RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 FAM236AA0A1B0GUQ0 79 aa2.9□□□□□ -1.95
HMGB1P44-201ENST00000508597 FAM236BA0A1B0GV22 79 aa2.9□□□□□ -1.95
HMGB1P44-201ENST00000508597 HCG22E2RYF7 251 aa2.9□□□□□ -1.95
HMGB1P44-201ENST00000508597 PCOTHQ58A44 107 aa2.9□□□□□ -1.95
HMGB1P44-201ENST00000508597 CASC2Q6XLA1 102 aa2.9□□□□□ -1.95
HMGB1P44-201ENST00000508597 Q8N9L7 120 aa2.89□□□□□ -1.95
HMGB1P44-201ENST00000508597 A0A0U1RQV1 116 aa2.88□□□□□ -1.95
HMGB1P44-201ENST00000508597 WFDC13Q8IUB5 93 aa2.88□□□□□ -1.95
HMGB1P44-201ENST00000508597 SMIM20Q8N5G0 67 aa2.88□□□□□ -1.95
HMGB1P44-201ENST00000508597 ZCCHC13Q8WW36 166 aaKnown RBP2.88□□□□□ -1.95
HMGB1P44-201ENST00000508597 TP53AIP1Q9HCN2 124 aa2.88□□□□□ -1.95
HMGB1P44-201ENST00000508597 NDUFS5O43920 106 aa2.87□□□□□ -1.95
HMGB1P44-201ENST00000508597 COX7CP15954 63 aa2.87□□□□□ -1.95
HMGB1P44-201ENST00000508597 TMEM258P61165 79 aa2.87□□□□□ -1.95
HMGB1P44-201ENST00000508597 HIST1H4AP62805 103 aaKnown RBP2.87□□□□□ -1.95
HMGB1P44-201ENST00000508597 MUC2Q02817 5179 aa2.86□□□□□ -1.95
HMGB1P44-201ENST00000508597 RPS28P62857 69 aaKnown RBP2.86□□□□□ -1.95
HMGB1P44-201ENST00000508597 A8MU10 97 aa2.84□□□□□ -1.95
HMGB1P44-201ENST00000508597 SERP2Q8N6R1 65 aa2.84□□□□□ -1.95
HMGB1P44-201ENST00000508597 C5orf47Q569G3 176 aa2.83□□□□□ -1.96
HMGB1P44-201ENST00000508597 KRTAP4-1Q9BYQ7 146 aa2.83□□□□□ -1.96
HMGB1P44-201ENST00000508597 SPINK7P58062 85 aa2.82□□□□□ -1.96
HMGB1P44-201ENST00000508597 FLGP20930 4061 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P44-201ENST00000508597 A0A087WVE0 104 aa2.81□□□□□ -1.96
HMGB1P44-201ENST00000508597 KRTAP12-2P59991 146 aa2.81□□□□□ -1.96
HMGB1P44-201ENST00000508597 C7orf65Q6ZTY9 151 aa2.81□□□□□ -1.96
HMGB1P44-201ENST00000508597 RBM12B-AS1Q9P1G2 102 aa2.81□□□□□ -1.96
HMGB1P44-201ENST00000508597 FAT4Q6V0I7 4981 aa2.8□□□□□ -1.96
HMGB1P44-201ENST00000508597 TRAV22A0A0B4J277 110 aa2.8□□□□□ -1.96
HMGB1P44-201ENST00000508597 Q5W150 140 aa2.8□□□□□ -1.96
HMGB1P44-201ENST00000508597 LOC101927531A0A1B0GV80 90 aa2.79□□□□□ -1.96
HMGB1P44-201ENST00000508597 HRES1P13985 223 aa2.79□□□□□ -1.96
HMGB1P44-201ENST00000508597 ATP5EP56381 51 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P44-201ENST00000508597 SEC61GP60059 68 aa2.79□□□□□ -1.96
HMGB1P44-201ENST00000508597 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.96
HMGB1P44-201ENST00000508597 FAM236DA0A1B0GTK5 79 aa2.78□□□□□ -1.96
HMGB1P44-201ENST00000508597 H3BPC8 53 aa2.78□□□□□ -1.96
HMGB1P44-201ENST00000508597 NDUFC1O43677 76 aa2.78□□□□□ -1.96
HMGB1P44-201ENST00000508597 FAM236CP0DP71 79 aa2.78□□□□□ -1.96
HMGB1P44-201ENST00000508597 MP68P56378 58 aa2.78□□□□□ -1.96
HMGB1P44-201ENST00000508597 COX6B2Q6YFQ2 88 aa2.78□□□□□ -1.96
HMGB1P44-201ENST00000508597 TRAV7A0A075B6U4 112 aa2.77□□□□□ -1.97
HMGB1P44-201ENST00000508597 H0Y9P7 68 aa2.76□□□□□ -1.97
HMGB1P44-201ENST00000508597 KLKP1Q107X0 134 aa2.76□□□□□ -1.97
HMGB1P44-201ENST00000508597 KRTAP19-2Q3LHN2 52 aa2.76□□□□□ -1.97
HMGB1P44-201ENST00000508597 SERP1Q9Y6X1 66 aa2.76□□□□□ -1.97
HMGB1P44-201ENST00000508597 KRTAP4-3Q9BYR4 195 aa2.75□□□□□ -1.97
HMGB1P44-201ENST00000508597 CYP4F30PQ9H0H9 118 aa2.75□□□□□ -1.97
HMGB1P44-201ENST00000508597 C20orf197Q8N268 126 aa2.74□□□□□ -1.97
HMGB1P44-201ENST00000508597 C1orf64Q8NEQ6 169 aa2.74□□□□□ -1.97
HMGB1P44-201ENST00000508597 SMIM26A0A096LP01 95 aa2.73□□□□□ -1.97
HMGB1P44-201ENST00000508597 LINC00208Q96KT6 92 aa2.73□□□□□ -1.97
HMGB1P44-201ENST00000508597 H7BZZ5 65 aa2.72□□□□□ -1.97
HMGB1P44-201ENST00000508597 H1FX-AS1Q4G0G2 97 aa2.72□□□□□ -1.97
HMGB1P44-201ENST00000508597 CYSTM1Q9H1C7 97 aa2.72□□□□□ -1.97
HMGB1P44-201ENST00000508597 MT1HP80294 61 aa2.71□□□□□ -1.98
HMGB1P44-201ENST00000508597 C4orf26Q17RF5 130 aa2.71□□□□□ -1.98
HMGB1P44-201ENST00000508597 A8MUN3 132 aa2.7□□□□□ -1.98
HMGB1P44-201ENST00000508597 M0R2T5 61 aa2.7□□□□□ -1.98
HMGB1P44-201ENST00000508597 KRTAP5-2Q701N4 177 aa2.7□□□□□ -1.98
HMGB1P44-201ENST00000508597 PRO0628Q9UI54 55 aa2.7□□□□□ -1.98
HMGB1P44-201ENST00000508597 CAMK2N1Q7Z7J9 78 aa2.68□□□□□ -1.98
HMGB1P44-201ENST00000508597 SNURFQ9Y675 71 aa2.66□□□□□ -1.98
HMGB1P44-201ENST00000508597 SPANXA2-OT1Q8N9U9 137 aa2.65□□□□□ -1.99
HMGB1P44-201ENST00000508597 S4R3F8 94 aa2.65□□□□□ -1.99
HMGB1P44-201ENST00000508597 DMAC1Q96GE9 116 aa2.64□□□□□ -1.99
HMGB1P44-201ENST00000508597 ACYP2P14621 99 aa2.63□□□□□ -1.99
HMGB1P44-201ENST00000508597 LCE3AQ5TA76 89 aa2.63□□□□□ -1.99
HMGB1P44-201ENST00000508597 CSAG1Q6PB30 78 aa2.63□□□□□ -1.99
HMGB1P44-201ENST00000508597 V9GYY9 64 aa2.62□□□□□ -1.99
HMGB1P44-201ENST00000508597 FSIP2Q5CZC0 6907 aa2.61□□□□□ -1.99
HMGB1P44-201ENST00000508597 LCA10Q71F78 164 aa2.61□□□□□ -1.99
HMGB1P44-201ENST00000508597 BRK1Q8WUW1 75 aa2.61□□□□□ -1.99
HMGB1P44-201ENST00000508597 Q1T7F1 81 aa2.6□□□□□ -1.99
HMGB1P44-201ENST00000508597 SPTSSBQ8NFR3 76 aa2.59□□□□□ -1.99
HMGB1P44-201ENST00000508597 H0YAA0 97 aa2.57□□□□□ -2
HMGB1P44-201ENST00000508597 CHKB-CPT1BH3BT56 60 aa2.56□□□□□ -2
HMGB1P44-201ENST00000508597 MT2AP02795 61 aa2.56□□□□□ -2
HMGB1P44-201ENST00000508597 KRTAP10-10P60014 251 aa2.56□□□□□ -2
HMGB1P44-201ENST00000508597 CRCT1Q9UGL9 99 aa2.55□□□□□ -2
HMGB1P44-201ENST00000508597 MT1FP04733 61 aa2.53□□□□□ -2
HMGB1P44-201ENST00000508597 PMAIP1Q13794 54 aa2.53□□□□□ -2
HMGB1P44-201ENST00000508597 CRIPTQ9P021 101 aa2.53□□□□□ -2
HMGB1P44-201ENST00000508597 COA5Q86WW8 74 aa2.52□□□□□ -2.01
HMGB1P44-201ENST00000508597 PSPHP1O15172 72 aa2.5□□□□□ -2.01
HMGB1P44-201ENST00000508597 Q5VV11 94 aa2.5□□□□□ -2.01
HMGB1P44-201ENST00000508597 ADM2Q7Z4H4 148 aa2.49□□□□□ -2.01
HMGB1P44-201ENST00000508597 PRR15LQ9BU68 103 aa2.49□□□□□ -2.01
HMGB1P44-201ENST00000508597 KTN1-AS1Q86SY8 53 aa2.48□□□□□ -2.01
HMGB1P44-201ENST00000508597 KRTAP5-5Q701N2 237 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P44-201ENST00000508597 SPRR2GQ9BYE4 73 aa2.47□□□□□ -2.01
HMGB1P44-201ENST00000508597 CDC42SE1Q9NRR8 79 aa2.47□□□□□ -2.01
HMGB1P44-201ENST00000508597 A6NED7 52 aa2.46□□□□□ -2.02
HMGB1P44-201ENST00000508597 LINC01558Q9Y6Z2 57 aa2.46□□□□□ -2.02
HMGB1P44-201ENST00000508597 R4GN34 69 aa2.45□□□□□ -2.02
HMGB1P44-201ENST00000508597 USH2AO75445 5202 aa2.44□□□□□ -2.02
HMGB1P44-201ENST00000508597 M0QZ58 72 aa2.44□□□□□ -2.02
HMGB1P44-201ENST00000508597 P0C880 135 aa2.44□□□□□ -2.02
HMGB1P44-201ENST00000508597 KRTAP19-8Q3LI54 63 aa2.43□□□□□ -2.02
HMGB1P44-201ENST00000508597 LCE3DQ9BYE3 92 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms