RNA–Protein interactions for RNA: ENST00000509511.5

FGFR4-211, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 1 (best)

Gene FGFR4, Length 1,341 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-211ENST00000509511 A8MUN3 132 aa9.2□□□□□ -0.94
FGFR4-211ENST00000509511 LCE2BO14633 110 aa9.17□□□□□ -0.94
FGFR4-211ENST00000509511 SMIM20Q8N5G0 67 aa9.17□□□□□ -0.94
FGFR4-211ENST00000509511 KRTAP3-3Q9BYR6 98 aa9.12□□□□□ -0.95
FGFR4-211ENST00000509511 TRAV7A0A075B6U4 112 aa9.1□□□□□ -0.95
FGFR4-211ENST00000509511 NDUFC1O43677 76 aa9.09□□□□□ -0.95
FGFR4-211ENST00000509511 SERP2Q8N6R1 65 aa9.06□□□□□ -0.96
FGFR4-211ENST00000509511 ANAPC13Q9BS18 74 aa9.06□□□□□ -0.96
FGFR4-211ENST00000509511 SSPOA2VEC9 5147 aa9.06□□□□□ -0.96
FGFR4-211ENST00000509511 DMAC1Q96GE9 116 aa9.02□□□□□ -0.97
FGFR4-211ENST00000509511 COX7CP15954 63 aa8.98□□□□□ -0.97
FGFR4-211ENST00000509511 H0YAA0 97 aa8.92□□□□□ -0.98
FGFR4-211ENST00000509511 KRTAP19-1Q8IUB9 90 aa8.92□□□□□ -0.98
FGFR4-211ENST00000509511 SNURFQ9Y675 71 aa8.89□□□□□ -0.99
FGFR4-211ENST00000509511 C20orf197Q8N268 126 aa8.88□□□□□ -0.99
FGFR4-211ENST00000509511 SPRR2GQ9BYE4 73 aa8.88□□□□□ -0.99
FGFR4-211ENST00000509511 CRIPTQ9P021 101 aa8.87□□□□□ -0.99
FGFR4-211ENST00000509511 PCP4P48539 62 aa8.85□□□□□ -0.99
FGFR4-211ENST00000509511 KRTAP19-6Q3LI70 58 aa8.84□□□□□ -0.99
FGFR4-211ENST00000509511 CCDC179H3BU77 68 aa8.82□□□□□ -1
FGFR4-211ENST00000509511 ACYP2P14621 99 aa8.82□□□□□ -1
FGFR4-211ENST00000509511 ADM2Q7Z4H4 148 aa8.82□□□□□ -1
FGFR4-211ENST00000509511 FCGBPQ9Y6R7 5405 aaPredicted RBP8.82□□□□□ -1
FGFR4-211ENST00000509511 Q5VV11 94 aa8.8□□□□□ -1
FGFR4-211ENST00000509511 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.77□□□□□ -1.01
FGFR4-211ENST00000509511 KRTAP19-8Q3LI54 63 aa8.77□□□□□ -1.01
FGFR4-211ENST00000509511 SPANXA2-OT1Q8N9U9 137 aa8.76□□□□□ -1.01
FGFR4-211ENST00000509511 CHKB-CPT1BH3BT56 60 aa8.73□□□□□ -1.01
FGFR4-211ENST00000509511 SPTSSBQ8NFR3 76 aa8.73□□□□□ -1.01
FGFR4-211ENST00000509511 MT1BP07438 61 aa8.72□□□□□ -1.01
FGFR4-211ENST00000509511 KRTAP9-7A8MTY7 169 aa8.68□□□□□ -1.02
FGFR4-211ENST00000509511 CYSTM1Q9H1C7 97 aa8.68□□□□□ -1.02
FGFR4-211ENST00000509511 H7BZZ5 65 aa8.65□□□□□ -1.02
FGFR4-211ENST00000509511 P0C880 135 aa8.63□□□□□ -1.03
FGFR4-211ENST00000509511 R4GN34 69 aa8.61□□□□□ -1.03
FGFR4-211ENST00000509511 KRTAP3-2Q9BYR7 98 aa8.58□□□□□ -1.04
FGFR4-211ENST00000509511 A6NN06 94 aa8.57□□□□□ -1.04
FGFR4-211ENST00000509511 M0QZ58 72 aa8.55□□□□□ -1.04
FGFR4-211ENST00000509511 TMEM258P61165 79 aa8.54□□□□□ -1.04
FGFR4-211ENST00000509511 MACF1Q9UPN3 7388 aaKnown RBP8.53□□□□□ -1.04
FGFR4-211ENST00000509511 ATP5EP56381 51 aaPredicted RBP8.52□□□□□ -1.05
FGFR4-211ENST00000509511 COA5Q86WW8 74 aa8.5□□□□□ -1.05
FGFR4-211ENST00000509511 KRTAP10-5P60370 271 aa8.49□□□□□ -1.05
FGFR4-211ENST00000509511 PLAC4Q8WY50 150 aa8.42□□□□□ -1.06
FGFR4-211ENST00000509511 LINC01554Q52M75 96 aa8.41□□□□□ -1.06
FGFR4-211ENST00000509511 SYNE2Q8WXH0 6885 aaKnown RBP8.4□□□□□ -1.06
FGFR4-211ENST00000509511 PRO2289Q9P1D8 64 aa8.34□□□□□ -1.07
FGFR4-211ENST00000509511 SEC61GP60059 68 aa8.29□□□□□ -1.08
FGFR4-211ENST00000509511 SERP1Q9Y6X1 66 aa8.29□□□□□ -1.08
FGFR4-211ENST00000509511 MT1XP80297 61 aa8.26□□□□□ -1.09
FGFR4-211ENST00000509511 KRTAP6-3Q3LI67 103 aa8.22□□□□□ -1.09
FGFR4-211ENST00000509511 RPS28P62857 69 aaKnown RBP8.19□□□□□ -1.1
FGFR4-211ENST00000509511 KRTAP13-4Q3LI77 160 aa8.16□□□□□ -1.1
FGFR4-211ENST00000509511 A0A1B0GU69 56 aa8.07□□□□□ -1.12
FGFR4-211ENST00000509511 A0A1B0GU33 70 aa8.06□□□□□ -1.12
FGFR4-211ENST00000509511 SMIM26A0A096LP01 95 aa8.05□□□□□ -1.12
FGFR4-211ENST00000509511 KRTAP12-2P59991 146 aa8.03□□□□□ -1.12
FGFR4-211ENST00000509511 SPATA8Q6RVD6 105 aa8□□□□□ -1.13
FGFR4-211ENST00000509511 A0A0D9SG42 100 aa7.99□□□□□ -1.13
FGFR4-211ENST00000509511 CAMK2N1Q7Z7J9 78 aa7.98□□□□□ -1.13
FGFR4-211ENST00000509511 KRTAP5-9P26371 169 aa7.97□□□□□ -1.13
FGFR4-211ENST00000509511 V9GYY9 64 aa7.97□□□□□ -1.13
FGFR4-211ENST00000509511 LINC01558Q9Y6Z2 57 aa7.95□□□□□ -1.14
FGFR4-211ENST00000509511 PRR15LQ9BU68 103 aa7.94□□□□□ -1.14
FGFR4-211ENST00000509511 KMT2DO14686 5537 aa7.93□□□□□ -1.14
FGFR4-211ENST00000509511 Q1T7F1 81 aa7.93□□□□□ -1.14
FGFR4-211ENST00000509511 MUC12Q9UKN1 5478 aa7.91□□□□□ -1.14
FGFR4-211ENST00000509511 NEBP20929 6669 aa7.89□□□□□ -1.15
FGFR4-211ENST00000509511 KRTAP8-1Q8IUC2 63 aa7.88□□□□□ -1.15
FGFR4-211ENST00000509511 KRTAP10-7P60409 375 aaPredicted RBP7.87□□□□□ -1.15
FGFR4-211ENST00000509511 SPINT4Q6UDR6 99 aa7.86□□□□□ -1.15
FGFR4-211ENST00000509511 KRTAP10-12P60413 245 aa7.84□□□□□ -1.15
FGFR4-211ENST00000509511 SPRR2FQ96RM1 72 aa7.82□□□□□ -1.16
FGFR4-211ENST00000509511 KRTAP12-1P59990 96 aa7.81□□□□□ -1.16
FGFR4-211ENST00000509511 PSPHP1O15172 72 aa7.78□□□□□ -1.16
FGFR4-211ENST00000509511 KRTAP4-8A0A0G2JLE6 195 aa7.78□□□□□ -1.16
FGFR4-211ENST00000509511 KRTAP4-8Q9BYQ9 185 aa7.78□□□□□ -1.16
FGFR4-211ENST00000509511 MDN1Q9NU22 5596 aa7.77□□□□□ -1.17
FGFR4-211ENST00000509511 A8MU10 97 aa7.76□□□□□ -1.17
FGFR4-211ENST00000509511 UQCR11O14957 56 aa7.65□□□□□ -1.18
FGFR4-211ENST00000509511 SPRR2EP22531 72 aa7.64□□□□□ -1.19
FGFR4-211ENST00000509511 SPRR2BP35325 72 aa7.64□□□□□ -1.19
FGFR4-211ENST00000509511 SPRR2AP35326 72 aa7.64□□□□□ -1.19
FGFR4-211ENST00000509511 KRTAP20-1Q3LI63 56 aa7.58□□□□□ -1.2
FGFR4-211ENST00000509511 A6NED7 52 aa7.57□□□□□ -1.2
FGFR4-211ENST00000509511 LCE1AQ5T7P2 110 aa7.54□□□□□ -1.2
FGFR4-211ENST00000509511 MIR22HGQ0VDD5 57 aa7.52□□□□□ -1.2
FGFR4-211ENST00000509511 C10orf95Q9H7T3 257 aa7.42□□□□□ -1.22
FGFR4-211ENST00000509511 TNP1P09430 55 aa7.41□□□□□ -1.22
FGFR4-211ENST00000509511 CDC42SE1Q9NRR8 79 aa7.4□□□□□ -1.22
FGFR4-211ENST00000509511 KRTAP2-3P0C7H8 128 aa7.39□□□□□ -1.23
FGFR4-211ENST00000509511 SPRR2DP22532 72 aa7.39□□□□□ -1.23
FGFR4-211ENST00000509511 KRTAP2-4Q9BYR9 128 aa7.39□□□□□ -1.23
FGFR4-211ENST00000509511 KRTAP19-7Q3SYF9 63 aa7.36□□□□□ -1.23
FGFR4-211ENST00000509511 K7ERS5 55 aa7.35□□□□□ -1.23
FGFR4-211ENST00000509511 BRK1Q8WUW1 75 aa7.33□□□□□ -1.24
FGFR4-211ENST00000509511 MT1EP04732 61 aa7.31□□□□□ -1.24
FGFR4-211ENST00000509511 KRTAP19-5Q3LI72 72 aa7.26□□□□□ -1.25
FGFR4-211ENST00000509511 LCE3AQ5TA76 89 aa7.25□□□□□ -1.25
FGFR4-211ENST00000509511 KRTAP19-3Q7Z4W3 81 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms