A0A0G2JLE6 195 aa3.8□□□□□ -1.8
ARFGEF1-204ENST00000518290 KRTAP9-9Q9BYP9 154 aa3.77□□□□□ -1.81
ARFGEF1-204ENST00000518290 KRTAP9-4Q9BYQ2 154 aa3.77□□□□□ -1.81
ARFGEF1-204ENST00000518290 KRTAP4-12Q9BQ66 201 aa3.73□□□□□ -1.81
ARFGEF1-204ENST00000518290 A0A0D9SG42 100 aa3.72□□□□□ -1.81
ARFGEF1-204ENST00000518290 KRTAP12-1P59990 96 aa3.7□□□□□ -1.82
ARFGEF1-204ENST00000518290 KRTAP4-7Q9BYR0 210 aa3.69□□□□□ -1.82
ARFGEF1-204ENST00000518290 KRTAP12-2P59991 146 aa3.67□□□□□ -1.82
ARFGEF1-204ENST00000518290 MT1HP80294 61 aa3.67□□□□□ -1.82
ARFGEF1-204ENST00000518290 LUZP6Q538Z0 58 aa3.65□□□□□ -1.83
ARFGEF1-204ENST00000518290 RNF213Q63HN8 5207 aa3.64□□□□□ -1.83
ARFGEF1-204ENST00000518290 MUC2Q02817 5179 aa3.63□□□□□ -1.83
ARFGEF1-204ENST00000518290 SPRR2GQ9BYE4 73 aa3.62□□□□□ -1.83
ARFGEF1-204ENST00000518290 LCE1DQ5T752 114 aa3.61□□□□□ -1.83
ARFGEF1-204ENST00000518290 R4GN34 69 aa3.61□□□□□ -1.83
ARFGEF1-204ENST00000518290 KRTAP9-8Q9BYQ0 159 aa3.58□□□□□ -1.84
ARFGEF1-204ENST00000518290 UBR4Q5T4S7 5183 aa3.57□□□□□ -1.84
ARFGEF1-204ENST00000518290 KRTAP19-1Q8IUB9 90 aa3.55□□□□□ -1.84
ARFGEF1-204ENST00000518290 FAT4Q6V0I7 4981 aa3.55□□□□□ -1.84
ARFGEF1-204ENST00000518290 MT2AP02795 61 aa3.55□□□□□ -1.84
ARFGEF1-204ENST00000518290 KRTAP19-8Q3LI54 63 aa3.53□□□□□ -1.84
ARFGEF1-204ENST00000518290 KRTAP4-9Q9BYQ8 210 aa3.53□□□□□ -1.84
ARFGEF1-204ENST00000518290 KRTAP4-2Q9BYR5 136 aa3.52□□□□□ -1.85
ARFGEF1-204ENST00000518290 MT1FP04733 61 aa3.51□□□□□ -1.85
ARFGEF1-204ENST00000518290 PLAC4Q8WY50 150 aa3.5□□□□□ -1.85
ARFGEF1-204ENST00000518290 KRTAP23-1A1A580 65 aa3.47□□□□□ -1.85
ARFGEF1-204ENST00000518290 KRTAP9-3Q9BYQ3 159 aa3.46□□□□□ -1.86
ARFGEF1-204ENST00000518290 MT1BP07438 61 aa3.41□□□□□ -1.86
ARFGEF1-204ENST00000518290 KRTAP5-3Q6L8H2 238 aa3.4□□□□□ -1.86
ARFGEF1-204ENST00000518290 M0R2T5 61 aa3.4□□□□□ -1.87
ARFGEF1-204ENST00000518290 KRTAP10-10P60014 251 aa3.39□□□□□ -1.87
ARFGEF1-204ENST00000518290 PP632Q6XCG6 107 aa3.39□□□□□ -1.87
ARFGEF1-204ENST00000518290 KRTAP4-11Q9BYQ6 195 aa3.35□□□□□ -1.87
ARFGEF1-204ENST00000518290 CAMK2N1Q7Z7J9 78 aa3.34□□□□□ -1.88
ARFGEF1-204ENST00000518290 KRTAP10-5P60370 271 aa3.33□□□□□ -1.88
ARFGEF1-204ENST00000518290 MT1XP80297 61 aa3.32□□□□□ -1.88
ARFGEF1-204ENST00000518290 TNP1P09430 55 aa3.3□□□□□ -1.88
ARFGEF1-204ENST00000518290 SPRR5A0A1B0GTR4 108 aa3.21□□□□□ -1.9
ARFGEF1-204ENST00000518290 KRTAP10-12P60413 245 aa3.21□□□□□ -1.9
ARFGEF1-204ENST00000518290 KRTAP8-1Q8IUC2 63 aa3.21□□□□□ -1.9
ARFGEF1-204ENST00000518290 PRO2289Q9P1D8 64 aa3.2□□□□□ -1.9
ARFGEF1-204ENST00000518290 LCE3AQ5TA76 89 aa3.15□□□□□ -1.9
ARFGEF1-204ENST00000518290 KRTAP10-7P60409 375 aaPredicted RBP3.14□□□□□ -1.91
ARFGEF1-204ENST00000518290 KRTAP19-6Q3LI70 58 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms