RNA–Protein interactions for RNA: ENST00000506388.2

RCN1-202, Transcript of reticulocalbin 1, humanhuman

TSL 1 (best)

Gene RCN1, Length 1,658 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-202ENST00000506388 Q5VV11 94 aa6.79□□□□□ -1.32
RCN1-202ENST00000506388 A8MUN3 132 aa6.78□□□□□ -1.32
RCN1-202ENST00000506388 PSPHP1O15172 72 aa6.78□□□□□ -1.32
RCN1-202ENST00000506388 RBM12B-AS1Q9P1G2 102 aa6.77□□□□□ -1.32
RCN1-202ENST00000506388 BRK1Q8WUW1 75 aa6.77□□□□□ -1.33
RCN1-202ENST00000506388 LCE2CQ5TA81 110 aa6.73□□□□□ -1.33
RCN1-202ENST00000506388 PRR15LQ9BU68 103 aa6.73□□□□□ -1.33
RCN1-202ENST00000506388 COX6B2Q6YFQ2 88 aa6.71□□□□□ -1.33
RCN1-202ENST00000506388 CHKB-CPT1BH3BT56 60 aa6.69□□□□□ -1.34
RCN1-202ENST00000506388 FAT4Q6V0I7 4981 aa6.69□□□□□ -1.34
RCN1-202ENST00000506388 FLGP20930 4061 aaPredicted RBP6.68□□□□□ -1.34
RCN1-202ENST00000506388 KRTAP3-1Q9BYR8 98 aa6.65□□□□□ -1.34
RCN1-202ENST00000506388 H1FX-AS1Q4G0G2 97 aa6.64□□□□□ -1.35
RCN1-202ENST00000506388 A6NED7 52 aa6.6□□□□□ -1.35
RCN1-202ENST00000506388 MT1HP80294 61 aa6.6□□□□□ -1.35
RCN1-202ENST00000506388 CDC42SE1Q9NRR8 79 aa6.6□□□□□ -1.35
RCN1-202ENST00000506388 LCE2AQ5TA79 106 aaPredicted RBP6.59□□□□□ -1.35
RCN1-202ENST00000506388 LCA10Q71F78 164 aa6.57□□□□□ -1.36
RCN1-202ENST00000506388 SPTSSBQ8NFR3 76 aa6.56□□□□□ -1.36
RCN1-202ENST00000506388 A0A1B0GU69 56 aa6.54□□□□□ -1.36
RCN1-202ENST00000506388 S4R3F8 94 aa6.49□□□□□ -1.37
RCN1-202ENST00000506388 A8MU10 97 aa6.48□□□□□ -1.37
RCN1-202ENST00000506388 SPATA8Q6RVD6 105 aa6.45□□□□□ -1.38
RCN1-202ENST00000506388 M0R2T5 61 aa6.45□□□□□ -1.38
RCN1-202ENST00000506388 UQCR11O14957 56 aa6.44□□□□□ -1.38
RCN1-202ENST00000506388 PMAIP1Q13794 54 aa6.44□□□□□ -1.38
RCN1-202ENST00000506388 KRTAP3-3Q9BYR6 98 aa6.44□□□□□ -1.38
RCN1-202ENST00000506388 SEC61GP60059 68 aa6.43□□□□□ -1.38
RCN1-202ENST00000506388 CSAG1Q6PB30 78 aa6.42□□□□□ -1.38
RCN1-202ENST00000506388 LORP23490 312 aaPredicted RBP6.39□□□□□ -1.39
RCN1-202ENST00000506388 KRTAP10-6P60371 365 aaPredicted RBP6.39□□□□□ -1.39
RCN1-202ENST00000506388 A6NN06 94 aa6.39□□□□□ -1.39
RCN1-202ENST00000506388 MIR22HGQ0VDD5 57 aa6.37□□□□□ -1.39
RCN1-202ENST00000506388 LCE2DQ5TA82 110 aaPredicted RBP6.34□□□□□ -1.39
RCN1-202ENST00000506388 KRTAP9-8Q9BYQ0 159 aa6.33□□□□□ -1.4
RCN1-202ENST00000506388 H0YAA0 97 aa6.3□□□□□ -1.4
RCN1-202ENST00000506388 KTN1-AS1Q86SY8 53 aa6.3□□□□□ -1.4
RCN1-202ENST00000506388 MT2AP02795 61 aa6.26□□□□□ -1.41
RCN1-202ENST00000506388 A0A1B0GU33 70 aa6.26□□□□□ -1.41
RCN1-202ENST00000506388 MT1FP04733 61 aa6.2□□□□□ -1.42
RCN1-202ENST00000506388 KRTAP10-10P60014 251 aa6.17□□□□□ -1.42
RCN1-202ENST00000506388 ADM2Q7Z4H4 148 aa6.14□□□□□ -1.43
RCN1-202ENST00000506388 CRIPTQ9P021 101 aa6.14□□□□□ -1.43
RCN1-202ENST00000506388 KRTAP3-2Q9BYR7 98 aa6.14□□□□□ -1.43
RCN1-202ENST00000506388 KRTAP9-3Q9BYQ3 159 aa6.12□□□□□ -1.43
RCN1-202ENST00000506388 P0C880 135 aa6.07□□□□□ -1.44
RCN1-202ENST00000506388 SPRR2GQ9BYE4 73 aa6.06□□□□□ -1.44
RCN1-202ENST00000506388 K7ERS5 55 aa6.04□□□□□ -1.44
RCN1-202ENST00000506388 KRTAP19-1Q8IUB9 90 aa6.02□□□□□ -1.45
RCN1-202ENST00000506388 KRTAP9-2Q9BYQ4 174 aa6□□□□□ -1.45
RCN1-202ENST00000506388 M0QZ58 72 aa5.98□□□□□ -1.45
RCN1-202ENST00000506388 KRTAP13-4Q3LI77 160 aa5.97□□□□□ -1.45
RCN1-202ENST00000506388 R4GN34 69 aa5.97□□□□□ -1.45
RCN1-202ENST00000506388 LCE2BO14633 110 aa5.96□□□□□ -1.46
RCN1-202ENST00000506388 KRTAP19-8Q3LI54 63 aa5.94□□□□□ -1.46
RCN1-202ENST00000506388 PRAC1Q96KF2 57 aa5.93□□□□□ -1.46
RCN1-202ENST00000506388 USH2AO75445 5202 aa5.85□□□□□ -1.47
RCN1-202ENST00000506388 A0A0D9SG42 100 aa5.85□□□□□ -1.47
RCN1-202ENST00000506388 ROMO1P60602 79 aa5.85□□□□□ -1.47
RCN1-202ENST00000506388 MT1BP07438 61 aa5.83□□□□□ -1.48
RCN1-202ENST00000506388 FSIP2Q5CZC0 6907 aa5.81□□□□□ -1.48
RCN1-202ENST00000506388 KRTAP12-1P59990 96 aa5.8□□□□□ -1.48
RCN1-202ENST00000506388 KRTAP25-1Q3LHN0 102 aa5.8□□□□□ -1.48
RCN1-202ENST00000506388 LINC01554Q52M75 96 aa5.79□□□□□ -1.48
RCN1-202ENST00000506388 KRTAP12-2P59991 146 aa5.77□□□□□ -1.49
RCN1-202ENST00000506388 KRTAP9-6A0A140TA67 174 aa5.74□□□□□ -1.49
RCN1-202ENST00000506388 PLAC4Q8WY50 150 aa5.73□□□□□ -1.49
RCN1-202ENST00000506388 KRTAP19-6Q3LI70 58 aa5.72□□□□□ -1.49
RCN1-202ENST00000506388 CRCT1Q9UGL9 99 aa5.72□□□□□ -1.49
RCN1-202ENST00000506388 SPINT4Q6UDR6 99 aa5.7□□□□□ -1.5
RCN1-202ENST00000506388 SSPOA2VEC9 5147 aa5.7□□□□□ -1.5
RCN1-202ENST00000506388 KRTAP10-5P60370 271 aa5.63□□□□□ -1.51
RCN1-202ENST00000506388 PRO2289Q9P1D8 64 aa5.59□□□□□ -1.52
RCN1-202ENST00000506388 MT1XP80297 61 aa5.58□□□□□ -1.52
RCN1-202ENST00000506388 CAMK2N1Q7Z7J9 78 aa5.53□□□□□ -1.52
RCN1-202ENST00000506388 FCGBPQ9Y6R7 5405 aaPredicted RBP5.53□□□□□ -1.52
RCN1-202ENST00000506388 C10orf95Q9H7T3 257 aa5.47□□□□□ -1.53
RCN1-202ENST00000506388 MACF1Q9UPN3 7388 aaKnown RBP5.36□□□□□ -1.55
RCN1-202ENST00000506388 PP632Q6XCG6 107 aa5.36□□□□□ -1.55
RCN1-202ENST00000506388 KRTAP10-12P60413 245 aa5.34□□□□□ -1.55
RCN1-202ENST00000506388 KRTAP23-1A1A580 65 aa5.32□□□□□ -1.56
RCN1-202ENST00000506388 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.3□□□□□ -1.56
RCN1-202ENST00000506388 KRTAP10-7P60409 375 aaPredicted RBP5.3□□□□□ -1.56
RCN1-202ENST00000506388 TNP1P09430 55 aa5.26□□□□□ -1.57
RCN1-202ENST00000506388 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
RCN1-202ENST00000506388 SYNE2Q8WXH0 6885 aaKnown RBP5.23□□□□□ -1.57
RCN1-202ENST00000506388 KRTAP9-7A8MTY7 169 aa5.18□□□□□ -1.58
RCN1-202ENST00000506388 KRTAP4-8A0A0G2JLE6 195 aa5.16□□□□□ -1.58
RCN1-202ENST00000506388 KRTAP4-8Q9BYQ9 185 aa5.16□□□□□ -1.58
RCN1-202ENST00000506388 KMT2DO14686 5537 aa5.15□□□□□ -1.58
RCN1-202ENST00000506388 KRTAP6-3Q3LI67 103 aa5.14□□□□□ -1.59
RCN1-202ENST00000506388 KRTAP5-9P26371 169 aa5.12□□□□□ -1.59
RCN1-202ENST00000506388 KRTAP8-1Q8IUC2 63 aa5.12□□□□□ -1.59
RCN1-202ENST00000506388 LCE3AQ5TA76 89 aa5.05□□□□□ -1.6
RCN1-202ENST00000506388 KRTAP19-7Q3SYF9 63 aa4.99□□□□□ -1.61
RCN1-202ENST00000506388 SPRR2FQ96RM1 72 aa4.99□□□□□ -1.61
RCN1-202ENST00000506388 KRTAP19-5Q3LI72 72 aa4.94□□□□□ -1.62
RCN1-202ENST00000506388 NDUFAF8A1L188 74 aa4.92□□□□□ -1.62
RCN1-202ENST00000506388 MT1EP04732 61 aa4.92□□□□□ -1.62
RCN1-202ENST00000506388 SPRR5A0A1B0GTR4 108 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms