RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 ATP5EP2Q5VTU8 51 aa4.14□□□□□ -1.75
NEDD4-210ENST00000513957 FLGP20930 4061 aaPredicted RBP4.14□□□□□ -1.75
NEDD4-210ENST00000513957 WFDC13Q8IUB5 93 aa4.13□□□□□ -1.75
NEDD4-210ENST00000513957 Q8N9L7 120 aa4.13□□□□□ -1.75
NEDD4-210ENST00000513957 KRTAP10-6P60371 365 aaPredicted RBP4.12□□□□□ -1.75
NEDD4-210ENST00000513957 TP53AIP1Q9HCN2 124 aa4.11□□□□□ -1.75
NEDD4-210ENST00000513957 C7orf65Q6ZTY9 151 aa4.1□□□□□ -1.75
NEDD4-210ENST00000513957 SMIM20Q8N5G0 67 aa4.08□□□□□ -1.76
NEDD4-210ENST00000513957 A0A1B0GV90 55 aa4.07□□□□□ -1.76
NEDD4-210ENST00000513957 SCGB1A1P11684 91 aa4.07□□□□□ -1.76
NEDD4-210ENST00000513957 J3QR89 54 aa4.06□□□□□ -1.76
NEDD4-210ENST00000513957 Q5W150 140 aa4.06□□□□□ -1.76
NEDD4-210ENST00000513957 LINC00643Q86TS7 51 aa4.05□□□□□ -1.76
NEDD4-210ENST00000513957 TRAV22A0A0B4J277 110 aa4.01□□□□□ -1.77
NEDD4-210ENST00000513957 HIST1H4AP62805 103 aaKnown RBP4.01□□□□□ -1.77
NEDD4-210ENST00000513957 H1FX-AS1Q4G0G2 97 aa4.01□□□□□ -1.77
NEDD4-210ENST00000513957 LUZP6Q538Z0 58 aa4.01□□□□□ -1.77
NEDD4-210ENST00000513957 LOC101927531A0A1B0GV80 90 aa3.98□□□□□ -1.77
NEDD4-210ENST00000513957 ATOX1O00244 68 aa3.98□□□□□ -1.77
NEDD4-210ENST00000513957 UQCRQO14949 82 aa3.98□□□□□ -1.77
NEDD4-210ENST00000513957 K7ERS5 55 aa3.97□□□□□ -1.77
NEDD4-210ENST00000513957 CYP4F30PQ9H0H9 118 aa3.95□□□□□ -1.78
NEDD4-210ENST00000513957 A0A087WVE0 104 aa3.94□□□□□ -1.78
NEDD4-210ENST00000513957 K7ERU9 68 aa3.94□□□□□ -1.78
NEDD4-210ENST00000513957 MT2AP02795 61 aa3.94□□□□□ -1.78
NEDD4-210ENST00000513957 IMUPQ9GZP8 106 aa3.93□□□□□ -1.78
NEDD4-210ENST00000513957 H0Y9P7 68 aa3.92□□□□□ -1.78
NEDD4-210ENST00000513957 C1orf64Q8NEQ6 169 aa3.92□□□□□ -1.78
NEDD4-210ENST00000513957 MT1FP04733 61 aa3.91□□□□□ -1.78
NEDD4-210ENST00000513957 CRCT1Q9UGL9 99 aa3.91□□□□□ -1.78
NEDD4-210ENST00000513957 A8MUN3 132 aa3.9□□□□□ -1.79
NEDD4-210ENST00000513957 H3BPC8 53 aa3.9□□□□□ -1.79
NEDD4-210ENST00000513957 KRTAP10-10P60014 251 aa3.9□□□□□ -1.79
NEDD4-210ENST00000513957 S4R3F8 94 aa3.9□□□□□ -1.79
NEDD4-210ENST00000513957 CSAG1Q6PB30 78 aa3.86□□□□□ -1.79
NEDD4-210ENST00000513957 SPANXA2-OT1Q8N9U9 137 aa3.86□□□□□ -1.79
NEDD4-210ENST00000513957 LINC00208Q96KT6 92 aa3.86□□□□□ -1.79
NEDD4-210ENST00000513957 LCA10Q71F78 164 aa3.85□□□□□ -1.79
NEDD4-210ENST00000513957 FSIP2Q5CZC0 6907 aa3.85□□□□□ -1.79
NEDD4-210ENST00000513957 RPS28P62857 69 aaKnown RBP3.84□□□□□ -1.79
NEDD4-210ENST00000513957 MT-ATP8P03928 68 aa3.82□□□□□ -1.8
NEDD4-210ENST00000513957 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
NEDD4-210ENST00000513957 FAM236AA0A1B0GUQ0 79 aa3.8□□□□□ -1.8
NEDD4-210ENST00000513957 FAM236BA0A1B0GV22 79 aa3.8□□□□□ -1.8
NEDD4-210ENST00000513957 A6NED7 52 aa3.8□□□□□ -1.8
NEDD4-210ENST00000513957 KLKP1Q107X0 134 aa3.8□□□□□ -1.8
NEDD4-210ENST00000513957 TRAV7A0A075B6U4 112 aa3.79□□□□□ -1.8
NEDD4-210ENST00000513957 NDUFC1O43677 76 aa3.79□□□□□ -1.8
NEDD4-210ENST00000513957 MT3P25713 68 aa3.79□□□□□ -1.8
NEDD4-210ENST00000513957 H0YAA0 97 aa3.78□□□□□ -1.8
NEDD4-210ENST00000513957 KTN1-AS1Q86SY8 53 aa3.78□□□□□ -1.8
NEDD4-210ENST00000513957 DMAC1Q96GE9 116 aa3.77□□□□□ -1.81
NEDD4-210ENST00000513957 ADM2Q7Z4H4 148 aa3.75□□□□□ -1.81
NEDD4-210ENST00000513957 CRIPTQ9P021 101 aa3.75□□□□□ -1.81
NEDD4-210ENST00000513957 USH2AO75445 5202 aa3.74□□□□□ -1.81
NEDD4-210ENST00000513957 SPRR2GQ9BYE4 73 aa3.72□□□□□ -1.81
NEDD4-210ENST00000513957 KRTAP19-6Q3LI70 58 aa3.71□□□□□ -1.82
NEDD4-210ENST00000513957 ACYP2P14621 99 aa3.7□□□□□ -1.82
NEDD4-210ENST00000513957 SERP2Q8N6R1 65 aa3.7□□□□□ -1.82
NEDD4-210ENST00000513957 SSPOA2VEC9 5147 aa3.7□□□□□ -1.82
NEDD4-210ENST00000513957 LINC01554Q52M75 96 aa3.68□□□□□ -1.82
NEDD4-210ENST00000513957 C20orf197Q8N268 126 aa3.68□□□□□ -1.82
NEDD4-210ENST00000513957 KRTAP19-8Q3LI54 63 aa3.67□□□□□ -1.82
NEDD4-210ENST00000513957 Q5VV11 94 aa3.67□□□□□ -1.82
NEDD4-210ENST00000513957 SPTSSBQ8NFR3 76 aa3.67□□□□□ -1.82
NEDD4-210ENST00000513957 LCE1AQ5T7P2 110 aa3.65□□□□□ -1.83
NEDD4-210ENST00000513957 SNURFQ9Y675 71 aa3.64□□□□□ -1.83
NEDD4-210ENST00000513957 MT1BP07438 61 aa3.62□□□□□ -1.83
NEDD4-210ENST00000513957 CHKB-CPT1BH3BT56 60 aa3.61□□□□□ -1.83
NEDD4-210ENST00000513957 COX7CP15954 63 aa3.61□□□□□ -1.83
NEDD4-210ENST00000513957 FCGBPQ9Y6R7 5405 aaPredicted RBP3.61□□□□□ -1.83
NEDD4-210ENST00000513957 A0A1B0GU33 70 aa3.6□□□□□ -1.83
NEDD4-210ENST00000513957 SPINT4Q6UDR6 99 aa3.6□□□□□ -1.83
NEDD4-210ENST00000513957 R4GN34 69 aa3.59□□□□□ -1.83
NEDD4-210ENST00000513957 A6NN06 94 aa3.57□□□□□ -1.84
NEDD4-210ENST00000513957 P0C880 135 aa3.56□□□□□ -1.84
NEDD4-210ENST00000513957 KRTAP10-5P60370 271 aa3.55□□□□□ -1.84
NEDD4-210ENST00000513957 KRTAP5-11Q6L8G4 156 aa3.55□□□□□ -1.84
NEDD4-210ENST00000513957 M0QZ58 72 aa3.54□□□□□ -1.84
NEDD4-210ENST00000513957 H7BZZ5 65 aa3.53□□□□□ -1.84
NEDD4-210ENST00000513957 PRO2289Q9P1D8 64 aa3.52□□□□□ -1.85
NEDD4-210ENST00000513957 KRTAP25-1Q3LHN0 102 aa3.51□□□□□ -1.85
NEDD4-210ENST00000513957 COA5Q86WW8 74 aa3.51□□□□□ -1.85
NEDD4-210ENST00000513957 BRK1Q8WUW1 75 aa3.51□□□□□ -1.85
NEDD4-210ENST00000513957 PLAC4Q8WY50 150 aa3.51□□□□□ -1.85
NEDD4-210ENST00000513957 MACF1Q9UPN3 7388 aaKnown RBP3.5□□□□□ -1.85
NEDD4-210ENST00000513957 ATP5EP56381 51 aaPredicted RBP3.46□□□□□ -1.86
NEDD4-210ENST00000513957 KRTAP10-7P60409 375 aaPredicted RBP3.46□□□□□ -1.86
NEDD4-210ENST00000513957 CYSTM1Q9H1C7 97 aa3.46□□□□□ -1.86
NEDD4-210ENST00000513957 KRTAP6-3Q3LI67 103 aa3.45□□□□□ -1.86
NEDD4-210ENST00000513957 SERP1Q9Y6X1 66 aa3.44□□□□□ -1.86
NEDD4-210ENST00000513957 MT1XP80297 61 aa3.43□□□□□ -1.86
NEDD4-210ENST00000513957 SYNE2Q8WXH0 6885 aaKnown RBP3.41□□□□□ -1.86
NEDD4-210ENST00000513957 A8MU10 97 aa3.41□□□□□ -1.86
NEDD4-210ENST00000513957 CCDC179H3BU77 68 aa3.41□□□□□ -1.86
NEDD4-210ENST00000513957 TMEM258P61165 79 aa3.4□□□□□ -1.87
NEDD4-210ENST00000513957 KRTAP12-2P59991 146 aa3.39□□□□□ -1.87
NEDD4-210ENST00000513957 KRTAP5-9P26371 169 aa3.36□□□□□ -1.87
NEDD4-210ENST00000513957 KRTAP13-4Q3LI77 160 aa3.36□□□□□ -1.87
NEDD4-210ENST00000513957 A0A1B0GU69 56 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms