RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 ATP11AUNQ6ZP68 121 aa4.4□□□□□ -1.71
HTT-209ENST00000512068 Q75L30 129 aa4.4□□□□□ -1.71
HTT-209ENST00000512068 PCLOQ9Y6V0 5065 aa4.39□□□□□ -1.71
HTT-209ENST00000512068 KRTAP13-3Q3SY46 172 aa4.39□□□□□ -1.71
HTT-209ENST00000512068 TPRXLQ17RH7 258 aa4.38□□□□□ -1.71
HTT-209ENST00000512068 C7orf65Q6ZTY9 151 aa4.38□□□□□ -1.71
HTT-209ENST00000512068 RPL37P61927 97 aaKnown RBP4.36□□□□□ -1.71
HTT-209ENST00000512068 CYP4F30PQ9H0H9 118 aa4.36□□□□□ -1.71
HTT-209ENST00000512068 SPANXA2-OT1Q8N9U9 137 aa4.35□□□□□ -1.71
HTT-209ENST00000512068 MYCBP2O75592 4640 aa4.35□□□□□ -1.71
HTT-209ENST00000512068 HERC2O95714 4834 aa4.34□□□□□ -1.71
HTT-209ENST00000512068 SERP1Q9Y6X1 66 aa4.31□□□□□ -1.72
HTT-209ENST00000512068 HRES1P13985 223 aa4.3□□□□□ -1.72
HTT-209ENST00000512068 SPINK7P58062 85 aa4.3□□□□□ -1.72
HTT-209ENST00000512068 ABCA13Q86UQ4 5058 aa4.29□□□□□ -1.72
HTT-209ENST00000512068 ACYP2P14621 99 aa4.27□□□□□ -1.73
HTT-209ENST00000512068 RPS28P62857 69 aaKnown RBP4.26□□□□□ -1.73
HTT-209ENST00000512068 KRTAP9-8Q9BYQ0 159 aa4.26□□□□□ -1.73
HTT-209ENST00000512068 CHKB-CPT1BH3BT56 60 aa4.25□□□□□ -1.73
HTT-209ENST00000512068 KRTAP5-3Q6L8H2 238 aa4.25□□□□□ -1.73
HTT-209ENST00000512068 A8MUN3 132 aa4.24□□□□□ -1.73
HTT-209ENST00000512068 DMAC1Q96GE9 116 aa4.24□□□□□ -1.73
HTT-209ENST00000512068 C4orf26Q17RF5 130 aa4.23□□□□□ -1.73
HTT-209ENST00000512068 COA5Q86WW8 74 aa4.23□□□□□ -1.73
HTT-209ENST00000512068 RBM12B-AS1Q9P1G2 102 aa4.21□□□□□ -1.74
HTT-209ENST00000512068 SMIM26A0A096LP01 95 aa4.2□□□□□ -1.74
HTT-209ENST00000512068 COX6B2Q6YFQ2 88 aa4.19□□□□□ -1.74
HTT-209ENST00000512068 SPTSSBQ8NFR3 76 aa4.18□□□□□ -1.74
HTT-209ENST00000512068 V9GYY9 64 aa4.16□□□□□ -1.74
HTT-209ENST00000512068 S4R3F8 94 aa4.11□□□□□ -1.75
HTT-209ENST00000512068 LPAP08519 4548 aa4.1□□□□□ -1.75
HTT-209ENST00000512068 MT3P25713 68 aa4.1□□□□□ -1.75
HTT-209ENST00000512068 H1FX-AS1Q4G0G2 97 aa4.1□□□□□ -1.75
HTT-209ENST00000512068 LRP2P98164 4655 aa4.08□□□□□ -1.76
HTT-209ENST00000512068 SEC61GP60059 68 aa4.08□□□□□ -1.76
HTT-209ENST00000512068 Q1T7F1 81 aa4.08□□□□□ -1.76
HTT-209ENST00000512068 PRR15LQ9BU68 103 aa4.08□□□□□ -1.76
HTT-209ENST00000512068 KRTAP2-2Q9BYT5 123 aa4.07□□□□□ -1.76
HTT-209ENST00000512068 UBR4Q5T4S7 5183 aa4.06□□□□□ -1.76
HTT-209ENST00000512068 A0A1B0GU69 56 aa4.05□□□□□ -1.76
HTT-209ENST00000512068 LINC01558Q9Y6Z2 57 aa4.05□□□□□ -1.76
HTT-209ENST00000512068 HERC1Q15751 4861 aa4.05□□□□□ -1.76
HTT-209ENST00000512068 PSPHP1O15172 72 aa4.03□□□□□ -1.76
HTT-209ENST00000512068 LCA10Q71F78 164 aa4.03□□□□□ -1.76
HTT-209ENST00000512068 KRTAP4-1Q9BYQ7 146 aa4.03□□□□□ -1.76
HTT-209ENST00000512068 MUC17Q685J3 4493 aa4.01□□□□□ -1.77
HTT-209ENST00000512068 CSAG1Q6PB30 78 aa4□□□□□ -1.77
HTT-209ENST00000512068 PRAC1Q96KF2 57 aa3.99□□□□□ -1.77
HTT-209ENST00000512068 HMCN2Q8NDA2 5059 aa3.99□□□□□ -1.77
HTT-209ENST00000512068 A6NED7 52 aa3.96□□□□□ -1.78
HTT-209ENST00000512068 Q5VV11 94 aa3.96□□□□□ -1.78
HTT-209ENST00000512068 UQCR11O14957 56 aa3.92□□□□□ -1.78
HTT-209ENST00000512068 BRK1Q8WUW1 75 aa3.91□□□□□ -1.78
HTT-209ENST00000512068 ADM2Q7Z4H4 148 aa3.9□□□□□ -1.79
HTT-209ENST00000512068 A0A1B0GU33 70 aa3.89□□□□□ -1.79
HTT-209ENST00000512068 M0R2T5 61 aa3.89□□□□□ -1.79
HTT-209ENST00000512068 H0YAA0 97 aa3.88□□□□□ -1.79
HTT-209ENST00000512068 KRTAP19-2Q3LHN2 52 aa3.88□□□□□ -1.79
HTT-209ENST00000512068 MIR22HGQ0VDD5 57 aa3.87□□□□□ -1.79
HTT-209ENST00000512068 CDC42SE1Q9NRR8 79 aa3.85□□□□□ -1.79
HTT-209ENST00000512068 NDUFAF8A1L188 74 aa3.83□□□□□ -1.8
HTT-209ENST00000512068 KRTAP10-6P60371 365 aaPredicted RBP3.82□□□□□ -1.8
HTT-209ENST00000512068 P0C880 135 aa3.81□□□□□ -1.8
HTT-209ENST00000512068 MT1HP80294 61 aa3.8□□□□□ -1.8
HTT-209ENST00000512068 SPATA8Q6RVD6 105 aa3.8□□□□□ -1.8
HTT-209ENST00000512068 PRO0628Q9UI54 55 aa3.8□□□□□ -1.8
HTT-209ENST00000512068 R4GN34 69 aa3.8□□□□□ -1.8
HTT-209ENST00000512068 K7ERS5 55 aa3.79□□□□□ -1.8
HTT-209ENST00000512068 M0QZ58 72 aa3.79□□□□□ -1.8
HTT-209ENST00000512068 FLGP20930 4061 aaPredicted RBP3.79□□□□□ -1.8
HTT-209ENST00000512068 RNF213Q63HN8 5207 aa3.78□□□□□ -1.8
HTT-209ENST00000512068 MUC2Q02817 5179 aa3.76□□□□□ -1.81
HTT-209ENST00000512068 A0A0D9SG42 100 aa3.75□□□□□ -1.81
HTT-209ENST00000512068 CRIPTQ9P021 101 aa3.75□□□□□ -1.81
HTT-209ENST00000512068 A8MU10 97 aa3.72□□□□□ -1.81
HTT-209ENST00000512068 LINC01554Q52M75 96 aa3.72□□□□□ -1.81
HTT-209ENST00000512068 KRTAP13-4Q3LI77 160 aa3.71□□□□□ -1.82
HTT-209ENST00000512068 LCE1FQ5T754 118 aa3.7□□□□□ -1.82
HTT-209ENST00000512068 KRTAP10-10P60014 251 aa3.69□□□□□ -1.82
HTT-209ENST00000512068 PMAIP1Q13794 54 aa3.69□□□□□ -1.82
HTT-209ENST00000512068 FAT4Q6V0I7 4981 aa3.69□□□□□ -1.82
HTT-209ENST00000512068 SPINT4Q6UDR6 99 aa3.68□□□□□ -1.82
HTT-209ENST00000512068 MT2AP02795 61 aa3.65□□□□□ -1.83
HTT-209ENST00000512068 MT1FP04733 61 aa3.62□□□□□ -1.83
HTT-209ENST00000512068 KRTAP10-7P60409 375 aaPredicted RBP3.62□□□□□ -1.83
HTT-209ENST00000512068 A6NN06 94 aa3.61□□□□□ -1.83
HTT-209ENST00000512068 KRTAP12-1P59990 96 aa3.61□□□□□ -1.83
HTT-209ENST00000512068 KRTAP12-2P59991 146 aa3.6□□□□□ -1.83
HTT-209ENST00000512068 KRTAP10-12P60413 245 aa3.59□□□□□ -1.83
HTT-209ENST00000512068 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
HTT-209ENST00000512068 PLAC4Q8WY50 150 aa3.59□□□□□ -1.83
HTT-209ENST00000512068 CAMK2N1Q7Z7J9 78 aa3.58□□□□□ -1.84
HTT-209ENST00000512068 SPRR2GQ9BYE4 73 aa3.58□□□□□ -1.84
HTT-209ENST00000512068 ROMO1P60602 79 aa3.54□□□□□ -1.84
HTT-209ENST00000512068 KTN1-AS1Q86SY8 53 aa3.53□□□□□ -1.84
HTT-209ENST00000512068 KRTAP10-5P60370 271 aa3.49□□□□□ -1.85
HTT-209ENST00000512068 KRTAP19-8Q3LI54 63 aa3.48□□□□□ -1.85
HTT-209ENST00000512068 KRTAP5-11Q6L8G4 156 aa3.45□□□□□ -1.86
HTT-209ENST00000512068 LCE3CQ5T5A8 94 aa3.44□□□□□ -1.86
HTT-209ENST00000512068 PRO2289Q9P1D8 64 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms