RNA–Protein interactions for RNA: ENST00000511615.5

SUB1-209, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-209ENST00000511615 CDC42SE1Q9NRR8 79 aa5.22□□□□□ -1.57
SUB1-209ENST00000511615 LRP1Q07954 4544 aaKnown RBP5.22□□□□□ -1.57
SUB1-209ENST00000511615 ATP11AUNQ6ZP68 121 aa5.21□□□□□ -1.58
SUB1-209ENST00000511615 A8MUU9 505 aa5.19□□□□□ -1.58
SUB1-209ENST00000511615 FAT3Q8TDW7 4589 aa5.19□□□□□ -1.58
SUB1-209ENST00000511615 TNXBP22105 4242 aa5.19□□□□□ -1.58
SUB1-209ENST00000511615 FLG2Q5D862 2391 aaPredicted RBP5.19□□□□□ -1.58
SUB1-209ENST00000511615 A0A1B0GU69 56 aa5.18□□□□□ -1.58
SUB1-209ENST00000511615 LCA10Q71F78 164 aa5.18□□□□□ -1.58
SUB1-209ENST00000511615 C20orf166-AS1Q96NR2 134 aa5.18□□□□□ -1.58
SUB1-209ENST00000511615 KRTAP4-5Q9BYR2 181 aa5.18□□□□□ -1.58
SUB1-209ENST00000511615 MYCBP2O75592 4640 aa5.18□□□□□ -1.58
SUB1-209ENST00000511615 PMAIP1Q13794 54 aa5.17□□□□□ -1.58
SUB1-209ENST00000511615 SPTSSBQ8NFR3 76 aa5.16□□□□□ -1.58
SUB1-209ENST00000511615 C9orf92A6NGG3 77 aa5.15□□□□□ -1.58
SUB1-209ENST00000511615 SPINK7P58062 85 aa5.15□□□□□ -1.58
SUB1-209ENST00000511615 MT1HL1P0DM35 61 aa5.15□□□□□ -1.59
SUB1-209ENST00000511615 DMBT1Q9UGM3 2413 aaPredicted RBP5.13□□□□□ -1.59
SUB1-209ENST00000511615 A8MU10 97 aa5.12□□□□□ -1.59
SUB1-209ENST00000511615 SEC61GP60059 68 aa5.1□□□□□ -1.59
SUB1-209ENST00000511615 LCE1DQ5T752 114 aa5.1□□□□□ -1.59
SUB1-209ENST00000511615 UQCR11O14957 56 aa5.08□□□□□ -1.6
SUB1-209ENST00000511615 ABCA13Q86UQ4 5058 aa5.08□□□□□ -1.6
SUB1-209ENST00000511615 SPATA8Q6RVD6 105 aa5.07□□□□□ -1.6
SUB1-209ENST00000511615 A6NN06 94 aa5.06□□□□□ -1.6
SUB1-209ENST00000511615 MIR22HGQ0VDD5 57 aa5.05□□□□□ -1.6
SUB1-209ENST00000511615 KTN1-AS1Q86SY8 53 aa5.05□□□□□ -1.6
SUB1-209ENST00000511615 COX6B2Q6YFQ2 88 aa5.02□□□□□ -1.61
SUB1-209ENST00000511615 KRTAP4-9Q9BYQ8 210 aa5.01□□□□□ -1.61
SUB1-209ENST00000511615 KRTAP4-2Q9BYR5 136 aa5.01□□□□□ -1.61
SUB1-209ENST00000511615 RPL37P61927 97 aaKnown RBP4.99□□□□□ -1.61
SUB1-209ENST00000511615 KRTAP3-1Q9BYR8 98 aa4.99□□□□□ -1.61
SUB1-209ENST00000511615 HERC1Q15751 4861 aa4.95□□□□□ -1.62
SUB1-209ENST00000511615 LCE4AQ5TA78 99 aa4.94□□□□□ -1.62
SUB1-209ENST00000511615 A0A1B0GU33 70 aa4.92□□□□□ -1.62
SUB1-209ENST00000511615 TPRXLQ17RH7 258 aa4.9□□□□□ -1.62
SUB1-209ENST00000511615 H1FX-AS1Q4G0G2 97 aa4.9□□□□□ -1.62
SUB1-209ENST00000511615 UBR4Q5T4S7 5183 aa4.88□□□□□ -1.63
SUB1-209ENST00000511615 KRTAP5-3Q6L8H2 238 aa4.85□□□□□ -1.63
SUB1-209ENST00000511615 RBM12B-AS1Q9P1G2 102 aa4.85□□□□□ -1.63
SUB1-209ENST00000511615 S4R3F8 94 aa4.84□□□□□ -1.63
SUB1-209ENST00000511615 H0YAA0 97 aa4.83□□□□□ -1.64
SUB1-209ENST00000511615 KRTAP9-8Q9BYQ0 159 aa4.83□□□□□ -1.64
SUB1-209ENST00000511615 K7ERS5 55 aa4.83□□□□□ -1.64
SUB1-209ENST00000511615 KRTAP9-7A8MTY7 169 aa4.82□□□□□ -1.64
SUB1-209ENST00000511615 LRP2P98164 4655 aa4.82□□□□□ -1.64
SUB1-209ENST00000511615 LPAP08519 4548 aa4.8□□□□□ -1.64
SUB1-209ENST00000511615 HMCN2Q8NDA2 5059 aa4.79□□□□□ -1.64
SUB1-209ENST00000511615 H3BS24 57 aa4.77□□□□□ -1.65
SUB1-209ENST00000511615 PRAC1Q96KF2 57 aa4.77□□□□□ -1.65
SUB1-209ENST00000511615 ADM2Q7Z4H4 148 aa4.74□□□□□ -1.65
SUB1-209ENST00000511615 KRTAP4-11Q9BYQ6 195 aa4.74□□□□□ -1.65
SUB1-209ENST00000511615 KRTAP10-6P60371 365 aaPredicted RBP4.73□□□□□ -1.65
SUB1-209ENST00000511615 SEC61BP60468 96 aaKnown RBP4.71□□□□□ -1.66
SUB1-209ENST00000511615 CSAG1Q6PB30 78 aa4.71□□□□□ -1.66
SUB1-209ENST00000511615 KRTAP19-4Q3LI73 84 aa4.7□□□□□ -1.66
SUB1-209ENST00000511615 MUC17Q685J3 4493 aa4.68□□□□□ -1.66
SUB1-209ENST00000511615 LINC01554Q52M75 96 aa4.66□□□□□ -1.66
SUB1-209ENST00000511615 A0A0D9SG42 100 aa4.64□□□□□ -1.67
SUB1-209ENST00000511615 P0C880 135 aa4.64□□□□□ -1.67
SUB1-209ENST00000511615 ROMO1P60602 79 aa4.63□□□□□ -1.67
SUB1-209ENST00000511615 KRTAP13-4Q3LI77 160 aa4.63□□□□□ -1.67
SUB1-209ENST00000511615 LCE5AQ5TCM9 118 aa4.63□□□□□ -1.67
SUB1-209ENST00000511615 M0QZ58 72 aa4.62□□□□□ -1.67
SUB1-209ENST00000511615 KRTAP25-1Q3LHN0 102 aa4.61□□□□□ -1.67
SUB1-209ENST00000511615 KRTAP9-3Q9BYQ3 159 aa4.61□□□□□ -1.67
SUB1-209ENST00000511615 KRTAP4-1Q9BYQ7 146 aa4.61□□□□□ -1.67
SUB1-209ENST00000511615 MUC2Q02817 5179 aa4.57□□□□□ -1.68
SUB1-209ENST00000511615 KRTAP19-2Q3LHN2 52 aa4.54□□□□□ -1.68
SUB1-209ENST00000511615 SPINT4Q6UDR6 99 aa4.52□□□□□ -1.69
SUB1-209ENST00000511615 KRTAP12-1P59990 96 aa4.5□□□□□ -1.69
SUB1-209ENST00000511615 KRTAP12-2P59991 146 aa4.5□□□□□ -1.69
SUB1-209ENST00000511615 RNF213Q63HN8 5207 aa4.49□□□□□ -1.69
SUB1-209ENST00000511615 R4GN34 69 aa4.48□□□□□ -1.69
SUB1-209ENST00000511615 CRIPTQ9P021 101 aa4.46□□□□□ -1.7
SUB1-209ENST00000511615 FLGP20930 4061 aaPredicted RBP4.44□□□□□ -1.7
SUB1-209ENST00000511615 FAT4Q6V0I7 4981 aa4.38□□□□□ -1.71
SUB1-209ENST00000511615 C10orf95Q9H7T3 257 aa4.34□□□□□ -1.71
SUB1-209ENST00000511615 MT1HP80294 61 aa4.32□□□□□ -1.72
SUB1-209ENST00000511615 CAMK2N1Q7Z7J9 78 aa4.26□□□□□ -1.73
SUB1-209ENST00000511615 M0R2T5 61 aa4.2□□□□□ -1.74
SUB1-209ENST00000511615 PP632Q6XCG6 107 aa4.19□□□□□ -1.74
SUB1-209ENST00000511615 KRTAP15-1Q3LI76 137 aa4.15□□□□□ -1.75
SUB1-209ENST00000511615 CRCT1Q9UGL9 99 aa4.14□□□□□ -1.75
SUB1-209ENST00000511615 MT2AP02795 61 aa4.13□□□□□ -1.75
SUB1-209ENST00000511615 PLAC4Q8WY50 150 aa4.12□□□□□ -1.75
SUB1-209ENST00000511615 TNP1P09430 55 aa4.11□□□□□ -1.75
SUB1-209ENST00000511615 MT1FP04733 61 aa4.1□□□□□ -1.75
SUB1-209ENST00000511615 SPRR2GQ9BYE4 73 aa4.1□□□□□ -1.75
SUB1-209ENST00000511615 KRTAP23-1A1A580 65 aa4.09□□□□□ -1.76
SUB1-209ENST00000511615 KRTAP10-10P60014 251 aa4.06□□□□□ -1.76
SUB1-209ENST00000511615 FSIP2Q5CZC0 6907 aa4.06□□□□□ -1.76
SUB1-209ENST00000511615 NDUFAF8A1L188 74 aa3.99□□□□□ -1.77
SUB1-209ENST00000511615 KRTAP19-8Q3LI54 63 aa3.97□□□□□ -1.77
SUB1-209ENST00000511615 LUZP6Q538Z0 58 aa3.9□□□□□ -1.78
SUB1-209ENST00000511615 MT1BP07438 61 aa3.89□□□□□ -1.79
SUB1-209ENST00000511615 LCE3AQ5TA76 89 aa3.81□□□□□ -1.8
SUB1-209ENST00000511615 USH2AO75445 5202 aa3.81□□□□□ -1.8
SUB1-209ENST00000511615 PRO2289Q9P1D8 64 aa3.8□□□□□ -1.8
SUB1-209ENST00000511615 KRTAP10-5P60370 271 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms