RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 SNURFQ9Y675 71 aa5.71□□□□□ -1.5
KDM3B-203ENST00000505756 KRTAP9-6A0A140TA67 174 aa5.69□□□□□ -1.5
KDM3B-203ENST00000505756 H7BZZ5 65 aa5.68□□□□□ -1.5
KDM3B-203ENST00000505756 CYSTM1Q9H1C7 97 aa5.68□□□□□ -1.5
KDM3B-203ENST00000505756 SPANXA2-OT1Q8N9U9 137 aa5.66□□□□□ -1.5
KDM3B-203ENST00000505756 KRTAP9-8Q9BYQ0 159 aa5.63□□□□□ -1.51
KDM3B-203ENST00000505756 CRCT1Q9UGL9 99 aa5.61□□□□□ -1.51
KDM3B-203ENST00000505756 TMEM258P61165 79 aa5.6□□□□□ -1.51
KDM3B-203ENST00000505756 A8MUN3 132 aa5.59□□□□□ -1.51
KDM3B-203ENST00000505756 ATP5EP56381 51 aaPredicted RBP5.59□□□□□ -1.51
KDM3B-203ENST00000505756 DMAC1Q96GE9 116 aa5.59□□□□□ -1.51
KDM3B-203ENST00000505756 C4orf26Q17RF5 130 aa5.57□□□□□ -1.52
KDM3B-203ENST00000505756 MT2AP02795 61 aa5.56□□□□□ -1.52
KDM3B-203ENST00000505756 KRTAP3-1Q9BYR8 98 aa5.56□□□□□ -1.52
KDM3B-203ENST00000505756 USH2AO75445 5202 aa5.52□□□□□ -1.53
KDM3B-203ENST00000505756 MT1FP04733 61 aa5.52□□□□□ -1.53
KDM3B-203ENST00000505756 H1FX-AS1Q4G0G2 97 aa5.52□□□□□ -1.53
KDM3B-203ENST00000505756 LOC100996750A0A140TA64 210 aa5.51□□□□□ -1.53
KDM3B-203ENST00000505756 KRTAP4-6Q9BYQ5 205 aa5.51□□□□□ -1.53
KDM3B-203ENST00000505756 KRTAP10-10P60014 251 aa5.5□□□□□ -1.53
KDM3B-203ENST00000505756 ACYP2P14621 99 aa5.48□□□□□ -1.53
KDM3B-203ENST00000505756 KRTAP9-3Q9BYQ3 159 aa5.45□□□□□ -1.54
KDM3B-203ENST00000505756 SSPOA2VEC9 5147 aa5.44□□□□□ -1.54
KDM3B-203ENST00000505756 COA5Q86WW8 74 aa5.42□□□□□ -1.54
KDM3B-203ENST00000505756 SERP1Q9Y6X1 66 aa5.4□□□□□ -1.54
KDM3B-203ENST00000505756 S4R3F8 94 aa5.4□□□□□ -1.54
KDM3B-203ENST00000505756 LCA10Q71F78 164 aa5.38□□□□□ -1.55
KDM3B-203ENST00000505756 RPS28P62857 69 aaKnown RBP5.36□□□□□ -1.55
KDM3B-203ENST00000505756 CHKB-CPT1BH3BT56 60 aa5.34□□□□□ -1.55
KDM3B-203ENST00000505756 KRTAP23-1A1A580 65 aa5.33□□□□□ -1.56
KDM3B-203ENST00000505756 SPTSSBQ8NFR3 76 aa5.33□□□□□ -1.56
KDM3B-203ENST00000505756 CSAG1Q6PB30 78 aa5.3□□□□□ -1.56
KDM3B-203ENST00000505756 FCGBPQ9Y6R7 5405 aaPredicted RBP5.3□□□□□ -1.56
KDM3B-203ENST00000505756 KRTAP19-1Q8IUB9 90 aa5.29□□□□□ -1.56
KDM3B-203ENST00000505756 H0YAA0 97 aa5.27□□□□□ -1.57
KDM3B-203ENST00000505756 SMIM26A0A096LP01 95 aa5.23□□□□□ -1.57
KDM3B-203ENST00000505756 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.22□□□□□ -1.57
KDM3B-203ENST00000505756 KRTAP19-6Q3LI70 58 aa5.22□□□□□ -1.57
KDM3B-203ENST00000505756 A0A0A0MQY5 61 aa5.21□□□□□ -1.58
KDM3B-203ENST00000505756 LINC01558Q9Y6Z2 57 aa5.2□□□□□ -1.58
KDM3B-203ENST00000505756 Q1T7F1 81 aa5.19□□□□□ -1.58
KDM3B-203ENST00000505756 V9GYY9 64 aa5.18□□□□□ -1.58
KDM3B-203ENST00000505756 MACF1Q9UPN3 7388 aaKnown RBP5.16□□□□□ -1.58
KDM3B-203ENST00000505756 SPRR2GQ9BYE4 73 aa5.15□□□□□ -1.59
KDM3B-203ENST00000505756 KRTAP9-7A8MTY7 169 aa5.13□□□□□ -1.59
KDM3B-203ENST00000505756 SYNE2Q8WXH0 6885 aaKnown RBP5.13□□□□□ -1.59
KDM3B-203ENST00000505756 ADM2Q7Z4H4 148 aa5.11□□□□□ -1.59
KDM3B-203ENST00000505756 CRIPTQ9P021 101 aa5.11□□□□□ -1.59
KDM3B-203ENST00000505756 A0A1B0GU69 56 aa5.1□□□□□ -1.59
KDM3B-203ENST00000505756 SEC61GP60059 68 aa5.1□□□□□ -1.59
KDM3B-203ENST00000505756 KRTAP19-8Q3LI54 63 aa5.1□□□□□ -1.59
KDM3B-203ENST00000505756 Q5VV11 94 aa5.1□□□□□ -1.59
KDM3B-203ENST00000505756 PRR15LQ9BU68 103 aa5.1□□□□□ -1.59
KDM3B-203ENST00000505756 MT1BP07438 61 aa5.08□□□□□ -1.6
KDM3B-203ENST00000505756 P0C880 135 aa5.08□□□□□ -1.6
KDM3B-203ENST00000505756 A6NN06 94 aa5.01□□□□□ -1.61
KDM3B-203ENST00000505756 M0QZ58 72 aa5.01□□□□□ -1.61
KDM3B-203ENST00000505756 A0A1B0GU33 70 aa5□□□□□ -1.61
KDM3B-203ENST00000505756 PSPHP1O15172 72 aa5□□□□□ -1.61
KDM3B-203ENST00000505756 KRTAP10-5P60370 271 aa4.96□□□□□ -1.62
KDM3B-203ENST00000505756 R4GN34 69 aa4.96□□□□□ -1.62
KDM3B-203ENST00000505756 UQCR11O14957 56 aa4.95□□□□□ -1.62
KDM3B-203ENST00000505756 KRTAP13-4Q3LI77 160 aa4.95□□□□□ -1.62
KDM3B-203ENST00000505756 KRTAP6-3Q3LI67 103 aa4.91□□□□□ -1.62
KDM3B-203ENST00000505756 KRTAP19-4Q3LI73 84 aa4.9□□□□□ -1.63
KDM3B-203ENST00000505756 SPATA8Q6RVD6 105 aa4.89□□□□□ -1.63
KDM3B-203ENST00000505756 A6NED7 52 aa4.87□□□□□ -1.63
KDM3B-203ENST00000505756 MIR22HGQ0VDD5 57 aa4.86□□□□□ -1.63
KDM3B-203ENST00000505756 PLAC4Q8WY50 150 aa4.85□□□□□ -1.63
KDM3B-203ENST00000505756 CDC42SE1Q9NRR8 79 aa4.83□□□□□ -1.64
KDM3B-203ENST00000505756 PRO2289Q9P1D8 64 aa4.83□□□□□ -1.64
KDM3B-203ENST00000505756 A8MU10 97 aa4.79□□□□□ -1.64
KDM3B-203ENST00000505756 MT1XP80297 61 aa4.79□□□□□ -1.64
KDM3B-203ENST00000505756 NEBP20929 6669 aa4.79□□□□□ -1.64
KDM3B-203ENST00000505756 MUC12Q9UKN1 5478 aa4.78□□□□□ -1.64
KDM3B-203ENST00000505756 LINC01554Q52M75 96 aa4.78□□□□□ -1.64
KDM3B-203ENST00000505756 KRTAP12-1P59990 96 aa4.77□□□□□ -1.65
KDM3B-203ENST00000505756 A0A0D9SG42 100 aa4.76□□□□□ -1.65
KDM3B-203ENST00000505756 KRTAP12-2P59991 146 aa4.73□□□□□ -1.65
KDM3B-203ENST00000505756 KRTAP5-9P26371 169 aa4.72□□□□□ -1.65
KDM3B-203ENST00000505756 KMT2DO14686 5537 aa4.71□□□□□ -1.66
KDM3B-203ENST00000505756 BRK1Q8WUW1 75 aa4.7□□□□□ -1.66
KDM3B-203ENST00000505756 KRTAP4-8Q9BYQ9 185 aa4.7□□□□□ -1.66
KDM3B-203ENST00000505756 MDN1Q9NU22 5596 aa4.69□□□□□ -1.66
KDM3B-203ENST00000505756 K7ERS5 55 aa4.67□□□□□ -1.66
KDM3B-203ENST00000505756 SPINT4Q6UDR6 99 aa4.66□□□□□ -1.66
KDM3B-203ENST00000505756 KRTAP8-1Q8IUC2 63 aa4.61□□□□□ -1.67
KDM3B-203ENST00000505756 PRO0628Q9UI54 55 aa4.6□□□□□ -1.67
KDM3B-203ENST00000505756 CAMK2N1Q7Z7J9 78 aa4.59□□□□□ -1.67
KDM3B-203ENST00000505756 SPRR2FQ96RM1 72 aa4.59□□□□□ -1.67
KDM3B-203ENST00000505756 KRTAP10-7P60409 375 aaPredicted RBP4.57□□□□□ -1.68
KDM3B-203ENST00000505756 KRTAP10-12P60413 245 aa4.56□□□□□ -1.68
KDM3B-203ENST00000505756 KRTAP4-8A0A0G2JLE6 195 aa4.55□□□□□ -1.68
KDM3B-203ENST00000505756 SPRR2EP22531 72 aa4.51□□□□□ -1.69
KDM3B-203ENST00000505756 SPRR2BP35325 72 aa4.51□□□□□ -1.69
KDM3B-203ENST00000505756 SPRR2AP35326 72 aa4.51□□□□□ -1.69
KDM3B-203ENST00000505756 KRTAP20-1Q3LI63 56 aa4.51□□□□□ -1.69
KDM3B-203ENST00000505756 C10orf95Q9H7T3 257 aa4.51□□□□□ -1.69
KDM3B-203ENST00000505756 KRTAP15-1Q3LI76 137 aa4.49□□□□□ -1.69
KDM3B-203ENST00000505756 ROMO1P60602 79 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms