RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 PMAIP1Q13794 54 aa5.08□□□□□ -1.6
EFCAB13-203ENST00000517484 TPRXLQ17RH7 258 aa5.06□□□□□ -1.6
EFCAB13-203ENST00000517484 SEC61BP60468 96 aaKnown RBP5.05□□□□□ -1.6
EFCAB13-203ENST00000517484 DMAC1Q96GE9 116 aa5.04□□□□□ -1.6
EFCAB13-203ENST00000517484 RBM12B-AS1Q9P1G2 102 aa5.04□□□□□ -1.6
EFCAB13-203ENST00000517484 UBR4Q5T4S7 5183 aa5.03□□□□□ -1.6
EFCAB13-203ENST00000517484 A0A1B0GU69 56 aa5.03□□□□□ -1.6
EFCAB13-203ENST00000517484 SEC61GP60059 68 aa5.02□□□□□ -1.61
EFCAB13-203ENST00000517484 KRTAP3-1Q9BYR8 98 aa5.01□□□□□ -1.61
EFCAB13-203ENST00000517484 LCA10Q71F78 164 aa5□□□□□ -1.61
EFCAB13-203ENST00000517484 LINC01558Q9Y6Z2 57 aa4.97□□□□□ -1.61
EFCAB13-203ENST00000517484 S4R3F8 94 aa4.96□□□□□ -1.62
EFCAB13-203ENST00000517484 M0R2T5 61 aa4.96□□□□□ -1.62
EFCAB13-203ENST00000517484 KRTAP4-1Q9BYQ7 146 aa4.95□□□□□ -1.62
EFCAB13-203ENST00000517484 FAT4Q6V0I7 4981 aa4.95□□□□□ -1.62
EFCAB13-203ENST00000517484 LINC01554Q52M75 96 aa4.94□□□□□ -1.62
EFCAB13-203ENST00000517484 A0A0D9SG42 100 aa4.93□□□□□ -1.62
EFCAB13-203ENST00000517484 CDC42SE1Q9NRR8 79 aa4.93□□□□□ -1.62
EFCAB13-203ENST00000517484 H1FX-AS1Q4G0G2 97 aa4.9□□□□□ -1.63
EFCAB13-203ENST00000517484 SPATA8Q6RVD6 105 aa4.89□□□□□ -1.63
EFCAB13-203ENST00000517484 KTN1-AS1Q86SY8 53 aa4.89□□□□□ -1.63
EFCAB13-203ENST00000517484 CSAG1Q6PB30 78 aa4.87□□□□□ -1.63
EFCAB13-203ENST00000517484 HMCN2Q8NDA2 5059 aa4.87□□□□□ -1.63
EFCAB13-203ENST00000517484 A6NN06 94 aa4.85□□□□□ -1.63
EFCAB13-203ENST00000517484 ADM2Q7Z4H4 148 aa4.85□□□□□ -1.63
EFCAB13-203ENST00000517484 A0A1B0GU33 70 aa4.81□□□□□ -1.64
EFCAB13-203ENST00000517484 P0C880 135 aa4.81□□□□□ -1.64
EFCAB13-203ENST00000517484 UQCR11O14957 56 aa4.8□□□□□ -1.64
EFCAB13-203ENST00000517484 MIR22HGQ0VDD5 57 aa4.8□□□□□ -1.64
EFCAB13-203ENST00000517484 SPINT4Q6UDR6 99 aa4.77□□□□□ -1.65
EFCAB13-203ENST00000517484 KRTAP3-3Q9BYR6 98 aa4.77□□□□□ -1.65
EFCAB13-203ENST00000517484 PRAC1Q96KF2 57 aa4.76□□□□□ -1.65
EFCAB13-203ENST00000517484 M0QZ58 72 aa4.72□□□□□ -1.65
EFCAB13-203ENST00000517484 R4GN34 69 aa4.72□□□□□ -1.65
EFCAB13-203ENST00000517484 CRIPTQ9P021 101 aa4.67□□□□□ -1.66
EFCAB13-203ENST00000517484 H0YAA0 97 aa4.66□□□□□ -1.66
EFCAB13-203ENST00000517484 KRTAP13-4Q3LI77 160 aa4.65□□□□□ -1.67
EFCAB13-203ENST00000517484 FSIP2Q5CZC0 6907 aa4.64□□□□□ -1.67
EFCAB13-203ENST00000517484 LORP23490 312 aaPredicted RBP4.64□□□□□ -1.67
EFCAB13-203ENST00000517484 KRTAP10-6P60371 365 aaPredicted RBP4.64□□□□□ -1.67
EFCAB13-203ENST00000517484 K7ERS5 55 aa4.63□□□□□ -1.67
EFCAB13-203ENST00000517484 MUC17Q685J3 4493 aa4.63□□□□□ -1.67
EFCAB13-203ENST00000517484 KRTAP3-2Q9BYR7 98 aa4.61□□□□□ -1.67
EFCAB13-203ENST00000517484 KRTAP10-10P60014 251 aa4.6□□□□□ -1.67
EFCAB13-203ENST00000517484 CAMK2N1Q7Z7J9 78 aa4.54□□□□□ -1.68
EFCAB13-203ENST00000517484 MT1HP80294 61 aa4.52□□□□□ -1.69
EFCAB13-203ENST00000517484 KRTAP19-2Q3LHN2 52 aa4.51□□□□□ -1.69
EFCAB13-203ENST00000517484 LCE2CQ5TA81 110 aa4.51□□□□□ -1.69
EFCAB13-203ENST00000517484 KRTAP12-2P59991 146 aa4.49□□□□□ -1.69
EFCAB13-203ENST00000517484 FLGP20930 4061 aaPredicted RBP4.47□□□□□ -1.69
EFCAB13-203ENST00000517484 USH2AO75445 5202 aa4.44□□□□□ -1.7
EFCAB13-203ENST00000517484 KRTAP12-1P59990 96 aa4.4□□□□□ -1.7
EFCAB13-203ENST00000517484 KRTAP25-1Q3LHN0 102 aa4.4□□□□□ -1.7
EFCAB13-203ENST00000517484 MT1FP04733 61 aa4.38□□□□□ -1.71
EFCAB13-203ENST00000517484 C10orf95Q9H7T3 257 aa4.38□□□□□ -1.71
EFCAB13-203ENST00000517484 MT2AP02795 61 aa4.37□□□□□ -1.71
EFCAB13-203ENST00000517484 PLAC4Q8WY50 150 aa4.37□□□□□ -1.71
EFCAB13-203ENST00000517484 ROMO1P60602 79 aa4.33□□□□□ -1.72
EFCAB13-203ENST00000517484 LCE2DQ5TA82 110 aaPredicted RBP4.3□□□□□ -1.72
EFCAB13-203ENST00000517484 KRTAP9-8Q9BYQ0 159 aa4.3□□□□□ -1.72
EFCAB13-203ENST00000517484 H3BS24 57 aa4.28□□□□□ -1.72
EFCAB13-203ENST00000517484 KRTAP19-1Q8IUB9 90 aa4.24□□□□□ -1.73
EFCAB13-203ENST00000517484 LCE2AQ5TA79 106 aaPredicted RBP4.14□□□□□ -1.75
EFCAB13-203ENST00000517484 SPRR2GQ9BYE4 73 aa4.14□□□□□ -1.75
EFCAB13-203ENST00000517484 TNP1P09430 55 aa4.12□□□□□ -1.75
EFCAB13-203ENST00000517484 KMT2DO14686 5537 aa4.12□□□□□ -1.75
EFCAB13-203ENST00000517484 KRTAP9-3Q9BYQ3 159 aa4.12□□□□□ -1.75
EFCAB13-203ENST00000517484 LCE2BO14633 110 aa4.11□□□□□ -1.75
EFCAB13-203ENST00000517484 MT1BP07438 61 aa4.07□□□□□ -1.76
EFCAB13-203ENST00000517484 NDUFAF8A1L188 74 aa4.04□□□□□ -1.76
EFCAB13-203ENST00000517484 KRTAP15-1Q3LI76 137 aa3.99□□□□□ -1.77
EFCAB13-203ENST00000517484 PRO2289Q9P1D8 64 aa3.99□□□□□ -1.77
EFCAB13-203ENST00000517484 SSPOA2VEC9 5147 aa3.99□□□□□ -1.77
EFCAB13-203ENST00000517484 KRTAP19-8Q3LI54 63 aa3.97□□□□□ -1.77
EFCAB13-203ENST00000517484 MT1XP80297 61 aa3.96□□□□□ -1.78
EFCAB13-203ENST00000517484 KRTAP10-7P60409 375 aaPredicted RBP3.95□□□□□ -1.78
EFCAB13-203ENST00000517484 KRTAP10-5P60370 271 aa3.94□□□□□ -1.78
EFCAB13-203ENST00000517484 LCE3AQ5TA76 89 aa3.94□□□□□ -1.78
EFCAB13-203ENST00000517484 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
EFCAB13-203ENST00000517484 KRTAP4-8A0A0G2JLE6 195 aa3.91□□□□□ -1.78
EFCAB13-203ENST00000517484 KRTAP4-8Q9BYQ9 185 aa3.91□□□□□ -1.78
EFCAB13-203ENST00000517484 KRTAP10-12P60413 245 aa3.89□□□□□ -1.79
EFCAB13-203ENST00000517484 DSTQ03001 7570 aaKnown RBP3.84□□□□□ -1.79
EFCAB13-203ENST00000517484 FCGBPQ9Y6R7 5405 aaPredicted RBP3.83□□□□□ -1.8
EFCAB13-203ENST00000517484 KRTAP9-2Q9BYQ4 174 aa3.8□□□□□ -1.8
EFCAB13-203ENST00000517484 SYNE2Q8WXH0 6885 aaKnown RBP3.8□□□□□ -1.8
EFCAB13-203ENST00000517484 PP632Q6XCG6 107 aa3.8□□□□□ -1.8
EFCAB13-203ENST00000517484 MUC12Q9UKN1 5478 aa3.79□□□□□ -1.8
EFCAB13-203ENST00000517484 MACF1Q9UPN3 7388 aaKnown RBP3.78□□□□□ -1.8
EFCAB13-203ENST00000517484 LUZP6Q538Z0 58 aa3.76□□□□□ -1.81
EFCAB13-203ENST00000517484 KRTAP12-3P60328 96 aa3.75□□□□□ -1.81
EFCAB13-203ENST00000517484 KRTAP19-5Q3LI72 72 aa3.73□□□□□ -1.81
EFCAB13-203ENST00000517484 KRTAP8-1Q8IUC2 63 aa3.71□□□□□ -1.82
EFCAB13-203ENST00000517484 CRCT1Q9UGL9 99 aa3.67□□□□□ -1.82
EFCAB13-203ENST00000517484 KRTAP19-6Q3LI70 58 aa3.64□□□□□ -1.83
EFCAB13-203ENST00000517484 SPRR2FQ96RM1 72 aa3.63□□□□□ -1.83
EFCAB13-203ENST00000517484 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
EFCAB13-203ENST00000517484 KRTAP4-7Q9BYR0 210 aa3.62□□□□□ -1.83
EFCAB13-203ENST00000517484 MDN1Q9NU22 5596 aa3.58□□□□□ -1.84
EFCAB13-203ENST00000517484 SYNE1Q8NF91 8797 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms