RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 C5orf47Q569G3 176 aa4.1□□□□□ -1.75
PDLIM5-213ENST00000509357 LCA10Q71F78 164 aa4.1□□□□□ -1.75
PDLIM5-213ENST00000509357 KRTAP19-1Q8IUB9 90 aa4.1□□□□□ -1.75
PDLIM5-213ENST00000509357 ATOX1O00244 68 aa4.09□□□□□ -1.75
PDLIM5-213ENST00000509357 S4R3F8 94 aa4.09□□□□□ -1.75
PDLIM5-213ENST00000509357 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.08□□□□□ -1.76
PDLIM5-213ENST00000509357 CSAG1Q6PB30 78 aa4.07□□□□□ -1.76
PDLIM5-213ENST00000509357 MACF1Q9UPN3 7388 aaKnown RBP4.07□□□□□ -1.76
PDLIM5-213ENST00000509357 SCGB1A1P11684 91 aa4.06□□□□□ -1.76
PDLIM5-213ENST00000509357 TRAV7A0A075B6U4 112 aa4.05□□□□□ -1.76
PDLIM5-213ENST00000509357 MP68P56378 58 aa4.05□□□□□ -1.76
PDLIM5-213ENST00000509357 KRTAP9-7A8MTY7 169 aa4.04□□□□□ -1.76
PDLIM5-213ENST00000509357 H3BPC8 53 aa4.03□□□□□ -1.76
PDLIM5-213ENST00000509357 SYNE2Q8WXH0 6885 aaKnown RBP4.02□□□□□ -1.77
PDLIM5-213ENST00000509357 KRTAP19-6Q3LI70 58 aa4.01□□□□□ -1.77
PDLIM5-213ENST00000509357 SNURFQ9Y675 71 aa4.01□□□□□ -1.77
PDLIM5-213ENST00000509357 CYSTM1Q9H1C7 97 aa4□□□□□ -1.77
PDLIM5-213ENST00000509357 DMAC1Q96GE9 116 aa3.99□□□□□ -1.77
PDLIM5-213ENST00000509357 SMIM20Q8N5G0 67 aa3.98□□□□□ -1.77
PDLIM5-213ENST00000509357 SERP2Q8N6R1 65 aa3.98□□□□□ -1.77
PDLIM5-213ENST00000509357 A8MUN3 132 aa3.96□□□□□ -1.78
PDLIM5-213ENST00000509357 C20orf197Q8N268 126 aa3.96□□□□□ -1.78
PDLIM5-213ENST00000509357 NDUFC1O43677 76 aa3.94□□□□□ -1.78
PDLIM5-213ENST00000509357 Q5VV11 94 aa3.94□□□□□ -1.78
PDLIM5-213ENST00000509357 COX7CP15954 63 aa3.92□□□□□ -1.78
PDLIM5-213ENST00000509357 A6NN06 94 aa3.9□□□□□ -1.79
PDLIM5-213ENST00000509357 MT1BP07438 61 aa3.9□□□□□ -1.79
PDLIM5-213ENST00000509357 SPRR2GQ9BYE4 73 aa3.9□□□□□ -1.79
PDLIM5-213ENST00000509357 CRIPTQ9P021 101 aa3.89□□□□□ -1.79
PDLIM5-213ENST00000509357 H0YAA0 97 aa3.88□□□□□ -1.79
PDLIM5-213ENST00000509357 H7BZZ5 65 aa3.88□□□□□ -1.79
PDLIM5-213ENST00000509357 P0C880 135 aa3.87□□□□□ -1.79
PDLIM5-213ENST00000509357 KRTAP19-8Q3LI54 63 aa3.87□□□□□ -1.79
PDLIM5-213ENST00000509357 SPANXA2-OT1Q8N9U9 137 aa3.87□□□□□ -1.79
PDLIM5-213ENST00000509357 CCDC179H3BU77 68 aa3.86□□□□□ -1.79
PDLIM5-213ENST00000509357 ADM2Q7Z4H4 148 aa3.86□□□□□ -1.79
PDLIM5-213ENST00000509357 ACYP2P14621 99 aa3.84□□□□□ -1.79
PDLIM5-213ENST00000509357 ANAPC13Q9BS18 74 aa3.84□□□□□ -1.79
PDLIM5-213ENST00000509357 KRTAP6-3Q3LI67 103 aa3.83□□□□□ -1.8
PDLIM5-213ENST00000509357 KRTAP10-5P60370 271 aa3.8□□□□□ -1.8
PDLIM5-213ENST00000509357 COA5Q86WW8 74 aa3.79□□□□□ -1.8
PDLIM5-213ENST00000509357 NEBP20929 6669 aa3.78□□□□□ -1.8
PDLIM5-213ENST00000509357 R4GN34 69 aa3.76□□□□□ -1.81
PDLIM5-213ENST00000509357 MUC12Q9UKN1 5478 aa3.75□□□□□ -1.81
PDLIM5-213ENST00000509357 PLAC4Q8WY50 150 aa3.75□□□□□ -1.81
PDLIM5-213ENST00000509357 KRTAP13-4Q3LI77 160 aa3.74□□□□□ -1.81
PDLIM5-213ENST00000509357 CHKB-CPT1BH3BT56 60 aa3.73□□□□□ -1.81
PDLIM5-213ENST00000509357 M0QZ58 72 aa3.73□□□□□ -1.81
PDLIM5-213ENST00000509357 PRO2289Q9P1D8 64 aa3.72□□□□□ -1.81
PDLIM5-213ENST00000509357 LINC01554Q52M75 96 aa3.71□□□□□ -1.82
PDLIM5-213ENST00000509357 SPTSSBQ8NFR3 76 aa3.71□□□□□ -1.82
PDLIM5-213ENST00000509357 MT1XP80297 61 aa3.69□□□□□ -1.82
PDLIM5-213ENST00000509357 KRTAP4-8Q9BYQ9 185 aa3.67□□□□□ -1.82
PDLIM5-213ENST00000509357 KMT2DO14686 5537 aa3.65□□□□□ -1.82
PDLIM5-213ENST00000509357 MDN1Q9NU22 5596 aa3.65□□□□□ -1.83
PDLIM5-213ENST00000509357 KRTAP5-9P26371 169 aa3.62□□□□□ -1.83
PDLIM5-213ENST00000509357 TMEM258P61165 79 aa3.61□□□□□ -1.83
PDLIM5-213ENST00000509357 ATP5EP56381 51 aaPredicted RBP3.6□□□□□ -1.83
PDLIM5-213ENST00000509357 SPATA8Q6RVD6 105 aa3.59□□□□□ -1.83
PDLIM5-213ENST00000509357 KRTAP8-1Q8IUC2 63 aa3.58□□□□□ -1.84
PDLIM5-213ENST00000509357 SPRR2FQ96RM1 72 aa3.58□□□□□ -1.84
PDLIM5-213ENST00000509357 KRTAP20-1Q3LI63 56 aa3.57□□□□□ -1.84
PDLIM5-213ENST00000509357 KRTAP12-2P59991 146 aa3.54□□□□□ -1.84
PDLIM5-213ENST00000509357 A0A1B0GU33 70 aa3.53□□□□□ -1.84
PDLIM5-213ENST00000509357 SPRR2EP22531 72 aa3.53□□□□□ -1.84
PDLIM5-213ENST00000509357 SPRR2BP35325 72 aa3.53□□□□□ -1.84
PDLIM5-213ENST00000509357 SPRR2AP35326 72 aa3.53□□□□□ -1.84
PDLIM5-213ENST00000509357 KRTAP10-7P60409 375 aaPredicted RBP3.53□□□□□ -1.84
PDLIM5-213ENST00000509357 LINC01558Q9Y6Z2 57 aa3.53□□□□□ -1.84
PDLIM5-213ENST00000509357 A0A1B0GU69 56 aa3.52□□□□□ -1.85
PDLIM5-213ENST00000509357 A8MU10 97 aa3.52□□□□□ -1.85
PDLIM5-213ENST00000509357 SERP1Q9Y6X1 66 aa3.52□□□□□ -1.85
PDLIM5-213ENST00000509357 A0A0D9SG42 100 aa3.51□□□□□ -1.85
PDLIM5-213ENST00000509357 PCP4P48539 62 aa3.51□□□□□ -1.85
PDLIM5-213ENST00000509357 KRTAP12-1P59990 96 aa3.51□□□□□ -1.85
PDLIM5-213ENST00000509357 SEC61GP60059 68 aa3.51□□□□□ -1.85
PDLIM5-213ENST00000509357 KRTAP4-8A0A0G2JLE6 195 aa3.5□□□□□ -1.85
PDLIM5-213ENST00000509357 LCE3BQ5TA77 95 aa3.5□□□□□ -1.85
PDLIM5-213ENST00000509357 CAMK2N1Q7Z7J9 78 aa3.49□□□□□ -1.85
PDLIM5-213ENST00000509357 KRTAP2-3P0C7H8 128 aa3.47□□□□□ -1.85
PDLIM5-213ENST00000509357 KRTAP10-12P60413 245 aa3.47□□□□□ -1.85
PDLIM5-213ENST00000509357 KRTAP2-4Q9BYR9 128 aa3.47□□□□□ -1.85
PDLIM5-213ENST00000509357 LCE1AQ5T7P2 110 aa3.44□□□□□ -1.86
PDLIM5-213ENST00000509357 KRTAP9-9Q9BYP9 154 aa3.44□□□□□ -1.86
PDLIM5-213ENST00000509357 KRTAP9-4Q9BYQ2 154 aa3.44□□□□□ -1.86
PDLIM5-213ENST00000509357 SPRR2DP22532 72 aa3.42□□□□□ -1.86
PDLIM5-213ENST00000509357 SPINT4Q6UDR6 99 aa3.42□□□□□ -1.86
PDLIM5-213ENST00000509357 PRR15LQ9BU68 103 aa3.42□□□□□ -1.86
PDLIM5-213ENST00000509357 Q1T7F1 81 aa3.4□□□□□ -1.87
PDLIM5-213ENST00000509357 PSPHP1O15172 72 aa3.38□□□□□ -1.87
PDLIM5-213ENST00000509357 SMIM26A0A096LP01 95 aa3.37□□□□□ -1.87
PDLIM5-213ENST00000509357 C10orf95Q9H7T3 257 aa3.37□□□□□ -1.87
PDLIM5-213ENST00000509357 KRTAP2-2Q9BYT5 123 aa3.36□□□□□ -1.87
PDLIM5-213ENST00000509357 KRTAP2-1Q9BYU5 128 aa3.36□□□□□ -1.87
PDLIM5-213ENST00000509357 KRTAP4-7Q9BYR0 210 aa3.35□□□□□ -1.87
PDLIM5-213ENST00000509357 RPS28P62857 69 aaKnown RBP3.34□□□□□ -1.87
PDLIM5-213ENST00000509357 KRTAP4-12Q9BQ66 201 aa3.34□□□□□ -1.87
PDLIM5-213ENST00000509357 UQCR11O14957 56 aa3.33□□□□□ -1.88
PDLIM5-213ENST00000509357 KRTAP19-7Q3SYF9 63 aa3.31□□□□□ -1.88
PDLIM5-213ENST00000509357 MIR22HGQ0VDD5 57 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms