RNA–Protein interactions for RNA: ENST00000505612.1

ITGA3-206, Transcript of integrin subunit alpha 3, humanhuman

TSL 4

Gene ITGA3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-206ENST00000505612 KRTAP3-1Q9BYR8 98 aa6.87□□□□□ -1.31
ITGA3-206ENST00000505612 LCE2CQ5TA81 110 aa6.84□□□□□ -1.31
ITGA3-206ENST00000505612 MPLKIPQ8TAP9 179 aa6.84□□□□□ -1.31
ITGA3-206ENST00000505612 KRTAP19-2Q3LHN2 52 aa6.83□□□□□ -1.32
ITGA3-206ENST00000505612 SPTSSBQ8NFR3 76 aa6.83□□□□□ -1.32
ITGA3-206ENST00000505612 LINC01558Q9Y6Z2 57 aa6.82□□□□□ -1.32
ITGA3-206ENST00000505612 RBM12B-AS1Q9P1G2 102 aa6.78□□□□□ -1.32
ITGA3-206ENST00000505612 M0R2T5 61 aa6.76□□□□□ -1.33
ITGA3-206ENST00000505612 MT1HP80294 61 aa6.76□□□□□ -1.33
ITGA3-206ENST00000505612 H1FX-AS1Q4G0G2 97 aa6.74□□□□□ -1.33
ITGA3-206ENST00000505612 FLGP20930 4061 aaPredicted RBP6.7□□□□□ -1.34
ITGA3-206ENST00000505612 PRR15LQ9BU68 103 aa6.69□□□□□ -1.34
ITGA3-206ENST00000505612 Q5VV11 94 aa6.67□□□□□ -1.34
ITGA3-206ENST00000505612 S4R3F8 94 aa6.67□□□□□ -1.34
ITGA3-206ENST00000505612 PSPHP1O15172 72 aa6.66□□□□□ -1.34
ITGA3-206ENST00000505612 A0A1B0GU69 56 aa6.64□□□□□ -1.35
ITGA3-206ENST00000505612 KRTAP3-3Q9BYR6 98 aa6.64□□□□□ -1.35
ITGA3-206ENST00000505612 KRTAP10-6P60371 365 aaPredicted RBP6.63□□□□□ -1.35
ITGA3-206ENST00000505612 LCA10Q71F78 164 aa6.63□□□□□ -1.35
ITGA3-206ENST00000505612 KRTAP9-2Q9BYQ4 174 aa6.62□□□□□ -1.35
ITGA3-206ENST00000505612 LORP23490 312 aaPredicted RBP6.61□□□□□ -1.35
ITGA3-206ENST00000505612 SEC61GP60059 68 aa6.61□□□□□ -1.35
ITGA3-206ENST00000505612 LCE2DQ5TA82 110 aaPredicted RBP6.59□□□□□ -1.35
ITGA3-206ENST00000505612 CSAG1Q6PB30 78 aa6.55□□□□□ -1.36
ITGA3-206ENST00000505612 A6NED7 52 aa6.5□□□□□ -1.37
ITGA3-206ENST00000505612 UQCR11O14957 56 aa6.49□□□□□ -1.37
ITGA3-206ENST00000505612 H0YAA0 97 aa6.48□□□□□ -1.37
ITGA3-206ENST00000505612 BRK1Q8WUW1 75 aa6.46□□□□□ -1.38
ITGA3-206ENST00000505612 CDC42SE1Q9NRR8 79 aa6.46□□□□□ -1.38
ITGA3-206ENST00000505612 SPATA8Q6RVD6 105 aa6.44□□□□□ -1.38
ITGA3-206ENST00000505612 PRO0628Q9UI54 55 aa6.44□□□□□ -1.38
ITGA3-206ENST00000505612 A0A1B0GU33 70 aa6.43□□□□□ -1.38
ITGA3-206ENST00000505612 KRTAP9-8Q9BYQ0 159 aa6.43□□□□□ -1.38
ITGA3-206ENST00000505612 KRTAP3-2Q9BYR7 98 aa6.43□□□□□ -1.38
ITGA3-206ENST00000505612 FSIP2Q5CZC0 6907 aa6.41□□□□□ -1.38
ITGA3-206ENST00000505612 MIR22HGQ0VDD5 57 aa6.39□□□□□ -1.39
ITGA3-206ENST00000505612 KRTAP9-6A0A140TA67 174 aa6.37□□□□□ -1.39
ITGA3-206ENST00000505612 KRTAP10-10P60014 251 aa6.36□□□□□ -1.39
ITGA3-206ENST00000505612 MT2AP02795 61 aa6.35□□□□□ -1.39
ITGA3-206ENST00000505612 ADM2Q7Z4H4 148 aa6.35□□□□□ -1.39
ITGA3-206ENST00000505612 CRCT1Q9UGL9 99 aa6.33□□□□□ -1.4
ITGA3-206ENST00000505612 P0C880 135 aa6.31□□□□□ -1.4
ITGA3-206ENST00000505612 A8MU10 97 aa6.28□□□□□ -1.4
ITGA3-206ENST00000505612 M0QZ58 72 aa6.28□□□□□ -1.4
ITGA3-206ENST00000505612 MT1FP04733 61 aa6.28□□□□□ -1.4
ITGA3-206ENST00000505612 KRTAP9-3Q9BYQ3 159 aa6.23□□□□□ -1.41
ITGA3-206ENST00000505612 USH2AO75445 5202 aa6.22□□□□□ -1.41
ITGA3-206ENST00000505612 KRTAP13-4Q3LI77 160 aa6.2□□□□□ -1.42
ITGA3-206ENST00000505612 CRIPTQ9P021 101 aa6.19□□□□□ -1.42
ITGA3-206ENST00000505612 PMAIP1Q13794 54 aa6.14□□□□□ -1.43
ITGA3-206ENST00000505612 R4GN34 69 aa6.14□□□□□ -1.43
ITGA3-206ENST00000505612 A6NN06 94 aa6.13□□□□□ -1.43
ITGA3-206ENST00000505612 K7ERS5 55 aa6.13□□□□□ -1.43
ITGA3-206ENST00000505612 LCE2BO14633 110 aa6.12□□□□□ -1.43
ITGA3-206ENST00000505612 SSPOA2VEC9 5147 aa6.1□□□□□ -1.43
ITGA3-206ENST00000505612 SVIPQ8NHG7 77 aa6.09□□□□□ -1.43
ITGA3-206ENST00000505612 A0A0D9SG42 100 aa6.05□□□□□ -1.44
ITGA3-206ENST00000505612 KRTAP12-1P59990 96 aa6.02□□□□□ -1.45
ITGA3-206ENST00000505612 KRTAP19-1Q8IUB9 90 aa5.98□□□□□ -1.45
ITGA3-206ENST00000505612 SPRR2GQ9BYE4 73 aa5.98□□□□□ -1.45
ITGA3-206ENST00000505612 KRTAP12-2P59991 146 aa5.97□□□□□ -1.45
ITGA3-206ENST00000505612 FCGBPQ9Y6R7 5405 aaPredicted RBP5.97□□□□□ -1.45
ITGA3-206ENST00000505612 KRTAP19-6Q3LI70 58 aa5.95□□□□□ -1.46
ITGA3-206ENST00000505612 LINC01554Q52M75 96 aa5.94□□□□□ -1.46
ITGA3-206ENST00000505612 SPINT4Q6UDR6 99 aa5.94□□□□□ -1.46
ITGA3-206ENST00000505612 KTN1-AS1Q86SY8 53 aa5.94□□□□□ -1.46
ITGA3-206ENST00000505612 KRTAP19-8Q3LI54 63 aa5.89□□□□□ -1.47
ITGA3-206ENST00000505612 ROMO1P60602 79 aa5.86□□□□□ -1.47
ITGA3-206ENST00000505612 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.84□□□□□ -1.47
ITGA3-206ENST00000505612 MT1BP07438 61 aa5.81□□□□□ -1.48
ITGA3-206ENST00000505612 PLAC4Q8WY50 150 aa5.77□□□□□ -1.49
ITGA3-206ENST00000505612 MACF1Q9UPN3 7388 aaKnown RBP5.77□□□□□ -1.49
ITGA3-206ENST00000505612 CAMK2N1Q7Z7J9 78 aa5.75□□□□□ -1.49
ITGA3-206ENST00000505612 KRTAP9-7A8MTY7 169 aa5.74□□□□□ -1.49
ITGA3-206ENST00000505612 KRTAP10-5P60370 271 aa5.7□□□□□ -1.5
ITGA3-206ENST00000505612 SYNE2Q8WXH0 6885 aaKnown RBP5.69□□□□□ -1.5
ITGA3-206ENST00000505612 C10orf95Q9H7T3 257 aa5.68□□□□□ -1.5
ITGA3-206ENST00000505612 PRAC1Q96KF2 57 aa5.67□□□□□ -1.5
ITGA3-206ENST00000505612 PRO2289Q9P1D8 64 aa5.67□□□□□ -1.5
ITGA3-206ENST00000505612 KRTAP25-1Q3LHN0 102 aa5.63□□□□□ -1.51
ITGA3-206ENST00000505612 KRTAP6-3Q3LI67 103 aa5.58□□□□□ -1.52
ITGA3-206ENST00000505612 TNP1P09430 55 aa5.54□□□□□ -1.52
ITGA3-206ENST00000505612 KRTAP23-1A1A580 65 aa5.52□□□□□ -1.53
ITGA3-206ENST00000505612 MT1XP80297 61 aa5.5□□□□□ -1.53
ITGA3-206ENST00000505612 PP632Q6XCG6 107 aa5.49□□□□□ -1.53
ITGA3-206ENST00000505612 KRTAP5-9P26371 169 aa5.36□□□□□ -1.55
ITGA3-206ENST00000505612 NEBP20929 6669 aa5.36□□□□□ -1.55
ITGA3-206ENST00000505612 MUC12Q9UKN1 5478 aa5.35□□□□□ -1.55
ITGA3-206ENST00000505612 KMT2DO14686 5537 aa5.34□□□□□ -1.55
ITGA3-206ENST00000505612 KRTAP8-1Q8IUC2 63 aa5.3□□□□□ -1.56
ITGA3-206ENST00000505612 MDN1Q9NU22 5596 aa5.29□□□□□ -1.56
ITGA3-206ENST00000505612 KRTAP10-12P60413 245 aa5.26□□□□□ -1.57
ITGA3-206ENST00000505612 KRTAP10-7P60409 375 aaPredicted RBP5.24□□□□□ -1.57
ITGA3-206ENST00000505612 SPRR2FQ96RM1 72 aa5.24□□□□□ -1.57
ITGA3-206ENST00000505612 LCE3AQ5TA76 89 aa5.22□□□□□ -1.57
ITGA3-206ENST00000505612 KRTAP4-8A0A0G2JLE6 195 aa5.17□□□□□ -1.58
ITGA3-206ENST00000505612 KRTAP4-8Q9BYQ9 185 aa5.17□□□□□ -1.58
ITGA3-206ENST00000505612 SPRR2EP22531 72 aa5.12□□□□□ -1.59
ITGA3-206ENST00000505612 SPRR2BP35325 72 aa5.12□□□□□ -1.59
ITGA3-206ENST00000505612 SPRR2AP35326 72 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms