RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 LCA10Q71F78 164 aa8.56□□□□□ -1.04
RNF4-209ENST00000507784 FAT4Q6V0I7 4981 aa8.51□□□□□ -1.05
RNF4-209ENST00000507784 MT1HP80294 61 aa8.51□□□□□ -1.05
RNF4-209ENST00000507784 M0R2T5 61 aa8.5□□□□□ -1.05
RNF4-209ENST00000507784 SPTSSBQ8NFR3 76 aa8.47□□□□□ -1.05
RNF4-209ENST00000507784 KRTAP3-3Q9BYR6 98 aa8.47□□□□□ -1.05
RNF4-209ENST00000507784 SERP1Q9Y6X1 66 aa8.47□□□□□ -1.05
RNF4-209ENST00000507784 CSAG1Q6PB30 78 aa8.46□□□□□ -1.06
RNF4-209ENST00000507784 FLGP20930 4061 aaPredicted RBP8.44□□□□□ -1.06
RNF4-209ENST00000507784 LCE2AQ5TA79 106 aaPredicted RBP8.31□□□□□ -1.08
RNF4-209ENST00000507784 RPS28P62857 69 aaKnown RBP8.3□□□□□ -1.08
RNF4-209ENST00000507784 KRTAP10-6P60371 365 aaPredicted RBP8.24□□□□□ -1.09
RNF4-209ENST00000507784 ADM2Q7Z4H4 148 aa8.22□□□□□ -1.09
RNF4-209ENST00000507784 SMIM26A0A096LP01 95 aa8.21□□□□□ -1.1
RNF4-209ENST00000507784 SEC61GP60059 68 aa8.2□□□□□ -1.1
RNF4-209ENST00000507784 H0YAA0 97 aa8.17□□□□□ -1.1
RNF4-209ENST00000507784 LORP23490 312 aaPredicted RBP8.17□□□□□ -1.1
RNF4-209ENST00000507784 A0A1B0GU69 56 aa8.15□□□□□ -1.1
RNF4-209ENST00000507784 LINC01558Q9Y6Z2 57 aa8.15□□□□□ -1.1
RNF4-209ENST00000507784 KRTAP9-8Q9BYQ0 159 aa8.14□□□□□ -1.11
RNF4-209ENST00000507784 MT2AP02795 61 aa8.12□□□□□ -1.11
RNF4-209ENST00000507784 V9GYY9 64 aa8.12□□□□□ -1.11
RNF4-209ENST00000507784 KRTAP3-2Q9BYR7 98 aa8.11□□□□□ -1.11
RNF4-209ENST00000507784 P0C880 135 aa8.1□□□□□ -1.11
RNF4-209ENST00000507784 KRTAP10-10P60014 251 aa8.1□□□□□ -1.11
RNF4-209ENST00000507784 Q1T7F1 81 aa8.09□□□□□ -1.11
RNF4-209ENST00000507784 PRR15LQ9BU68 103 aa8.09□□□□□ -1.11
RNF4-209ENST00000507784 MT1FP04733 61 aa8.06□□□□□ -1.12
RNF4-209ENST00000507784 PSPHP1O15172 72 aa8.01□□□□□ -1.13
RNF4-209ENST00000507784 A0A1B0GU33 70 aa7.97□□□□□ -1.13
RNF4-209ENST00000507784 CRIPTQ9P021 101 aa7.95□□□□□ -1.14
RNF4-209ENST00000507784 R4GN34 69 aa7.94□□□□□ -1.14
RNF4-209ENST00000507784 M0QZ58 72 aa7.93□□□□□ -1.14
RNF4-209ENST00000507784 Q5VV11 94 aa7.89□□□□□ -1.15
RNF4-209ENST00000507784 SPATA8Q6RVD6 105 aa7.85□□□□□ -1.15
RNF4-209ENST00000507784 KRTAP9-3Q9BYQ3 159 aa7.85□□□□□ -1.15
RNF4-209ENST00000507784 UQCR11O14957 56 aa7.83□□□□□ -1.16
RNF4-209ENST00000507784 KRTAP13-4Q3LI77 160 aa7.83□□□□□ -1.16
RNF4-209ENST00000507784 LINC01554Q52M75 96 aa7.82□□□□□ -1.16
RNF4-209ENST00000507784 KRTAP19-1Q8IUB9 90 aa7.8□□□□□ -1.16
RNF4-209ENST00000507784 SPRR2GQ9BYE4 73 aa7.8□□□□□ -1.16
RNF4-209ENST00000507784 A6NED7 52 aa7.78□□□□□ -1.16
RNF4-209ENST00000507784 A0A0D9SG42 100 aa7.75□□□□□ -1.17
RNF4-209ENST00000507784 MIR22HGQ0VDD5 57 aa7.74□□□□□ -1.17
RNF4-209ENST00000507784 A8MU10 97 aa7.7□□□□□ -1.18
RNF4-209ENST00000507784 LCE2DQ5TA82 110 aaPredicted RBP7.7□□□□□ -1.18
RNF4-209ENST00000507784 LCE2BO14633 110 aa7.68□□□□□ -1.18
RNF4-209ENST00000507784 KRTAP19-8Q3LI54 63 aa7.65□□□□□ -1.18
RNF4-209ENST00000507784 SPINT4Q6UDR6 99 aa7.6□□□□□ -1.19
RNF4-209ENST00000507784 PLAC4Q8WY50 150 aa7.6□□□□□ -1.19
RNF4-209ENST00000507784 MT1BP07438 61 aa7.57□□□□□ -1.2
RNF4-209ENST00000507784 A6NN06 94 aa7.56□□□□□ -1.2
RNF4-209ENST00000507784 CDC42SE1Q9NRR8 79 aa7.56□□□□□ -1.2
RNF4-209ENST00000507784 KRTAP12-1P59990 96 aa7.53□□□□□ -1.2
RNF4-209ENST00000507784 KRTAP9-2Q9BYQ4 174 aa7.52□□□□□ -1.21
RNF4-209ENST00000507784 KRTAP12-2P59991 146 aa7.51□□□□□ -1.21
RNF4-209ENST00000507784 USH2AO75445 5202 aa7.5□□□□□ -1.21
RNF4-209ENST00000507784 BRK1Q8WUW1 75 aa7.5□□□□□ -1.21
RNF4-209ENST00000507784 K7ERS5 55 aa7.47□□□□□ -1.21
RNF4-209ENST00000507784 CAMK2N1Q7Z7J9 78 aa7.44□□□□□ -1.22
RNF4-209ENST00000507784 FSIP2Q5CZC0 6907 aa7.28□□□□□ -1.24
RNF4-209ENST00000507784 SSPOA2VEC9 5147 aa7.28□□□□□ -1.24
RNF4-209ENST00000507784 KRTAP19-6Q3LI70 58 aa7.27□□□□□ -1.25
RNF4-209ENST00000507784 MT1XP80297 61 aa7.26□□□□□ -1.25
RNF4-209ENST00000507784 PRO2289Q9P1D8 64 aa7.26□□□□□ -1.25
RNF4-209ENST00000507784 KRTAP10-5P60370 271 aa7.25□□□□□ -1.25
RNF4-209ENST00000507784 CRCT1Q9UGL9 99 aa7.23□□□□□ -1.25
RNF4-209ENST00000507784 C10orf95Q9H7T3 257 aa7.15□□□□□ -1.26
RNF4-209ENST00000507784 PRO0628Q9UI54 55 aa7.15□□□□□ -1.26
RNF4-209ENST00000507784 ROMO1P60602 79 aa7.08□□□□□ -1.28
RNF4-209ENST00000507784 PMAIP1Q13794 54 aa7.08□□□□□ -1.28
RNF4-209ENST00000507784 KRTAP9-6A0A140TA67 174 aa7.05□□□□□ -1.28
RNF4-209ENST00000507784 FCGBPQ9Y6R7 5405 aaPredicted RBP7.01□□□□□ -1.29
RNF4-209ENST00000507784 TNP1P09430 55 aa7.01□□□□□ -1.29
RNF4-209ENST00000507784 KRTAP10-7P60409 375 aaPredicted RBP6.98□□□□□ -1.29
RNF4-209ENST00000507784 KRTAP25-1Q3LHN0 102 aa6.92□□□□□ -1.3
RNF4-209ENST00000507784 KRTAP10-12P60413 245 aa6.89□□□□□ -1.31
RNF4-209ENST00000507784 KRTAP4-8A0A0G2JLE6 195 aa6.78□□□□□ -1.32
RNF4-209ENST00000507784 KRTAP4-8Q9BYQ9 185 aa6.78□□□□□ -1.32
RNF4-209ENST00000507784 LCE3AQ5TA76 89 aa6.74□□□□□ -1.33
RNF4-209ENST00000507784 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.69□□□□□ -1.34
RNF4-209ENST00000507784 KRTAP8-1Q8IUC2 63 aa6.68□□□□□ -1.34
RNF4-209ENST00000507784 KTN1-AS1Q86SY8 53 aa6.67□□□□□ -1.34
RNF4-209ENST00000507784 PRAC1Q96KF2 57 aa6.67□□□□□ -1.34
RNF4-209ENST00000507784 KRTAP23-1A1A580 65 aa6.65□□□□□ -1.34
RNF4-209ENST00000507784 KMT2DO14686 5537 aa6.64□□□□□ -1.35
RNF4-209ENST00000507784 MACF1Q9UPN3 7388 aaKnown RBP6.64□□□□□ -1.35
RNF4-209ENST00000507784 PP632Q6XCG6 107 aa6.62□□□□□ -1.35
RNF4-209ENST00000507784 KRTAP19-5Q3LI72 72 aa6.54□□□□□ -1.36
RNF4-209ENST00000507784 SYNE2Q8WXH0 6885 aaKnown RBP6.54□□□□□ -1.36
RNF4-209ENST00000507784 SPRR2FQ96RM1 72 aa6.49□□□□□ -1.37
RNF4-209ENST00000507784 KRTAP12-3P60328 96 aa6.47□□□□□ -1.37
RNF4-209ENST00000507784 KRTAP6-3Q3LI67 103 aa6.47□□□□□ -1.37
RNF4-209ENST00000507784 KRTAP19-7Q3SYF9 63 aa6.47□□□□□ -1.37
RNF4-209ENST00000507784 KRTAP9-7A8MTY7 169 aa6.41□□□□□ -1.38
RNF4-209ENST00000507784 KRTAP5-9P26371 169 aa6.41□□□□□ -1.38
RNF4-209ENST00000507784 MT1EP04732 61 aa6.39□□□□□ -1.39
RNF4-209ENST00000507784 SVIPQ8NHG7 77 aa6.38□□□□□ -1.39
RNF4-209ENST00000507784 KRTAP15-1Q3LI76 137 aa6.28□□□□□ -1.4
RNF4-209ENST00000507784 SPRR2EP22531 72 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms