RNA–Protein interactions for RNA: ENST00000510940.1

LETM1-204, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-204ENST00000510940 LCE2CQ5TA81 110 aa6.65□□□□□ -1.34
LETM1-204ENST00000510940 SPTSSBQ8NFR3 76 aa6.64□□□□□ -1.35
LETM1-204ENST00000510940 LCE2AQ5TA79 106 aaPredicted RBP6.63□□□□□ -1.35
LETM1-204ENST00000510940 M0R2T5 61 aa6.6□□□□□ -1.35
LETM1-204ENST00000510940 CSAG1Q6PB30 78 aa6.6□□□□□ -1.35
LETM1-204ENST00000510940 FLGP20930 4061 aaPredicted RBP6.6□□□□□ -1.35
LETM1-204ENST00000510940 LCA10Q71F78 164 aa6.59□□□□□ -1.35
LETM1-204ENST00000510940 MT1HP80294 61 aa6.58□□□□□ -1.36
LETM1-204ENST00000510940 COA5Q86WW8 74 aa6.58□□□□□ -1.36
LETM1-204ENST00000510940 FAT4Q6V0I7 4981 aa6.57□□□□□ -1.36
LETM1-204ENST00000510940 SERP1Q9Y6X1 66 aa6.52□□□□□ -1.37
LETM1-204ENST00000510940 KRTAP3-3Q9BYR6 98 aa6.5□□□□□ -1.37
LETM1-204ENST00000510940 H0YAA0 97 aa6.41□□□□□ -1.38
LETM1-204ENST00000510940 RPS28P62857 69 aaKnown RBP6.41□□□□□ -1.38
LETM1-204ENST00000510940 SEC61GP60059 68 aa6.39□□□□□ -1.39
LETM1-204ENST00000510940 KRTAP10-6P60371 365 aaPredicted RBP6.39□□□□□ -1.39
LETM1-204ENST00000510940 LORP23490 312 aaPredicted RBP6.36□□□□□ -1.39
LETM1-204ENST00000510940 V9GYY9 64 aa6.34□□□□□ -1.39
LETM1-204ENST00000510940 SMIM26A0A096LP01 95 aa6.33□□□□□ -1.4
LETM1-204ENST00000510940 ADM2Q7Z4H4 148 aa6.32□□□□□ -1.4
LETM1-204ENST00000510940 LCE2DQ5TA82 110 aaPredicted RBP6.31□□□□□ -1.4
LETM1-204ENST00000510940 PRR15LQ9BU68 103 aa6.31□□□□□ -1.4
LETM1-204ENST00000510940 A0A1B0GU69 56 aa6.29□□□□□ -1.4
LETM1-204ENST00000510940 KRTAP9-8Q9BYQ0 159 aa6.29□□□□□ -1.4
LETM1-204ENST00000510940 LINC01558Q9Y6Z2 57 aa6.28□□□□□ -1.4
LETM1-204ENST00000510940 KRTAP10-10P60014 251 aa6.27□□□□□ -1.41
LETM1-204ENST00000510940 CRIPTQ9P021 101 aa6.27□□□□□ -1.41
LETM1-204ENST00000510940 MT2AP02795 61 aa6.26□□□□□ -1.41
LETM1-204ENST00000510940 FSIP2Q5CZC0 6907 aa6.26□□□□□ -1.41
LETM1-204ENST00000510940 Q1T7F1 81 aa6.24□□□□□ -1.41
LETM1-204ENST00000510940 KRTAP3-2Q9BYR7 98 aa6.22□□□□□ -1.41
LETM1-204ENST00000510940 MT1FP04733 61 aa6.2□□□□□ -1.42
LETM1-204ENST00000510940 P0C880 135 aa6.19□□□□□ -1.42
LETM1-204ENST00000510940 CRCT1Q9UGL9 99 aa6.18□□□□□ -1.42
LETM1-204ENST00000510940 R4GN34 69 aa6.17□□□□□ -1.42
LETM1-204ENST00000510940 M0QZ58 72 aa6.16□□□□□ -1.42
LETM1-204ENST00000510940 A0A1B0GU33 70 aa6.15□□□□□ -1.42
LETM1-204ENST00000510940 PSPHP1O15172 72 aa6.09□□□□□ -1.43
LETM1-204ENST00000510940 SPRR2GQ9BYE4 73 aa6.08□□□□□ -1.44
LETM1-204ENST00000510940 KRTAP9-3Q9BYQ3 159 aa6.08□□□□□ -1.44
LETM1-204ENST00000510940 UQCR11O14957 56 aa6.07□□□□□ -1.44
LETM1-204ENST00000510940 Q5VV11 94 aa6.07□□□□□ -1.44
LETM1-204ENST00000510940 KRTAP9-7A8MTY7 169 aa6.02□□□□□ -1.45
LETM1-204ENST00000510940 KRTAP19-1Q8IUB9 90 aa6.01□□□□□ -1.45
LETM1-204ENST00000510940 LINC01554Q52M75 96 aa5.98□□□□□ -1.45
LETM1-204ENST00000510940 A6NED7 52 aa5.97□□□□□ -1.45
LETM1-204ENST00000510940 SPATA8Q6RVD6 105 aa5.97□□□□□ -1.45
LETM1-204ENST00000510940 A6NN06 94 aa5.95□□□□□ -1.46
LETM1-204ENST00000510940 MIR22HGQ0VDD5 57 aa5.95□□□□□ -1.46
LETM1-204ENST00000510940 KRTAP19-8Q3LI54 63 aa5.95□□□□□ -1.46
LETM1-204ENST00000510940 KRTAP13-4Q3LI77 160 aa5.95□□□□□ -1.46
LETM1-204ENST00000510940 PLAC4Q8WY50 150 aa5.92□□□□□ -1.46
LETM1-204ENST00000510940 LCE2BO14633 110 aa5.91□□□□□ -1.46
LETM1-204ENST00000510940 A0A0D9SG42 100 aa5.9□□□□□ -1.46
LETM1-204ENST00000510940 K7ERS5 55 aa5.85□□□□□ -1.47
LETM1-204ENST00000510940 A8MU10 97 aa5.83□□□□□ -1.48
LETM1-204ENST00000510940 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.82□□□□□ -1.48
LETM1-204ENST00000510940 MT1BP07438 61 aa5.82□□□□□ -1.48
LETM1-204ENST00000510940 CDC42SE1Q9NRR8 79 aa5.82□□□□□ -1.48
LETM1-204ENST00000510940 SPINT4Q6UDR6 99 aa5.81□□□□□ -1.48
LETM1-204ENST00000510940 KRTAP12-1P59990 96 aa5.78□□□□□ -1.48
LETM1-204ENST00000510940 USH2AO75445 5202 aa5.76□□□□□ -1.49
LETM1-204ENST00000510940 CAMK2N1Q7Z7J9 78 aa5.76□□□□□ -1.49
LETM1-204ENST00000510940 KRTAP19-6Q3LI70 58 aa5.74□□□□□ -1.49
LETM1-204ENST00000510940 PRO2289Q9P1D8 64 aa5.74□□□□□ -1.49
LETM1-204ENST00000510940 KRTAP12-2P59991 146 aa5.73□□□□□ -1.49
LETM1-204ENST00000510940 BRK1Q8WUW1 75 aa5.71□□□□□ -1.5
LETM1-204ENST00000510940 KRTAP10-5P60370 271 aa5.63□□□□□ -1.51
LETM1-204ENST00000510940 SSPOA2VEC9 5147 aa5.62□□□□□ -1.51
LETM1-204ENST00000510940 MT1XP80297 61 aa5.59□□□□□ -1.51
LETM1-204ENST00000510940 FCGBPQ9Y6R7 5405 aaPredicted RBP5.55□□□□□ -1.52
LETM1-204ENST00000510940 SYNE2Q8WXH0 6885 aaKnown RBP5.49□□□□□ -1.53
LETM1-204ENST00000510940 PRO0628Q9UI54 55 aa5.49□□□□□ -1.53
LETM1-204ENST00000510940 TNP1P09430 55 aa5.46□□□□□ -1.54
LETM1-204ENST00000510940 ROMO1P60602 79 aa5.45□□□□□ -1.54
LETM1-204ENST00000510940 C10orf95Q9H7T3 257 aa5.45□□□□□ -1.54
LETM1-204ENST00000510940 PMAIP1Q13794 54 aa5.42□□□□□ -1.54
LETM1-204ENST00000510940 KRTAP25-1Q3LHN0 102 aa5.41□□□□□ -1.54
LETM1-204ENST00000510940 KRTAP10-12P60413 245 aa5.35□□□□□ -1.55
LETM1-204ENST00000510940 MACF1Q9UPN3 7388 aaKnown RBP5.35□□□□□ -1.55
LETM1-204ENST00000510940 KRTAP10-7P60409 375 aaPredicted RBP5.33□□□□□ -1.56
LETM1-204ENST00000510940 KRTAP6-3Q3LI67 103 aa5.33□□□□□ -1.56
LETM1-204ENST00000510940 NEBP20929 6669 aa5.33□□□□□ -1.56
LETM1-204ENST00000510940 KRTAP23-1A1A580 65 aa5.26□□□□□ -1.57
LETM1-204ENST00000510940 PP632Q6XCG6 107 aa5.22□□□□□ -1.57
LETM1-204ENST00000510940 KRTAP8-1Q8IUC2 63 aa5.19□□□□□ -1.58
LETM1-204ENST00000510940 KRTAP20-1Q3LI63 56 aa5.18□□□□□ -1.58
LETM1-204ENST00000510940 KRTAP4-8A0A0G2JLE6 195 aa5.15□□□□□ -1.59
LETM1-204ENST00000510940 KRTAP5-9P26371 169 aa5.15□□□□□ -1.59
LETM1-204ENST00000510940 LCE3AQ5TA76 89 aa5.15□□□□□ -1.59
LETM1-204ENST00000510940 KRTAP4-8Q9BYQ9 185 aa5.15□□□□□ -1.59
LETM1-204ENST00000510940 KTN1-AS1Q86SY8 53 aa5.12□□□□□ -1.59
LETM1-204ENST00000510940 GPR98Q8WXG9 6306 aa5.06□□□□□ -1.6
LETM1-204ENST00000510940 SPRR2FQ96RM1 72 aa5.05□□□□□ -1.6
LETM1-204ENST00000510940 KRTAP12-3P60328 96 aa5.01□□□□□ -1.61
LETM1-204ENST00000510940 KRTAP19-5Q3LI72 72 aa5.01□□□□□ -1.61
LETM1-204ENST00000510940 KMT2DO14686 5537 aa4.99□□□□□ -1.61
LETM1-204ENST00000510940 KRTAP19-7Q3SYF9 63 aa4.98□□□□□ -1.61
LETM1-204ENST00000510940 PRAC1Q96KF2 57 aa4.98□□□□□ -1.61
LETM1-204ENST00000510940 MUC12Q9UKN1 5478 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms