RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 LINC00208Q96KT6 92 aa5.02□□□□□ -1.61
PTPN20-220ENST00000508715 KRTAP9-8Q9BYQ0 159 aa5.02□□□□□ -1.61
PTPN20-220ENST00000508715 ATOX1O00244 68 aa5.01□□□□□ -1.61
PTPN20-220ENST00000508715 SCGB1A1P11684 91 aa5.01□□□□□ -1.61
PTPN20-220ENST00000508715 C5orf47Q569G3 176 aa5.01□□□□□ -1.61
PTPN20-220ENST00000508715 LCE4AQ5TA78 99 aa5.01□□□□□ -1.61
PTPN20-220ENST00000508715 KRTAP5-3Q6L8H2 238 aa5□□□□□ -1.61
PTPN20-220ENST00000508715 TRAV7A0A075B6U4 112 aa4.97□□□□□ -1.61
PTPN20-220ENST00000508715 MP68P56378 58 aa4.97□□□□□ -1.61
PTPN20-220ENST00000508715 MT2AP02795 61 aa4.96□□□□□ -1.62
PTPN20-220ENST00000508715 H3BPC8 53 aa4.95□□□□□ -1.62
PTPN20-220ENST00000508715 MT1FP04733 61 aa4.93□□□□□ -1.62
PTPN20-220ENST00000508715 SMIM20Q8N5G0 67 aa4.93□□□□□ -1.62
PTPN20-220ENST00000508715 LCE5AQ5TCM9 118 aa4.92□□□□□ -1.62
PTPN20-220ENST00000508715 LCA10Q71F78 164 aa4.91□□□□□ -1.62
PTPN20-220ENST00000508715 SERP2Q8N6R1 65 aa4.89□□□□□ -1.63
PTPN20-220ENST00000508715 S4R3F8 94 aa4.89□□□□□ -1.63
PTPN20-220ENST00000508715 SNURFQ9Y675 71 aa4.87□□□□□ -1.63
PTPN20-220ENST00000508715 KRTAP9-3Q9BYQ3 159 aa4.86□□□□□ -1.63
PTPN20-220ENST00000508715 A8MUN3 132 aa4.84□□□□□ -1.63
PTPN20-220ENST00000508715 C20orf197Q8N268 126 aa4.84□□□□□ -1.63
PTPN20-220ENST00000508715 DMAC1Q96GE9 116 aa4.84□□□□□ -1.63
PTPN20-220ENST00000508715 KRTAP10-10P60014 251 aa4.83□□□□□ -1.64
PTPN20-220ENST00000508715 FSIP2Q5CZC0 6907 aa4.81□□□□□ -1.64
PTPN20-220ENST00000508715 KRTAP9-7A8MTY7 169 aa4.81□□□□□ -1.64
PTPN20-220ENST00000508715 COX7CP15954 63 aa4.81□□□□□ -1.64
PTPN20-220ENST00000508715 CSAG1Q6PB30 78 aa4.81□□□□□ -1.64
PTPN20-220ENST00000508715 KRTAP19-4Q3LI73 84 aa4.8□□□□□ -1.64
PTPN20-220ENST00000508715 CYSTM1Q9H1C7 97 aa4.8□□□□□ -1.64
PTPN20-220ENST00000508715 USH2AO75445 5202 aa4.78□□□□□ -1.64
PTPN20-220ENST00000508715 NDUFC1O43677 76 aa4.75□□□□□ -1.65
PTPN20-220ENST00000508715 SPANXA2-OT1Q8N9U9 137 aa4.74□□□□□ -1.65
PTPN20-220ENST00000508715 ANAPC13Q9BS18 74 aa4.73□□□□□ -1.65
PTPN20-220ENST00000508715 H7BZZ5 65 aa4.72□□□□□ -1.65
PTPN20-220ENST00000508715 CCDC179H3BU77 68 aa4.71□□□□□ -1.66
PTPN20-220ENST00000508715 ACYP2P14621 99 aa4.71□□□□□ -1.66
PTPN20-220ENST00000508715 SSPOA2VEC9 5147 aa4.71□□□□□ -1.66
PTPN20-220ENST00000508715 H0YAA0 97 aa4.69□□□□□ -1.66
PTPN20-220ENST00000508715 CRCT1Q9UGL9 99 aa4.69□□□□□ -1.66
PTPN20-220ENST00000508715 ADM2Q7Z4H4 148 aa4.65□□□□□ -1.67
PTPN20-220ENST00000508715 SPRR2GQ9BYE4 73 aa4.65□□□□□ -1.67
PTPN20-220ENST00000508715 P0C880 135 aa4.64□□□□□ -1.67
PTPN20-220ENST00000508715 COA5Q86WW8 74 aa4.61□□□□□ -1.67
PTPN20-220ENST00000508715 MT1BP07438 61 aa4.6□□□□□ -1.67
PTPN20-220ENST00000508715 KRTAP19-8Q3LI54 63 aa4.6□□□□□ -1.67
PTPN20-220ENST00000508715 CHKB-CPT1BH3BT56 60 aa4.58□□□□□ -1.68
PTPN20-220ENST00000508715 CRIPTQ9P021 101 aa4.58□□□□□ -1.68
PTPN20-220ENST00000508715 KRTAP19-6Q3LI70 58 aa4.54□□□□□ -1.68
PTPN20-220ENST00000508715 SPTSSBQ8NFR3 76 aa4.54□□□□□ -1.68
PTPN20-220ENST00000508715 FCGBPQ9Y6R7 5405 aaPredicted RBP4.53□□□□□ -1.68
PTPN20-220ENST00000508715 Q5VV11 94 aa4.51□□□□□ -1.69
PTPN20-220ENST00000508715 M0QZ58 72 aa4.47□□□□□ -1.69
PTPN20-220ENST00000508715 ATP5EP56381 51 aaPredicted RBP4.47□□□□□ -1.69
PTPN20-220ENST00000508715 TMEM258P61165 79 aa4.47□□□□□ -1.69
PTPN20-220ENST00000508715 R4GN34 69 aa4.47□□□□□ -1.69
PTPN20-220ENST00000508715 KRTAP13-4Q3LI77 160 aa4.46□□□□□ -1.7
PTPN20-220ENST00000508715 KRTAP10-5P60370 271 aa4.41□□□□□ -1.7
PTPN20-220ENST00000508715 LINC01554Q52M75 96 aa4.38□□□□□ -1.71
PTPN20-220ENST00000508715 PCP4P48539 62 aa4.37□□□□□ -1.71
PTPN20-220ENST00000508715 MT1XP80297 61 aa4.37□□□□□ -1.71
PTPN20-220ENST00000508715 A6NN06 94 aa4.35□□□□□ -1.71
PTPN20-220ENST00000508715 MACF1Q9UPN3 7388 aaKnown RBP4.35□□□□□ -1.71
PTPN20-220ENST00000508715 SERP1Q9Y6X1 66 aa4.34□□□□□ -1.71
PTPN20-220ENST00000508715 SYNE2Q8WXH0 6885 aaKnown RBP4.33□□□□□ -1.72
PTPN20-220ENST00000508715 SEC61GP60059 68 aa4.33□□□□□ -1.72
PTPN20-220ENST00000508715 SPATA8Q6RVD6 105 aa4.33□□□□□ -1.72
PTPN20-220ENST00000508715 PLAC4Q8WY50 150 aa4.33□□□□□ -1.72
PTPN20-220ENST00000508715 LINC01558Q9Y6Z2 57 aa4.33□□□□□ -1.72
PTPN20-220ENST00000508715 A0A1B0GU33 70 aa4.32□□□□□ -1.72
PTPN20-220ENST00000508715 A0A1B0GU69 56 aa4.32□□□□□ -1.72
PTPN20-220ENST00000508715 A0A0D9SG42 100 aa4.25□□□□□ -1.73
PTPN20-220ENST00000508715 A8MU10 97 aa4.23□□□□□ -1.73
PTPN20-220ENST00000508715 KRTAP12-1P59990 96 aa4.22□□□□□ -1.73
PTPN20-220ENST00000508715 PRO2289Q9P1D8 64 aa4.21□□□□□ -1.74
PTPN20-220ENST00000508715 KRTAP12-2P59991 146 aa4.2□□□□□ -1.74
PTPN20-220ENST00000508715 PRR15LQ9BU68 103 aa4.2□□□□□ -1.74
PTPN20-220ENST00000508715 Q1T7F1 81 aa4.19□□□□□ -1.74
PTPN20-220ENST00000508715 KMT2DO14686 5537 aa4.18□□□□□ -1.74
PTPN20-220ENST00000508715 KRTAP10-7P60409 375 aaPredicted RBP4.17□□□□□ -1.74
PTPN20-220ENST00000508715 RPS28P62857 69 aaKnown RBP4.17□□□□□ -1.74
PTPN20-220ENST00000508715 SMIM26A0A096LP01 95 aa4.16□□□□□ -1.74
PTPN20-220ENST00000508715 KRTAP6-3Q3LI67 103 aa4.15□□□□□ -1.75
PTPN20-220ENST00000508715 SPINT4Q6UDR6 99 aa4.15□□□□□ -1.75
PTPN20-220ENST00000508715 PSPHP1O15172 72 aa4.14□□□□□ -1.75
PTPN20-220ENST00000508715 KRTAP10-12P60413 245 aa4.13□□□□□ -1.75
PTPN20-220ENST00000508715 UQCR11O14957 56 aa4.12□□□□□ -1.75
PTPN20-220ENST00000508715 CAMK2N1Q7Z7J9 78 aa4.12□□□□□ -1.75
PTPN20-220ENST00000508715 V9GYY9 64 aa4.12□□□□□ -1.75
PTPN20-220ENST00000508715 MUC12Q9UKN1 5478 aa4.09□□□□□ -1.75
PTPN20-220ENST00000508715 KRTAP5-9P26371 169 aa4.08□□□□□ -1.76
PTPN20-220ENST00000508715 MIR22HGQ0VDD5 57 aa4.06□□□□□ -1.76
PTPN20-220ENST00000508715 NEBP20929 6669 aa4.06□□□□□ -1.76
PTPN20-220ENST00000508715 C10orf95Q9H7T3 257 aa4.04□□□□□ -1.76
PTPN20-220ENST00000508715 KRTAP8-1Q8IUC2 63 aa4.01□□□□□ -1.77
PTPN20-220ENST00000508715 MDN1Q9NU22 5596 aa3.98□□□□□ -1.77
PTPN20-220ENST00000508715 A6NED7 52 aa3.97□□□□□ -1.77
PTPN20-220ENST00000508715 SPRR2FQ96RM1 72 aa3.97□□□□□ -1.77
PTPN20-220ENST00000508715 H3BS24 57 aa3.95□□□□□ -1.78
PTPN20-220ENST00000508715 KRTAP19-7Q3SYF9 63 aa3.91□□□□□ -1.78
PTPN20-220ENST00000508715 LCE1AQ5T7P2 110 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms