RNA–Protein interactions for RNA: ENST00000517880.1

CPEB4-203, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-203ENST00000517880 RYR3Q15413 4870 aa5.77□□□□□ -1.49
CPEB4-203ENST00000517880 ATP11AUNQ6ZP68 121 aa5.76□□□□□ -1.49
CPEB4-203ENST00000517880 CHKB-CPT1BH3BT56 60 aa5.74□□□□□ -1.49
CPEB4-203ENST00000517880 RPL37P61927 97 aaKnown RBP5.74□□□□□ -1.49
CPEB4-203ENST00000517880 RYR1P21817 5038 aa5.74□□□□□ -1.49
CPEB4-203ENST00000517880 SPINK7P58062 85 aa5.74□□□□□ -1.49
CPEB4-203ENST00000517880 LINC01558Q9Y6Z2 57 aa5.72□□□□□ -1.49
CPEB4-203ENST00000517880 TPRXLQ17RH7 258 aa5.69□□□□□ -1.5
CPEB4-203ENST00000517880 TNXBP22105 4242 aa5.69□□□□□ -1.5
CPEB4-203ENST00000517880 DMBT1Q9UGM3 2413 aaPredicted RBP5.67□□□□□ -1.5
CPEB4-203ENST00000517880 PSPHP1O15172 72 aa5.66□□□□□ -1.5
CPEB4-203ENST00000517880 SPTSSBQ8NFR3 76 aa5.66□□□□□ -1.5
CPEB4-203ENST00000517880 PRR15LQ9BU68 103 aa5.65□□□□□ -1.5
CPEB4-203ENST00000517880 LRP1Q07954 4544 aaKnown RBP5.65□□□□□ -1.5
CPEB4-203ENST00000517880 COX6B2Q6YFQ2 88 aa5.65□□□□□ -1.51
CPEB4-203ENST00000517880 FAT3Q8TDW7 4589 aa5.65□□□□□ -1.51
CPEB4-203ENST00000517880 Q5VV11 94 aa5.64□□□□□ -1.51
CPEB4-203ENST00000517880 KIAA1109Q2LD37 5005 aa5.63□□□□□ -1.51
CPEB4-203ENST00000517880 KRTAP3-1Q9BYR8 98 aa5.59□□□□□ -1.51
CPEB4-203ENST00000517880 BRK1Q8WUW1 75 aa5.58□□□□□ -1.52
CPEB4-203ENST00000517880 PRO0628Q9UI54 55 aa5.58□□□□□ -1.52
CPEB4-203ENST00000517880 A0A1B0GU69 56 aa5.57□□□□□ -1.52
CPEB4-203ENST00000517880 EPPK1P58107 5090 aaKnown RBP5.56□□□□□ -1.52
CPEB4-203ENST00000517880 A6NED7 52 aa5.53□□□□□ -1.52
CPEB4-203ENST00000517880 SEC61GP60059 68 aa5.53□□□□□ -1.52
CPEB4-203ENST00000517880 SEC61BP60468 96 aaKnown RBP5.52□□□□□ -1.53
CPEB4-203ENST00000517880 SVIPQ8NHG7 77 aa5.52□□□□□ -1.53
CPEB4-203ENST00000517880 CDC42SE1Q9NRR8 79 aa5.48□□□□□ -1.53
CPEB4-203ENST00000517880 MYCBP2O75592 4640 aa5.48□□□□□ -1.53
CPEB4-203ENST00000517880 RBM12B-AS1Q9P1G2 102 aa5.48□□□□□ -1.53
CPEB4-203ENST00000517880 H1FX-AS1Q4G0G2 97 aa5.47□□□□□ -1.53
CPEB4-203ENST00000517880 UQCR11O14957 56 aa5.45□□□□□ -1.54
CPEB4-203ENST00000517880 LCA10Q71F78 164 aa5.44□□□□□ -1.54
CPEB4-203ENST00000517880 S4R3F8 94 aa5.44□□□□□ -1.54
CPEB4-203ENST00000517880 SPATA8Q6RVD6 105 aa5.41□□□□□ -1.54
CPEB4-203ENST00000517880 BIRC6Q9NR09 4857 aa5.39□□□□□ -1.55
CPEB4-203ENST00000517880 MIR22HGQ0VDD5 57 aa5.38□□□□□ -1.55
CPEB4-203ENST00000517880 A0A1B0GU33 70 aa5.35□□□□□ -1.55
CPEB4-203ENST00000517880 HERC2O95714 4834 aa5.35□□□□□ -1.55
CPEB4-203ENST00000517880 A8MU10 97 aa5.34□□□□□ -1.55
CPEB4-203ENST00000517880 H3BS24 57 aa5.34□□□□□ -1.55
CPEB4-203ENST00000517880 CSAG1Q6PB30 78 aa5.33□□□□□ -1.56
CPEB4-203ENST00000517880 PMAIP1Q13794 54 aa5.31□□□□□ -1.56
CPEB4-203ENST00000517880 ABCA13Q86UQ4 5058 aa5.28□□□□□ -1.56
CPEB4-203ENST00000517880 LRP2P98164 4655 aa5.27□□□□□ -1.57
CPEB4-203ENST00000517880 KRTAP10-6P60371 365 aaPredicted RBP5.26□□□□□ -1.57
CPEB4-203ENST00000517880 KRTAP4-1Q9BYQ7 146 aa5.26□□□□□ -1.57
CPEB4-203ENST00000517880 H0YAA0 97 aa5.25□□□□□ -1.57
CPEB4-203ENST00000517880 LPAP08519 4548 aa5.24□□□□□ -1.57
CPEB4-203ENST00000517880 A6NN06 94 aa5.23□□□□□ -1.57
CPEB4-203ENST00000517880 ADM2Q7Z4H4 148 aa5.21□□□□□ -1.58
CPEB4-203ENST00000517880 KRTAP19-2Q3LHN2 52 aa5.19□□□□□ -1.58
CPEB4-203ENST00000517880 K7ERS5 55 aa5.16□□□□□ -1.58
CPEB4-203ENST00000517880 P0C880 135 aa5.16□□□□□ -1.58
CPEB4-203ENST00000517880 M0QZ58 72 aa5.15□□□□□ -1.58
CPEB4-203ENST00000517880 MUC17Q685J3 4493 aa5.15□□□□□ -1.58
CPEB4-203ENST00000517880 PCLOQ9Y6V0 5065 aa5.14□□□□□ -1.59
CPEB4-203ENST00000517880 KTN1-AS1Q86SY8 53 aa5.14□□□□□ -1.59
CPEB4-203ENST00000517880 KRTAP13-4Q3LI77 160 aa5.1□□□□□ -1.59
CPEB4-203ENST00000517880 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.08□□□□□ -1.6
CPEB4-203ENST00000517880 A0A0D9SG42 100 aa5.04□□□□□ -1.6
CPEB4-203ENST00000517880 R4GN34 69 aa5.02□□□□□ -1.61
CPEB4-203ENST00000517880 CRIPTQ9P021 101 aa4.98□□□□□ -1.61
CPEB4-203ENST00000517880 KRTAP12-1P59990 96 aa4.97□□□□□ -1.61
CPEB4-203ENST00000517880 HMCN2Q8NDA2 5059 aa4.97□□□□□ -1.61
CPEB4-203ENST00000517880 HERC1Q15751 4861 aa4.96□□□□□ -1.62
CPEB4-203ENST00000517880 ROMO1P60602 79 aa4.94□□□□□ -1.62
CPEB4-203ENST00000517880 SPINT4Q6UDR6 99 aa4.94□□□□□ -1.62
CPEB4-203ENST00000517880 KRTAP12-2P59991 146 aa4.93□□□□□ -1.62
CPEB4-203ENST00000517880 FLGP20930 4061 aaPredicted RBP4.89□□□□□ -1.63
CPEB4-203ENST00000517880 MT1HP80294 61 aa4.89□□□□□ -1.63
CPEB4-203ENST00000517880 LINC01554Q52M75 96 aa4.89□□□□□ -1.63
CPEB4-203ENST00000517880 M0R2T5 61 aa4.88□□□□□ -1.63
CPEB4-203ENST00000517880 PRAC1Q96KF2 57 aa4.88□□□□□ -1.63
CPEB4-203ENST00000517880 KRTAP25-1Q3LHN0 102 aa4.8□□□□□ -1.64
CPEB4-203ENST00000517880 KRTAP5-11Q6L8G4 156 aa4.8□□□□□ -1.64
CPEB4-203ENST00000517880 MUC2Q02817 5179 aa4.78□□□□□ -1.64
CPEB4-203ENST00000517880 SPRR2GQ9BYE4 73 aa4.78□□□□□ -1.64
CPEB4-203ENST00000517880 MT2AP02795 61 aa4.73□□□□□ -1.65
CPEB4-203ENST00000517880 KRTAP10-10P60014 251 aa4.73□□□□□ -1.65
CPEB4-203ENST00000517880 KRTAP10-7P60409 375 aaPredicted RBP4.73□□□□□ -1.65
CPEB4-203ENST00000517880 CAMK2N1Q7Z7J9 78 aa4.73□□□□□ -1.65
CPEB4-203ENST00000517880 UBR4Q5T4S7 5183 aa4.72□□□□□ -1.65
CPEB4-203ENST00000517880 MT1FP04733 61 aa4.69□□□□□ -1.66
CPEB4-203ENST00000517880 PLAC4Q8WY50 150 aa4.69□□□□□ -1.66
CPEB4-203ENST00000517880 RNF213Q63HN8 5207 aa4.68□□□□□ -1.66
CPEB4-203ENST00000517880 C10orf95Q9H7T3 257 aa4.67□□□□□ -1.66
CPEB4-203ENST00000517880 KRTAP19-8Q3LI54 63 aa4.63□□□□□ -1.67
CPEB4-203ENST00000517880 FAT4Q6V0I7 4981 aa4.59□□□□□ -1.67
CPEB4-203ENST00000517880 PP632Q6XCG6 107 aa4.56□□□□□ -1.68
CPEB4-203ENST00000517880 TNP1P09430 55 aa4.55□□□□□ -1.68
CPEB4-203ENST00000517880 KRTAP23-1A1A580 65 aa4.54□□□□□ -1.68
CPEB4-203ENST00000517880 KRTAP15-1Q3LI76 137 aa4.54□□□□□ -1.68
CPEB4-203ENST00000517880 MT1BP07438 61 aa4.5□□□□□ -1.69
CPEB4-203ENST00000517880 PRO2289Q9P1D8 64 aa4.41□□□□□ -1.7
CPEB4-203ENST00000517880 KRTAP10-5P60370 271 aa4.39□□□□□ -1.71
CPEB4-203ENST00000517880 MT1XP80297 61 aa4.38□□□□□ -1.71
CPEB4-203ENST00000517880 KRTAP5-1Q6L8H4 278 aa4.38□□□□□ -1.71
CPEB4-203ENST00000517880 KRTAP5-9P26371 169 aa4.36□□□□□ -1.71
CPEB4-203ENST00000517880 KRTAP5-4Q6L8H1 288 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms