RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 SMIM26A0A096LP01 95 aa4.95□□□□□ -1.62
TOPBP1-209ENST00000513818 MT-ATP8P03928 68 aa4.94□□□□□ -1.62
TOPBP1-209ENST00000513818 C7orf65Q6ZTY9 151 aa4.94□□□□□ -1.62
TOPBP1-209ENST00000513818 RBM12B-AS1Q9P1G2 102 aa4.93□□□□□ -1.62
TOPBP1-209ENST00000513818 TP53AIP1Q9HCN2 124 aa4.92□□□□□ -1.62
TOPBP1-209ENST00000513818 M0R2T5 61 aa4.89□□□□□ -1.63
TOPBP1-209ENST00000513818 TRAV22A0A0B4J277 110 aa4.88□□□□□ -1.63
TOPBP1-209ENST00000513818 H0Y9P7 68 aa4.87□□□□□ -1.63
TOPBP1-209ENST00000513818 UQCRQO14949 82 aa4.87□□□□□ -1.63
TOPBP1-209ENST00000513818 SCGB1A1P11684 91 aa4.86□□□□□ -1.63
TOPBP1-209ENST00000513818 SMIM20Q8N5G0 67 aa4.85□□□□□ -1.63
TOPBP1-209ENST00000513818 FAM236AA0A1B0GUQ0 79 aa4.84□□□□□ -1.63
TOPBP1-209ENST00000513818 FAM236BA0A1B0GV22 79 aa4.84□□□□□ -1.63
TOPBP1-209ENST00000513818 PMAIP1Q13794 54 aa4.84□□□□□ -1.63
TOPBP1-209ENST00000513818 KRTAP10-6P60371 365 aaPredicted RBP4.83□□□□□ -1.64
TOPBP1-209ENST00000513818 IMUPQ9GZP8 106 aa4.83□□□□□ -1.64
TOPBP1-209ENST00000513818 CYP4F30PQ9H0H9 118 aa4.83□□□□□ -1.64
TOPBP1-209ENST00000513818 LOC101927531A0A1B0GV80 90 aa4.81□□□□□ -1.64
TOPBP1-209ENST00000513818 KRTAP15-1Q3LI76 137 aa4.81□□□□□ -1.64
TOPBP1-209ENST00000513818 LINC00208Q96KT6 92 aa4.81□□□□□ -1.64
TOPBP1-209ENST00000513818 ANAPC13Q9BS18 74 aa4.81□□□□□ -1.64
TOPBP1-209ENST00000513818 MP68P56378 58 aa4.8□□□□□ -1.64
TOPBP1-209ENST00000513818 C1orf64Q8NEQ6 169 aa4.8□□□□□ -1.64
TOPBP1-209ENST00000513818 ATOX1O00244 68 aa4.79□□□□□ -1.64
TOPBP1-209ENST00000513818 H1FX-AS1Q4G0G2 97 aa4.79□□□□□ -1.64
TOPBP1-209ENST00000513818 CAMK2N1Q7Z7J9 78 aa4.78□□□□□ -1.64
TOPBP1-209ENST00000513818 KLKP1Q107X0 134 aa4.77□□□□□ -1.65
TOPBP1-209ENST00000513818 TRAV7A0A075B6U4 112 aa4.73□□□□□ -1.65
TOPBP1-209ENST00000513818 KRTAP9-8Q9BYQ0 159 aa4.72□□□□□ -1.65
TOPBP1-209ENST00000513818 H3BPC8 53 aa4.7□□□□□ -1.66
TOPBP1-209ENST00000513818 MT2AP02795 61 aa4.7□□□□□ -1.66
TOPBP1-209ENST00000513818 S4R3F8 94 aa4.7□□□□□ -1.66
TOPBP1-209ENST00000513818 LCA10Q71F78 164 aa4.69□□□□□ -1.66
TOPBP1-209ENST00000513818 MT1FP04733 61 aa4.68□□□□□ -1.66
TOPBP1-209ENST00000513818 SNURFQ9Y675 71 aa4.68□□□□□ -1.66
TOPBP1-209ENST00000513818 NDUFAF8A1L188 74 aa4.66□□□□□ -1.66
TOPBP1-209ENST00000513818 KRTAP5-3Q6L8H2 238 aa4.66□□□□□ -1.66
TOPBP1-209ENST00000513818 SERP2Q8N6R1 65 aa4.65□□□□□ -1.67
TOPBP1-209ENST00000513818 C20orf197Q8N268 126 aa4.64□□□□□ -1.67
TOPBP1-209ENST00000513818 KRTAP10-10P60014 251 aa4.63□□□□□ -1.67
TOPBP1-209ENST00000513818 A8MUN3 132 aa4.61□□□□□ -1.67
TOPBP1-209ENST00000513818 CSAG1Q6PB30 78 aa4.6□□□□□ -1.67
TOPBP1-209ENST00000513818 DMAC1Q96GE9 116 aa4.6□□□□□ -1.67
TOPBP1-209ENST00000513818 USH2AO75445 5202 aa4.59□□□□□ -1.68
TOPBP1-209ENST00000513818 COX7CP15954 63 aa4.58□□□□□ -1.68
TOPBP1-209ENST00000513818 RPS28P62857 69 aaKnown RBP4.57□□□□□ -1.68
TOPBP1-209ENST00000513818 CYSTM1Q9H1C7 97 aa4.56□□□□□ -1.68
TOPBP1-209ENST00000513818 NDUFC1O43677 76 aa4.55□□□□□ -1.68
TOPBP1-209ENST00000513818 FSIP2Q5CZC0 6907 aa4.55□□□□□ -1.68
TOPBP1-209ENST00000513818 LUZP6Q538Z0 58 aa4.53□□□□□ -1.68
TOPBP1-209ENST00000513818 SSPOA2VEC9 5147 aa4.51□□□□□ -1.69
TOPBP1-209ENST00000513818 CCDC179H3BU77 68 aa4.49□□□□□ -1.69
TOPBP1-209ENST00000513818 ACYP2P14621 99 aa4.49□□□□□ -1.69
TOPBP1-209ENST00000513818 SPANXA2-OT1Q8N9U9 137 aa4.49□□□□□ -1.69
TOPBP1-209ENST00000513818 K7ERS5 55 aa4.48□□□□□ -1.69
TOPBP1-209ENST00000513818 H7BZZ5 65 aa4.47□□□□□ -1.69
TOPBP1-209ENST00000513818 CHKB-CPT1BH3BT56 60 aa4.46□□□□□ -1.7
TOPBP1-209ENST00000513818 ADM2Q7Z4H4 148 aa4.46□□□□□ -1.7
TOPBP1-209ENST00000513818 CRCT1Q9UGL9 99 aa4.45□□□□□ -1.7
TOPBP1-209ENST00000513818 H0YAA0 97 aa4.42□□□□□ -1.7
TOPBP1-209ENST00000513818 KTN1-AS1Q86SY8 53 aa4.42□□□□□ -1.7
TOPBP1-209ENST00000513818 COA5Q86WW8 74 aa4.42□□□□□ -1.7
TOPBP1-209ENST00000513818 P0C880 135 aa4.41□□□□□ -1.7
TOPBP1-209ENST00000513818 SPTSSBQ8NFR3 76 aa4.38□□□□□ -1.71
TOPBP1-209ENST00000513818 SPRR2GQ9BYE4 73 aa4.38□□□□□ -1.71
TOPBP1-209ENST00000513818 A6NED7 52 aa4.36□□□□□ -1.71
TOPBP1-209ENST00000513818 MT1BP07438 61 aa4.34□□□□□ -1.71
TOPBP1-209ENST00000513818 CRIPTQ9P021 101 aa4.34□□□□□ -1.71
TOPBP1-209ENST00000513818 KRTAP19-8Q3LI54 63 aa4.33□□□□□ -1.72
TOPBP1-209ENST00000513818 FCGBPQ9Y6R7 5405 aaPredicted RBP4.33□□□□□ -1.72
TOPBP1-209ENST00000513818 Q5VV11 94 aa4.32□□□□□ -1.72
TOPBP1-209ENST00000513818 M0QZ58 72 aa4.31□□□□□ -1.72
TOPBP1-209ENST00000513818 R4GN34 69 aa4.3□□□□□ -1.72
TOPBP1-209ENST00000513818 LINC01554Q52M75 96 aa4.29□□□□□ -1.72
TOPBP1-209ENST00000513818 ATP5EP56381 51 aaPredicted RBP4.28□□□□□ -1.72
TOPBP1-209ENST00000513818 KRTAP19-6Q3LI70 58 aa4.28□□□□□ -1.72
TOPBP1-209ENST00000513818 TMEM258P61165 79 aa4.27□□□□□ -1.73
TOPBP1-209ENST00000513818 KRTAP13-4Q3LI77 160 aa4.23□□□□□ -1.73
TOPBP1-209ENST00000513818 BRK1Q8WUW1 75 aa4.2□□□□□ -1.74
TOPBP1-209ENST00000513818 SERP1Q9Y6X1 66 aa4.2□□□□□ -1.74
TOPBP1-209ENST00000513818 A6NN06 94 aa4.18□□□□□ -1.74
TOPBP1-209ENST00000513818 A0A1B0GU69 56 aa4.17□□□□□ -1.74
TOPBP1-209ENST00000513818 KRTAP10-5P60370 271 aa4.17□□□□□ -1.74
TOPBP1-209ENST00000513818 PLAC4Q8WY50 150 aa4.16□□□□□ -1.74
TOPBP1-209ENST00000513818 MACF1Q9UPN3 7388 aaKnown RBP4.15□□□□□ -1.74
TOPBP1-209ENST00000513818 SPATA8Q6RVD6 105 aa4.14□□□□□ -1.75
TOPBP1-209ENST00000513818 A0A1B0GU33 70 aa4.13□□□□□ -1.75
TOPBP1-209ENST00000513818 A0A0D9SG42 100 aa4.12□□□□□ -1.75
TOPBP1-209ENST00000513818 MT1XP80297 61 aa4.12□□□□□ -1.75
TOPBP1-209ENST00000513818 LINC01558Q9Y6Z2 57 aa4.09□□□□□ -1.75
TOPBP1-209ENST00000513818 PRR15LQ9BU68 103 aa4.07□□□□□ -1.76
TOPBP1-209ENST00000513818 A8MU10 97 aa4.06□□□□□ -1.76
TOPBP1-209ENST00000513818 SYNE2Q8WXH0 6885 aaKnown RBP4.05□□□□□ -1.76
TOPBP1-209ENST00000513818 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
TOPBP1-209ENST00000513818 PRO2289Q9P1D8 64 aa4.05□□□□□ -1.76
TOPBP1-209ENST00000513818 KMT2DO14686 5537 aa4.02□□□□□ -1.77
TOPBP1-209ENST00000513818 SPINT4Q6UDR6 99 aa4.02□□□□□ -1.77
TOPBP1-209ENST00000513818 KRTAP12-1P59990 96 aa4.01□□□□□ -1.77
TOPBP1-209ENST00000513818 KRTAP12-2P59991 146 aa4□□□□□ -1.77
TOPBP1-209ENST00000513818 KRTAP25-1Q3LHN0 102 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms