RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-253ENST00000504651 KRTAP3-3Q9BYR6 98 aa6.64□□□□□ -1.35
DDR1-253ENST00000504651 NDUFC1O43677 76 aa6.63□□□□□ -1.35
DDR1-253ENST00000504651 MT2AP02795 61 aa6.63□□□□□ -1.35
DDR1-253ENST00000504651 ACYP2P14621 99 aa6.63□□□□□ -1.35
DDR1-253ENST00000504651 CYSTM1Q9H1C7 97 aa6.62□□□□□ -1.35
DDR1-253ENST00000504651 CCDC179H3BU77 68 aa6.61□□□□□ -1.35
DDR1-253ENST00000504651 H7BZZ5 65 aa6.6□□□□□ -1.35
DDR1-253ENST00000504651 MT1FP04733 61 aa6.58□□□□□ -1.36
DDR1-253ENST00000504651 KRTAP10-10P60014 251 aa6.56□□□□□ -1.36
DDR1-253ENST00000504651 CHKB-CPT1BH3BT56 60 aa6.55□□□□□ -1.36
DDR1-253ENST00000504651 LCE2DQ5TA82 110 aaPredicted RBP6.51□□□□□ -1.37
DDR1-253ENST00000504651 SPTSSBQ8NFR3 76 aa6.5□□□□□ -1.37
DDR1-253ENST00000504651 KRTAP9-2Q9BYQ4 174 aa6.49□□□□□ -1.37
DDR1-253ENST00000504651 COA5Q86WW8 74 aa6.47□□□□□ -1.37
DDR1-253ENST00000504651 H0YAA0 97 aa6.45□□□□□ -1.38
DDR1-253ENST00000504651 ATP5EP56381 51 aaPredicted RBP6.43□□□□□ -1.38
DDR1-253ENST00000504651 KRTAP9-3Q9BYQ3 159 aa6.43□□□□□ -1.38
DDR1-253ENST00000504651 ADM2Q7Z4H4 148 aa6.42□□□□□ -1.38
DDR1-253ENST00000504651 TMEM258P61165 79 aa6.4□□□□□ -1.38
DDR1-253ENST00000504651 LCE2BO14633 110 aa6.33□□□□□ -1.4
DDR1-253ENST00000504651 CRIPTQ9P021 101 aa6.33□□□□□ -1.4
DDR1-253ENST00000504651 P0C880 135 aa6.31□□□□□ -1.4
DDR1-253ENST00000504651 PCP4P48539 62 aa6.31□□□□□ -1.4
DDR1-253ENST00000504651 KRTAP19-1Q8IUB9 90 aa6.29□□□□□ -1.4
DDR1-253ENST00000504651 KRTAP3-2Q9BYR7 98 aa6.29□□□□□ -1.4
DDR1-253ENST00000504651 SPRR2GQ9BYE4 73 aa6.28□□□□□ -1.4
DDR1-253ENST00000504651 R4GN34 69 aa6.23□□□□□ -1.41
DDR1-253ENST00000504651 SEC61GP60059 68 aa6.22□□□□□ -1.41
DDR1-253ENST00000504651 M0QZ58 72 aa6.21□□□□□ -1.42
DDR1-253ENST00000504651 CRCT1Q9UGL9 99 aa6.19□□□□□ -1.42
DDR1-253ENST00000504651 SERP1Q9Y6X1 66 aa6.19□□□□□ -1.42
DDR1-253ENST00000504651 USH2AO75445 5202 aa6.19□□□□□ -1.42
DDR1-253ENST00000504651 KRTAP19-8Q3LI54 63 aa6.18□□□□□ -1.42
DDR1-253ENST00000504651 Q5VV11 94 aa6.18□□□□□ -1.42
DDR1-253ENST00000504651 KRTAP9-6A0A140TA67 174 aa6.15□□□□□ -1.42
DDR1-253ENST00000504651 A0A1B0GU69 56 aa6.14□□□□□ -1.43
DDR1-253ENST00000504651 MT1BP07438 61 aa6.14□□□□□ -1.43
DDR1-253ENST00000504651 FSIP2Q5CZC0 6907 aa6.13□□□□□ -1.43
DDR1-253ENST00000504651 LINC01554Q52M75 96 aa6.1□□□□□ -1.43
DDR1-253ENST00000504651 PRR15LQ9BU68 103 aa6.07□□□□□ -1.44
DDR1-253ENST00000504651 LINC01558Q9Y6Z2 57 aa6.07□□□□□ -1.44
DDR1-253ENST00000504651 SSPOA2VEC9 5147 aa6.05□□□□□ -1.44
DDR1-253ENST00000504651 A0A1B0GU33 70 aa6.05□□□□□ -1.44
DDR1-253ENST00000504651 KRTAP19-6Q3LI70 58 aa6.05□□□□□ -1.44
DDR1-253ENST00000504651 KRTAP13-4Q3LI77 160 aa6.05□□□□□ -1.44
DDR1-253ENST00000504651 PLAC4Q8WY50 150 aa6.01□□□□□ -1.45
DDR1-253ENST00000504651 SPATA8Q6RVD6 105 aa5.99□□□□□ -1.45
DDR1-253ENST00000504651 V9GYY9 64 aa5.97□□□□□ -1.45
DDR1-253ENST00000504651 SMIM26A0A096LP01 95 aa5.96□□□□□ -1.46
DDR1-253ENST00000504651 RPS28P62857 69 aaKnown RBP5.95□□□□□ -1.46
DDR1-253ENST00000504651 A6NN06 94 aa5.94□□□□□ -1.46
DDR1-253ENST00000504651 A0A0D9SG42 100 aa5.93□□□□□ -1.46
DDR1-253ENST00000504651 Q1T7F1 81 aa5.93□□□□□ -1.46
DDR1-253ENST00000504651 KRTAP10-5P60370 271 aa5.92□□□□□ -1.46
DDR1-253ENST00000504651 PSPHP1O15172 72 aa5.88□□□□□ -1.47
DDR1-253ENST00000504651 PRO2289Q9P1D8 64 aa5.87□□□□□ -1.47
DDR1-253ENST00000504651 FCGBPQ9Y6R7 5405 aaPredicted RBP5.87□□□□□ -1.47
DDR1-253ENST00000504651 UQCR11O14957 56 aa5.86□□□□□ -1.47
DDR1-253ENST00000504651 A8MU10 97 aa5.84□□□□□ -1.47
DDR1-253ENST00000504651 MT1XP80297 61 aa5.84□□□□□ -1.47
DDR1-253ENST00000504651 SPINT4Q6UDR6 99 aa5.83□□□□□ -1.48
DDR1-253ENST00000504651 KRTAP12-1P59990 96 aa5.8□□□□□ -1.48
DDR1-253ENST00000504651 CAMK2N1Q7Z7J9 78 aa5.8□□□□□ -1.48
DDR1-253ENST00000504651 KRTAP12-2P59991 146 aa5.77□□□□□ -1.49
DDR1-253ENST00000504651 MIR22HGQ0VDD5 57 aa5.77□□□□□ -1.49
DDR1-253ENST00000504651 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.76□□□□□ -1.49
DDR1-253ENST00000504651 A6NED7 52 aa5.72□□□□□ -1.49
DDR1-253ENST00000504651 MACF1Q9UPN3 7388 aaKnown RBP5.64□□□□□ -1.51
DDR1-253ENST00000504651 K7ERS5 55 aa5.6□□□□□ -1.51
DDR1-253ENST00000504651 KRTAP10-7P60409 375 aaPredicted RBP5.59□□□□□ -1.51
DDR1-253ENST00000504651 KRTAP9-7A8MTY7 169 aa5.58□□□□□ -1.52
DDR1-253ENST00000504651 KRTAP10-12P60413 245 aa5.54□□□□□ -1.52
DDR1-253ENST00000504651 CDC42SE1Q9NRR8 79 aa5.54□□□□□ -1.52
DDR1-253ENST00000504651 C10orf95Q9H7T3 257 aa5.5□□□□□ -1.53
DDR1-253ENST00000504651 KRTAP6-3Q3LI67 103 aa5.49□□□□□ -1.53
DDR1-253ENST00000504651 SYNE2Q8WXH0 6885 aaKnown RBP5.47□□□□□ -1.53
DDR1-253ENST00000504651 KRTAP4-8A0A0G2JLE6 195 aa5.46□□□□□ -1.54
DDR1-253ENST00000504651 KRTAP8-1Q8IUC2 63 aa5.46□□□□□ -1.54
DDR1-253ENST00000504651 KRTAP4-8Q9BYQ9 185 aa5.46□□□□□ -1.54
DDR1-253ENST00000504651 TNP1P09430 55 aa5.44□□□□□ -1.54
DDR1-253ENST00000504651 KMT2DO14686 5537 aa5.4□□□□□ -1.54
DDR1-253ENST00000504651 KRTAP5-9P26371 169 aa5.39□□□□□ -1.55
DDR1-253ENST00000504651 SPRR2FQ96RM1 72 aa5.36□□□□□ -1.55
DDR1-253ENST00000504651 BRK1Q8WUW1 75 aa5.35□□□□□ -1.55
DDR1-253ENST00000504651 KRTAP25-1Q3LHN0 102 aa5.31□□□□□ -1.56
DDR1-253ENST00000504651 ROMO1P60602 79 aa5.28□□□□□ -1.56
DDR1-253ENST00000504651 LCE3AQ5TA76 89 aa5.28□□□□□ -1.56
DDR1-253ENST00000504651 KRTAP19-7Q3SYF9 63 aa5.21□□□□□ -1.58
DDR1-253ENST00000504651 SPRR2EP22531 72 aa5.2□□□□□ -1.58
DDR1-253ENST00000504651 SPRR2BP35325 72 aa5.2□□□□□ -1.58
DDR1-253ENST00000504651 SPRR2AP35326 72 aa5.2□□□□□ -1.58
DDR1-253ENST00000504651 KRTAP19-5Q3LI72 72 aa5.19□□□□□ -1.58
DDR1-253ENST00000504651 MUC12Q9UKN1 5478 aa5.18□□□□□ -1.58
DDR1-253ENST00000504651 MT1EP04732 61 aa5.15□□□□□ -1.59
DDR1-253ENST00000504651 LCE1AQ5T7P2 110 aa5.15□□□□□ -1.59
DDR1-253ENST00000504651 NEBP20929 6669 aa5.11□□□□□ -1.59
DDR1-253ENST00000504651 KRTAP23-1A1A580 65 aa5.1□□□□□ -1.59
DDR1-253ENST00000504651 MDN1Q9NU22 5596 aa5.1□□□□□ -1.59
DDR1-253ENST00000504651 KRTAP12-3P60328 96 aa5.07□□□□□ -1.6
DDR1-253ENST00000504651 KRTAP19-3Q7Z4W3 81 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms