RNA–Protein interactions for RNA: ENST00000513514.2

DDR1-273, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 186 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-273ENST00000513514 FAT3Q8TDW7 4589 aa4.47□□□□□ -1.69
DDR1-273ENST00000513514 LRP2P98164 4655 aa4.47□□□□□ -1.69
DDR1-273ENST00000513514 A8MU10 97 aa4.46□□□□□ -1.7
DDR1-273ENST00000513514 RETNLBQ9BQ08 111 aa4.42□□□□□ -1.7
DDR1-273ENST00000513514 RBM12B-AS1Q9P1G2 102 aa4.41□□□□□ -1.7
DDR1-273ENST00000513514 KRTAP10-4P60372 401 aaPredicted RBP4.37□□□□□ -1.71
DDR1-273ENST00000513514 PKHD1L1Q86WI1 4243 aa4.36□□□□□ -1.71
DDR1-273ENST00000513514 COX6B2Q6YFQ2 88 aa4.35□□□□□ -1.71
DDR1-273ENST00000513514 A0A1B0GU33 70 aa4.33□□□□□ -1.72
DDR1-273ENST00000513514 K7ERS5 55 aa4.33□□□□□ -1.72
DDR1-273ENST00000513514 KRTAP9-2Q9BYQ4 174 aa4.33□□□□□ -1.72
DDR1-273ENST00000513514 TNXBP22105 4242 aa4.32□□□□□ -1.72
DDR1-273ENST00000513514 MT1HL1P0DM35 61 aa4.32□□□□□ -1.72
DDR1-273ENST00000513514 H1FX-AS1Q4G0G2 97 aa4.3□□□□□ -1.72
DDR1-273ENST00000513514 KRTAP10-8P60410 259 aa4.29□□□□□ -1.72
DDR1-273ENST00000513514 KRTAP9-6A0A140TA67 174 aa4.28□□□□□ -1.72
DDR1-273ENST00000513514 C9orf92A6NGG3 77 aa4.28□□□□□ -1.72
DDR1-273ENST00000513514 KRTAP3-1Q9BYR8 98 aa4.28□□□□□ -1.72
DDR1-273ENST00000513514 RPL37P61927 97 aaKnown RBP4.26□□□□□ -1.73
DDR1-273ENST00000513514 LINC01554Q52M75 96 aa4.26□□□□□ -1.73
DDR1-273ENST00000513514 FAT4Q6V0I7 4981 aa4.25□□□□□ -1.73
DDR1-273ENST00000513514 LPAP08519 4548 aa4.25□□□□□ -1.73
DDR1-273ENST00000513514 H0YAA0 97 aa4.24□□□□□ -1.73
DDR1-273ENST00000513514 MUC2Q02817 5179 aa4.22□□□□□ -1.73
DDR1-273ENST00000513514 PRAC1Q96KF2 57 aa4.18□□□□□ -1.74
DDR1-273ENST00000513514 S4R3F8 94 aa4.17□□□□□ -1.74
DDR1-273ENST00000513514 XP32Q5T750 250 aa4.16□□□□□ -1.74
DDR1-273ENST00000513514 CSAG1Q6PB30 78 aa4.16□□□□□ -1.74
DDR1-273ENST00000513514 KRTAP25-1Q3LHN0 102 aa4.15□□□□□ -1.75
DDR1-273ENST00000513514 ADM2Q7Z4H4 148 aa4.14□□□□□ -1.75
DDR1-273ENST00000513514 TPRXLQ17RH7 258 aa4.13□□□□□ -1.75
DDR1-273ENST00000513514 KRTAP3-3Q9BYR6 98 aa4.13□□□□□ -1.75
DDR1-273ENST00000513514 KRTAP10-6P60371 365 aaPredicted RBP4.12□□□□□ -1.75
DDR1-273ENST00000513514 ROMO1P60602 79 aa4.12□□□□□ -1.75
DDR1-273ENST00000513514 LCE2AQ5TA79 106 aaPredicted RBP4.11□□□□□ -1.75
DDR1-273ENST00000513514 M0QZ58 72 aa4.1□□□□□ -1.75
DDR1-273ENST00000513514 KRTAP3-2Q9BYR7 98 aa4.08□□□□□ -1.76
DDR1-273ENST00000513514 FSIP2Q5CZC0 6907 aa4.02□□□□□ -1.77
DDR1-273ENST00000513514 CRCT1Q9UGL9 99 aa4.01□□□□□ -1.77
DDR1-273ENST00000513514 SEC61BP60468 96 aaKnown RBP4□□□□□ -1.77
DDR1-273ENST00000513514 CRIPTQ9P021 101 aa3.99□□□□□ -1.77
DDR1-273ENST00000513514 KRTAP13-4Q3LI77 160 aa3.97□□□□□ -1.77
DDR1-273ENST00000513514 P0C880 135 aa3.96□□□□□ -1.78
DDR1-273ENST00000513514 LCE2DQ5TA82 110 aaPredicted RBP3.94□□□□□ -1.78
DDR1-273ENST00000513514 A0A0D9SG42 100 aa3.93□□□□□ -1.78
DDR1-273ENST00000513514 KRTAP12-1P59990 96 aa3.92□□□□□ -1.78
DDR1-273ENST00000513514 MUC17Q685J3 4493 aa3.91□□□□□ -1.78
DDR1-273ENST00000513514 KRTAP12-2P59991 146 aa3.89□□□□□ -1.79
DDR1-273ENST00000513514 R4GN34 69 aa3.87□□□□□ -1.79
DDR1-273ENST00000513514 SPINT4Q6UDR6 99 aa3.86□□□□□ -1.79
DDR1-273ENST00000513514 KRTAP9-7A8MTY7 169 aa3.82□□□□□ -1.8
DDR1-273ENST00000513514 PP632Q6XCG6 107 aa3.82□□□□□ -1.8
DDR1-273ENST00000513514 KRTAP4-1Q9BYQ7 146 aa3.81□□□□□ -1.8
DDR1-273ENST00000513514 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.78□□□□□ -1.8
DDR1-273ENST00000513514 KRTAP23-1A1A580 65 aa3.76□□□□□ -1.81
DDR1-273ENST00000513514 H3BS24 57 aa3.75□□□□□ -1.81
DDR1-273ENST00000513514 KRTAP15-1Q3LI76 137 aa3.75□□□□□ -1.81
DDR1-273ENST00000513514 LCE2CQ5TA81 110 aa3.74□□□□□ -1.81
DDR1-273ENST00000513514 C10orf95Q9H7T3 257 aa3.72□□□□□ -1.81
DDR1-273ENST00000513514 MT1HP80294 61 aa3.71□□□□□ -1.82
DDR1-273ENST00000513514 KRTAP19-2Q3LHN2 52 aa3.7□□□□□ -1.82
DDR1-273ENST00000513514 LORP23490 312 aaPredicted RBP3.69□□□□□ -1.82
DDR1-273ENST00000513514 SSPOA2VEC9 5147 aa3.66□□□□□ -1.82
DDR1-273ENST00000513514 CAMK2N1Q7Z7J9 78 aa3.66□□□□□ -1.82
DDR1-273ENST00000513514 USH2AO75445 5202 aa3.64□□□□□ -1.83
DDR1-273ENST00000513514 PLAC4Q8WY50 150 aa3.63□□□□□ -1.83
DDR1-273ENST00000513514 TNP1P09430 55 aa3.61□□□□□ -1.83
DDR1-273ENST00000513514 FLGP20930 4061 aaPredicted RBP3.6□□□□□ -1.83
DDR1-273ENST00000513514 FCGBPQ9Y6R7 5405 aaPredicted RBP3.59□□□□□ -1.83
DDR1-273ENST00000513514 NDUFAF8A1L188 74 aa3.58□□□□□ -1.84
DDR1-273ENST00000513514 M0R2T5 61 aa3.57□□□□□ -1.84
DDR1-273ENST00000513514 LUZP6Q538Z0 58 aa3.56□□□□□ -1.84
DDR1-273ENST00000513514 SPRR2GQ9BYE4 73 aa3.55□□□□□ -1.84
DDR1-273ENST00000513514 KRTAP19-1Q8IUB9 90 aa3.51□□□□□ -1.85
DDR1-273ENST00000513514 SYNE2Q8WXH0 6885 aaKnown RBP3.5□□□□□ -1.85
DDR1-273ENST00000513514 MACF1Q9UPN3 7388 aaKnown RBP3.49□□□□□ -1.85
DDR1-273ENST00000513514 KRTAP9-8Q9BYQ0 159 aa3.45□□□□□ -1.86
DDR1-273ENST00000513514 SPRR5A0A1B0GTR4 108 aa3.44□□□□□ -1.86
DDR1-273ENST00000513514 LCE2BO14633 110 aa3.44□□□□□ -1.86
DDR1-273ENST00000513514 A0A0A0MQY5 61 aa3.4□□□□□ -1.87
DDR1-273ENST00000513514 KRTAP19-8Q3LI54 63 aa3.39□□□□□ -1.87
DDR1-273ENST00000513514 MT2AP02795 61 aa3.38□□□□□ -1.87
DDR1-273ENST00000513514 MT1FP04733 61 aa3.37□□□□□ -1.87
DDR1-273ENST00000513514 KRTAP6-3Q3LI67 103 aa3.36□□□□□ -1.87
DDR1-273ENST00000513514 KRTAP10-10P60014 251 aa3.34□□□□□ -1.87
DDR1-273ENST00000513514 KRTAP9-3Q9BYQ3 159 aa3.34□□□□□ -1.87
DDR1-273ENST00000513514 KRTAP8-1Q8IUC2 63 aa3.33□□□□□ -1.88
DDR1-273ENST00000513514 KRTAP19-6Q3LI70 58 aa3.32□□□□□ -1.88
DDR1-273ENST00000513514 NEBP20929 6669 aa3.3□□□□□ -1.88
DDR1-273ENST00000513514 KRTAP20-1Q3LI63 56 aa3.3□□□□□ -1.88
DDR1-273ENST00000513514 PRO2289Q9P1D8 64 aa3.29□□□□□ -1.88
DDR1-273ENST00000513514 MUC12Q9UKN1 5478 aa3.28□□□□□ -1.88
DDR1-273ENST00000513514 KRTAP19-4Q3LI73 84 aa3.24□□□□□ -1.89
DDR1-273ENST00000513514 LCE3AQ5TA76 89 aa3.24□□□□□ -1.89
DDR1-273ENST00000513514 MT1BP07438 61 aa3.21□□□□□ -1.9
DDR1-273ENST00000513514 KRTAP10-5P60370 271 aa3.21□□□□□ -1.9
DDR1-273ENST00000513514 KRTAP10-12P60413 245 aa3.2□□□□□ -1.9
DDR1-273ENST00000513514 MT1XP80297 61 aa3.2□□□□□ -1.9
DDR1-273ENST00000513514 KRTAP12-3P60328 96 aa3.18□□□□□ -1.9
DDR1-273ENST00000513514 MDN1Q9NU22 5596 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 1014.8 ms