RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 FAT2Q9NYQ8 4349 aa5□□□□□ -1.61
CASC9-201ENST00000504531 PSPHP1O15172 72 aa4.99□□□□□ -1.61
CASC9-201ENST00000504531 DNAH5Q8TE73 4624 aa4.97□□□□□ -1.61
CASC9-201ENST00000504531 PRR15LQ9BU68 103 aa4.97□□□□□ -1.61
CASC9-201ENST00000504531 PKD1P98161 4303 aa4.97□□□□□ -1.61
CASC9-201ENST00000504531 HSPG2P98160 4391 aa4.97□□□□□ -1.61
CASC9-201ENST00000504531 HERC1Q15751 4861 aa4.96□□□□□ -1.62
CASC9-201ENST00000504531 CHKB-CPT1BH3BT56 60 aa4.96□□□□□ -1.62
CASC9-201ENST00000504531 ATP11AUNQ6ZP68 121 aa4.96□□□□□ -1.62
CASC9-201ENST00000504531 TYMSOSQ8TAI1 123 aa4.95□□□□□ -1.62
CASC9-201ENST00000504531 CDC42SE1Q9NRR8 79 aa4.94□□□□□ -1.62
CASC9-201ENST00000504531 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.93□□□□□ -1.62
CASC9-201ENST00000504531 Q5VSD8 79 aa4.91□□□□□ -1.62
CASC9-201ENST00000504531 LINC00304Q8N9R0 145 aa4.91□□□□□ -1.62
CASC9-201ENST00000504531 LRP1BQ9NZR2 4599 aa4.9□□□□□ -1.62
CASC9-201ENST00000504531 SMR3BP02814 79 aaPredicted RBP4.9□□□□□ -1.63
CASC9-201ENST00000504531 A6NED7 52 aa4.89□□□□□ -1.63
CASC9-201ENST00000504531 KRTAP10-6P60371 365 aaPredicted RBP4.89□□□□□ -1.63
CASC9-201ENST00000504531 LCA10Q71F78 164 aa4.88□□□□□ -1.63
CASC9-201ENST00000504531 PMAIP1Q13794 54 aa4.87□□□□□ -1.63
CASC9-201ENST00000504531 C7orf65Q6ZTY9 151 aa4.86□□□□□ -1.63
CASC9-201ENST00000504531 APOBP04114 4563 aaKnown RBP4.86□□□□□ -1.63
CASC9-201ENST00000504531 A8MUU9 505 aa4.85□□□□□ -1.63
CASC9-201ENST00000504531 C20orf166-AS1Q96NR2 134 aa4.85□□□□□ -1.63
CASC9-201ENST00000504531 DMBT1Q9UGM3 2413 aaPredicted RBP4.84□□□□□ -1.64
CASC9-201ENST00000504531 KRTAP10-4P60372 401 aaPredicted RBP4.83□□□□□ -1.64
CASC9-201ENST00000504531 VPS13BQ7Z7G8 4022 aa4.82□□□□□ -1.64
CASC9-201ENST00000504531 SPTSSBQ8NFR3 76 aa4.82□□□□□ -1.64
CASC9-201ENST00000504531 KRTAP10-7P60409 375 aaPredicted RBP4.81□□□□□ -1.64
CASC9-201ENST00000504531 SPATA8Q6RVD6 105 aa4.81□□□□□ -1.64
CASC9-201ENST00000504531 A0A1B0GU69 56 aa4.8□□□□□ -1.64
CASC9-201ENST00000504531 A6NN06 94 aa4.8□□□□□ -1.64
CASC9-201ENST00000504531 UBR4Q5T4S7 5183 aa4.8□□□□□ -1.64
CASC9-201ENST00000504531 SPINK7P58062 85 aa4.79□□□□□ -1.64
CASC9-201ENST00000504531 KTN1-AS1Q86SY8 53 aa4.79□□□□□ -1.64
CASC9-201ENST00000504531 UQCR11O14957 56 aa4.77□□□□□ -1.65
CASC9-201ENST00000504531 FAT1Q14517 4588 aa4.76□□□□□ -1.65
CASC9-201ENST00000504531 RETNLBQ9BQ08 111 aa4.76□□□□□ -1.65
CASC9-201ENST00000504531 MYCBP2O75592 4640 aa4.76□□□□□ -1.65
CASC9-201ENST00000504531 PKHD1L1Q86WI1 4243 aa4.75□□□□□ -1.65
CASC9-201ENST00000504531 FLG2Q5D862 2391 aaPredicted RBP4.75□□□□□ -1.65
CASC9-201ENST00000504531 A8MU10 97 aa4.75□□□□□ -1.65
CASC9-201ENST00000504531 SEC61GP60059 68 aa4.73□□□□□ -1.65
CASC9-201ENST00000504531 KRTAP10-8P60410 259 aa4.71□□□□□ -1.66
CASC9-201ENST00000504531 MIR22HGQ0VDD5 57 aa4.71□□□□□ -1.66
CASC9-201ENST00000504531 LCE1EQ5T753 118 aa4.7□□□□□ -1.66
CASC9-201ENST00000504531 COX6B2Q6YFQ2 88 aa4.67□□□□□ -1.66
CASC9-201ENST00000504531 HMCN2Q8NDA2 5059 aa4.65□□□□□ -1.66
CASC9-201ENST00000504531 C9orf92A6NGG3 77 aa4.64□□□□□ -1.67
CASC9-201ENST00000504531 RPL37P61927 97 aaKnown RBP4.61□□□□□ -1.67
CASC9-201ENST00000504531 KRTAP5-11Q6L8G4 156 aa4.59□□□□□ -1.67
CASC9-201ENST00000504531 A0A1B0GU33 70 aa4.58□□□□□ -1.68
CASC9-201ENST00000504531 LRP1Q07954 4544 aaKnown RBP4.58□□□□□ -1.68
CASC9-201ENST00000504531 RNF213Q63HN8 5207 aa4.57□□□□□ -1.68
CASC9-201ENST00000504531 RBM12B-AS1Q9P1G2 102 aa4.57□□□□□ -1.68
CASC9-201ENST00000504531 H1FX-AS1Q4G0G2 97 aa4.56□□□□□ -1.68
CASC9-201ENST00000504531 TNXBP22105 4242 aa4.56□□□□□ -1.68
CASC9-201ENST00000504531 FAT3Q8TDW7 4589 aa4.54□□□□□ -1.68
CASC9-201ENST00000504531 MT1HL1P0DM35 61 aa4.53□□□□□ -1.68
CASC9-201ENST00000504531 H0YAA0 97 aa4.52□□□□□ -1.69
CASC9-201ENST00000504531 NDUFAF8A1L188 74 aa4.49□□□□□ -1.69
CASC9-201ENST00000504531 K7ERS5 55 aa4.49□□□□□ -1.69
CASC9-201ENST00000504531 LRP2P98164 4655 aa4.48□□□□□ -1.69
CASC9-201ENST00000504531 TPRXLQ17RH7 258 aa4.48□□□□□ -1.69
CASC9-201ENST00000504531 LCE1FQ5T754 118 aa4.48□□□□□ -1.69
CASC9-201ENST00000504531 PRAC1Q96KF2 57 aa4.45□□□□□ -1.7
CASC9-201ENST00000504531 S4R3F8 94 aa4.45□□□□□ -1.7
CASC9-201ENST00000504531 KRTAP10-5P60370 271 aa4.44□□□□□ -1.7
CASC9-201ENST00000504531 KRTAP10-12P60413 245 aa4.44□□□□□ -1.7
CASC9-201ENST00000504531 LINC01554Q52M75 96 aa4.4□□□□□ -1.71
CASC9-201ENST00000504531 ADM2Q7Z4H4 148 aa4.38□□□□□ -1.71
CASC9-201ENST00000504531 CSAG1Q6PB30 78 aa4.36□□□□□ -1.71
CASC9-201ENST00000504531 M0QZ58 72 aa4.34□□□□□ -1.71
CASC9-201ENST00000504531 KRTAP25-1Q3LHN0 102 aa4.34□□□□□ -1.71
CASC9-201ENST00000504531 ROMO1P60602 79 aa4.33□□□□□ -1.72
CASC9-201ENST00000504531 LPAP08519 4548 aa4.32□□□□□ -1.72
CASC9-201ENST00000504531 KRTAP5-9P26371 169 aa4.29□□□□□ -1.72
CASC9-201ENST00000504531 KRTAP13-4Q3LI77 160 aa4.28□□□□□ -1.72
CASC9-201ENST00000504531 MUC2Q02817 5179 aa4.27□□□□□ -1.73
CASC9-201ENST00000504531 P0C880 135 aa4.27□□□□□ -1.73
CASC9-201ENST00000504531 KRTAP12-1P59990 96 aa4.21□□□□□ -1.74
CASC9-201ENST00000504531 FAT4Q6V0I7 4981 aa4.2□□□□□ -1.74
CASC9-201ENST00000504531 LCE3CQ5T5A8 94 aa4.2□□□□□ -1.74
CASC9-201ENST00000504531 A0A0D9SG42 100 aa4.19□□□□□ -1.74
CASC9-201ENST00000504531 KRTAP5-1Q6L8H4 278 aa4.18□□□□□ -1.74
CASC9-201ENST00000504531 FSIP2Q5CZC0 6907 aa4.18□□□□□ -1.74
CASC9-201ENST00000504531 KRTAP5-4Q6L8H1 288 aa4.17□□□□□ -1.74
CASC9-201ENST00000504531 KRTAP12-2P59991 146 aa4.16□□□□□ -1.74
CASC9-201ENST00000504531 CRCT1Q9UGL9 99 aa4.16□□□□□ -1.74
CASC9-201ENST00000504531 KRTAP9-6A8MVA2 160 aa4.15□□□□□ -1.75
CASC9-201ENST00000504531 CRIPTQ9P021 101 aa4.15□□□□□ -1.75
CASC9-201ENST00000504531 KRTAP19-2Q3LHN2 52 aa4.11□□□□□ -1.75
CASC9-201ENST00000504531 R4GN34 69 aa4.11□□□□□ -1.75
CASC9-201ENST00000504531 MUC17Q685J3 4493 aa4.11□□□□□ -1.75
CASC9-201ENST00000504531 SPINT4Q6UDR6 99 aa4.1□□□□□ -1.75
CASC9-201ENST00000504531 KRTAP4-4Q9BYR3 166 aa4.08□□□□□ -1.76
CASC9-201ENST00000504531 KRTAP4-1Q9BYQ7 146 aa4.06□□□□□ -1.76
CASC9-201ENST00000504531 PP632Q6XCG6 107 aa3.99□□□□□ -1.77
CASC9-201ENST00000504531 C10orf95Q9H7T3 257 aa3.96□□□□□ -1.78
CASC9-201ENST00000504531 M0R2T5 61 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms