RNA–Protein interactions for RNA: ENST00000504466.1

HMGCR-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 1,107 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-204ENST00000504466 LIMD2Q9BT23 127 aa2.87□□□□□ -1.95
HMGCR-204ENST00000504466 C8orf87E5RJ46 101 aa2.86□□□□□ -1.95
HMGCR-204ENST00000504466 MT1HL1P0DM35 61 aa2.86□□□□□ -1.95
HMGCR-204ENST00000504466 C5orf47Q569G3 176 aa2.86□□□□□ -1.95
HMGCR-204ENST00000504466 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
HMGCR-204ENST00000504466 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
HMGCR-204ENST00000504466 MRPL34Q9BQ48 92 aaKnown RBP2.86□□□□□ -1.95
HMGCR-204ENST00000504466 SNURFQ9Y675 71 aa2.86□□□□□ -1.95
HMGCR-204ENST00000504466 BIRC6Q9NR09 4857 aa2.85□□□□□ -1.95
HMGCR-204ENST00000504466 H7BZZ5 65 aa2.85□□□□□ -1.95
HMGCR-204ENST00000504466 DMBT1Q9UGM3 2413 aaPredicted RBP2.85□□□□□ -1.95
HMGCR-204ENST00000504466 LINC00313P59037 77 aa2.84□□□□□ -1.95
HMGCR-204ENST00000504466 Q5W150 140 aa2.84□□□□□ -1.95
HMGCR-204ENST00000504466 TP53AIP1Q9HCN2 124 aa2.83□□□□□ -1.96
HMGCR-204ENST00000504466 HERC2O95714 4834 aa2.83□□□□□ -1.96
HMGCR-204ENST00000504466 MYCBP2O75592 4640 aa2.83□□□□□ -1.96
HMGCR-204ENST00000504466 H0Y9P7 68 aa2.82□□□□□ -1.96
HMGCR-204ENST00000504466 RETNLBQ9BQ08 111 aa2.82□□□□□ -1.96
HMGCR-204ENST00000504466 TRAV22A0A0B4J277 110 aa2.81□□□□□ -1.96
HMGCR-204ENST00000504466 H3BPC8 53 aa2.81□□□□□ -1.96
HMGCR-204ENST00000504466 TMEM258P61165 79 aa2.81□□□□□ -1.96
HMGCR-204ENST00000504466 LINC00208Q96KT6 92 aa2.81□□□□□ -1.96
HMGCR-204ENST00000504466 ABCA13Q86UQ4 5058 aa2.81□□□□□ -1.96
HMGCR-204ENST00000504466 NDUFC1O43677 76 aa2.8□□□□□ -1.96
HMGCR-204ENST00000504466 NDUFS5O43920 106 aa2.8□□□□□ -1.96
HMGCR-204ENST00000504466 MP68P56378 58 aa2.8□□□□□ -1.96
HMGCR-204ENST00000504466 OXTP01178 125 aa2.79□□□□□ -1.96
HMGCR-204ENST00000504466 C1orf64Q8NEQ6 169 aa2.79□□□□□ -1.96
HMGCR-204ENST00000504466 FAM236DA0A1B0GTK5 79 aa2.78□□□□□ -1.96
HMGCR-204ENST00000504466 C9orf92A6NGG3 77 aa2.78□□□□□ -1.96
HMGCR-204ENST00000504466 A8MUU9 505 aa2.78□□□□□ -1.96
HMGCR-204ENST00000504466 FAM236CP0DP71 79 aa2.78□□□□□ -1.96
HMGCR-204ENST00000504466 C20orf166-AS1Q96NR2 134 aa2.78□□□□□ -1.96
HMGCR-204ENST00000504466 CYP4F30PQ9H0H9 118 aa2.77□□□□□ -1.97
HMGCR-204ENST00000504466 RPS28P62857 69 aaKnown RBP2.76□□□□□ -1.97
HMGCR-204ENST00000504466 FP248Q71RG6 208 aaPredicted RBP2.76□□□□□ -1.97
HMGCR-204ENST00000504466 LOC101927531A0A1B0GV80 90 aa2.75□□□□□ -1.97
HMGCR-204ENST00000504466 PCOTHQ58A44 107 aa2.75□□□□□ -1.97
HMGCR-204ENST00000504466 SPANXA2-OT1Q8N9U9 137 aa2.75□□□□□ -1.97
HMGCR-204ENST00000504466 ATP5EP56381 51 aaPredicted RBP2.74□□□□□ -1.97
HMGCR-204ENST00000504466 SERP1Q9Y6X1 66 aa2.73□□□□□ -1.97
HMGCR-204ENST00000504466 HRES1P13985 223 aa2.72□□□□□ -1.97
HMGCR-204ENST00000504466 SMIM26A0A096LP01 95 aa2.71□□□□□ -1.98
HMGCR-204ENST00000504466 RPL37P61927 97 aaKnown RBP2.71□□□□□ -1.98
HMGCR-204ENST00000504466 LRP2P98164 4655 aa2.7□□□□□ -1.98
HMGCR-204ENST00000504466 LPAP08519 4548 aa2.69□□□□□ -1.98
HMGCR-204ENST00000504466 TPRXLQ17RH7 258 aa2.69□□□□□ -1.98
HMGCR-204ENST00000504466 PCLOQ9Y6V0 5065 aa2.69□□□□□ -1.98
HMGCR-204ENST00000504466 C7orf65Q6ZTY9 151 aa2.68□□□□□ -1.98
HMGCR-204ENST00000504466 DMAC1Q96GE9 116 aa2.68□□□□□ -1.98
HMGCR-204ENST00000504466 SPINK7P58062 85 aa2.67□□□□□ -1.98
HMGCR-204ENST00000504466 COA5Q86WW8 74 aa2.67□□□□□ -1.98
HMGCR-204ENST00000504466 MUC17Q685J3 4493 aa2.66□□□□□ -1.98
HMGCR-204ENST00000504466 ATP11AUNQ6ZP68 121 aa2.66□□□□□ -1.98
HMGCR-204ENST00000504466 C4orf26Q17RF5 130 aa2.65□□□□□ -1.99
HMGCR-204ENST00000504466 ACYP2P14621 99 aa2.64□□□□□ -1.99
HMGCR-204ENST00000504466 HERC1Q15751 4861 aa2.63□□□□□ -1.99
HMGCR-204ENST00000504466 Q1T7F1 81 aa2.62□□□□□ -1.99
HMGCR-204ENST00000504466 COX6B2Q6YFQ2 88 aa2.62□□□□□ -1.99
HMGCR-204ENST00000504466 HMCN2Q8NDA2 5059 aa2.62□□□□□ -1.99
HMGCR-204ENST00000504466 A8MUN3 132 aa2.61□□□□□ -1.99
HMGCR-204ENST00000504466 PSPHP1O15172 72 aa2.61□□□□□ -1.99
HMGCR-204ENST00000504466 KRTAP4-1Q9BYQ7 146 aa2.61□□□□□ -1.99
HMGCR-204ENST00000504466 LINC01558Q9Y6Z2 57 aa2.59□□□□□ -1.99
HMGCR-204ENST00000504466 KRTAP5-8O75690 187 aa2.58□□□□□ -2
HMGCR-204ENST00000504466 KRTAP19-2Q3LHN2 52 aa2.58□□□□□ -2
HMGCR-204ENST00000504466 CHKB-CPT1BH3BT56 60 aa2.56□□□□□ -2
HMGCR-204ENST00000504466 Q5VV11 94 aa2.56□□□□□ -2
HMGCR-204ENST00000504466 V9GYY9 64 aa2.56□□□□□ -2
HMGCR-204ENST00000504466 H1FX-AS1Q4G0G2 97 aa2.54□□□□□ -2
HMGCR-204ENST00000504466 LCA10Q71F78 164 aa2.53□□□□□ -2
HMGCR-204ENST00000504466 PRR15LQ9BU68 103 aa2.53□□□□□ -2
HMGCR-204ENST00000504466 LCE3DQ9BYE3 92 aa2.53□□□□□ -2
HMGCR-204ENST00000504466 LUZP6Q538Z0 58 aa2.52□□□□□ -2.01
HMGCR-204ENST00000504466 RBM12B-AS1Q9P1G2 102 aa2.51□□□□□ -2.01
HMGCR-204ENST00000504466 S4R3F8 94 aa2.51□□□□□ -2.01
HMGCR-204ENST00000504466 FLGP20930 4061 aaPredicted RBP2.5□□□□□ -2.01
HMGCR-204ENST00000504466 PP632Q6XCG6 107 aa2.5□□□□□ -2.01
HMGCR-204ENST00000504466 SPTSSBQ8NFR3 76 aa2.5□□□□□ -2.01
HMGCR-204ENST00000504466 SPRR5A0A1B0GTR4 108 aa2.49□□□□□ -2.01
HMGCR-204ENST00000504466 A0A1B0GU69 56 aa2.49□□□□□ -2.01
HMGCR-204ENST00000504466 RNF213Q63HN8 5207 aa2.48□□□□□ -2.01
HMGCR-204ENST00000504466 PRO0628Q9UI54 55 aa2.48□□□□□ -2.01
HMGCR-204ENST00000504466 MUC2Q02817 5179 aa2.48□□□□□ -2.01
HMGCR-204ENST00000504466 SPINT4Q6UDR6 99 aa2.46□□□□□ -2.02
HMGCR-204ENST00000504466 UBR4Q5T4S7 5183 aa2.46□□□□□ -2.02
HMGCR-204ENST00000504466 CSAG1Q6PB30 78 aa2.45□□□□□ -2.02
HMGCR-204ENST00000504466 SPATA8Q6RVD6 105 aa2.45□□□□□ -2.02
HMGCR-204ENST00000504466 BRK1Q8WUW1 75 aa2.45□□□□□ -2.02
HMGCR-204ENST00000504466 A6NED7 52 aa2.44□□□□□ -2.02
HMGCR-204ENST00000504466 P0C880 135 aa2.44□□□□□ -2.02
HMGCR-204ENST00000504466 CDC42SE1Q9NRR8 79 aa2.44□□□□□ -2.02
HMGCR-204ENST00000504466 A0A1B0GU33 70 aa2.42□□□□□ -2.02
HMGCR-204ENST00000504466 H0YAA0 97 aa2.42□□□□□ -2.02
HMGCR-204ENST00000504466 UQCR11O14957 56 aa2.42□□□□□ -2.02
HMGCR-204ENST00000504466 KRTAP13-4Q3LI77 160 aa2.42□□□□□ -2.02
HMGCR-204ENST00000504466 MIR22HGQ0VDD5 57 aa2.41□□□□□ -2.02
HMGCR-204ENST00000504466 ADM2Q7Z4H4 148 aa2.41□□□□□ -2.02
HMGCR-204ENST00000504466 FAT4Q6V0I7 4981 aa2.41□□□□□ -2.02
HMGCR-204ENST00000504466 MT1HP80294 61 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms