RNA–Protein interactions for RNA: ENST00000504224.5

RNF4-205, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-205ENST00000504224 C5orf47Q569G3 176 aa9.92□□□□□ -0.82
RNF4-205ENST00000504224 C1orf64Q8NEQ6 169 aa9.89□□□□□ -0.83
RNF4-205ENST00000504224 LOC101927531A0A1B0GV80 90 aa9.88□□□□□ -0.83
RNF4-205ENST00000504224 MP68P56378 58 aa9.88□□□□□ -0.83
RNF4-205ENST00000504224 S4R3F8 94 aa9.87□□□□□ -0.83
RNF4-205ENST00000504224 CYP4F30PQ9H0H9 118 aa9.86□□□□□ -0.83
RNF4-205ENST00000504224 H3BPC8 53 aa9.84□□□□□ -0.83
RNF4-205ENST00000504224 LINC00208Q96KT6 92 aa9.84□□□□□ -0.83
RNF4-205ENST00000504224 SERP2Q8N6R1 65 aa9.82□□□□□ -0.84
RNF4-205ENST00000504224 KRTAP3-1Q9BYR8 98 aa9.81□□□□□ -0.84
RNF4-205ENST00000504224 A6NN06 94 aa9.79□□□□□ -0.84
RNF4-205ENST00000504224 CSAG1Q6PB30 78 aa9.77□□□□□ -0.85
RNF4-205ENST00000504224 LCA10Q71F78 164 aa9.76□□□□□ -0.85
RNF4-205ENST00000504224 NEBP20929 6669 aa9.74□□□□□ -0.85
RNF4-205ENST00000504224 Q5VV11 94 aa9.72□□□□□ -0.85
RNF4-205ENST00000504224 MT1BP07438 61 aa9.71□□□□□ -0.86
RNF4-205ENST00000504224 COX7CP15954 63 aa9.71□□□□□ -0.86
RNF4-205ENST00000504224 KLKP1Q107X0 134 aa9.71□□□□□ -0.86
RNF4-205ENST00000504224 ANAPC13Q9BS18 74 aa9.68□□□□□ -0.86
RNF4-205ENST00000504224 C20orf197Q8N268 126 aa9.67□□□□□ -0.86
RNF4-205ENST00000504224 SNURFQ9Y675 71 aa9.65□□□□□ -0.86
RNF4-205ENST00000504224 KRTAP19-8Q3LI54 63 aa9.63□□□□□ -0.87
RNF4-205ENST00000504224 SPRR2GQ9BYE4 73 aa9.63□□□□□ -0.87
RNF4-205ENST00000504224 MUC12Q9UKN1 5478 aa9.6□□□□□ -0.87
RNF4-205ENST00000504224 KRTAP10-5P60370 271 aa9.57□□□□□ -0.88
RNF4-205ENST00000504224 KRTAP3-3Q9BYR6 98 aa9.55□□□□□ -0.88
RNF4-205ENST00000504224 KRTAP20-1Q3LI63 56 aa9.51□□□□□ -0.89
RNF4-205ENST00000504224 A8MUN3 132 aa9.5□□□□□ -0.89
RNF4-205ENST00000504224 CCDC179H3BU77 68 aa9.49□□□□□ -0.89
RNF4-205ENST00000504224 NDUFC1O43677 76 aa9.49□□□□□ -0.89
RNF4-205ENST00000504224 CYSTM1Q9H1C7 97 aa9.47□□□□□ -0.89
RNF4-205ENST00000504224 DMAC1Q96GE9 116 aa9.46□□□□□ -0.9
RNF4-205ENST00000504224 SPANXA2-OT1Q8N9U9 137 aa9.45□□□□□ -0.9
RNF4-205ENST00000504224 H7BZZ5 65 aa9.43□□□□□ -0.9
RNF4-205ENST00000504224 KRTAP5-9P26371 169 aa9.42□□□□□ -0.9
RNF4-205ENST00000504224 CRIPTQ9P021 101 aa9.4□□□□□ -0.9
RNF4-205ENST00000504224 MDN1Q9NU22 5596 aa9.35□□□□□ -0.91
RNF4-205ENST00000504224 H0YAA0 97 aa9.34□□□□□ -0.91
RNF4-205ENST00000504224 KMT2DO14686 5537 aa9.33□□□□□ -0.92
RNF4-205ENST00000504224 ACYP2P14621 99 aa9.32□□□□□ -0.92
RNF4-205ENST00000504224 ADM2Q7Z4H4 148 aa9.26□□□□□ -0.93
RNF4-205ENST00000504224 PCP4P48539 62 aa9.2□□□□□ -0.94
RNF4-205ENST00000504224 ATP5EP56381 51 aaPredicted RBP9.16□□□□□ -0.94
RNF4-205ENST00000504224 TMEM258P61165 79 aa9.16□□□□□ -0.94
RNF4-205ENST00000504224 KRTAP2-3P0C7H8 128 aa9.15□□□□□ -0.94
RNF4-205ENST00000504224 KRTAP2-4Q9BYR9 128 aa9.15□□□□□ -0.94
RNF4-205ENST00000504224 SPRR2FQ96RM1 72 aa9.14□□□□□ -0.95
RNF4-205ENST00000504224 CHKB-CPT1BH3BT56 60 aa9.13□□□□□ -0.95
RNF4-205ENST00000504224 COA5Q86WW8 74 aa9.13□□□□□ -0.95
RNF4-205ENST00000504224 SPRR2EP22531 72 aa9.1□□□□□ -0.95
RNF4-205ENST00000504224 SPRR2BP35325 72 aa9.1□□□□□ -0.95
RNF4-205ENST00000504224 SPRR2AP35326 72 aa9.1□□□□□ -0.95
RNF4-205ENST00000504224 PRO2289Q9P1D8 64 aa9.1□□□□□ -0.95
RNF4-205ENST00000504224 R4GN34 69 aa9.07□□□□□ -0.96
RNF4-205ENST00000504224 SPTSSBQ8NFR3 76 aa9.06□□□□□ -0.96
RNF4-205ENST00000504224 MT1XP80297 61 aa9.03□□□□□ -0.96
RNF4-205ENST00000504224 P0C880 135 aa9.02□□□□□ -0.97
RNF4-205ENST00000504224 PLAC4Q8WY50 150 aa9.02□□□□□ -0.97
RNF4-205ENST00000504224 M0QZ58 72 aa8.99□□□□□ -0.97
RNF4-205ENST00000504224 KRTAP8-1Q8IUC2 63 aa8.99□□□□□ -0.97
RNF4-205ENST00000504224 KRTAP3-2Q9BYR7 98 aa8.89□□□□□ -0.99
RNF4-205ENST00000504224 LCE1AQ5T7P2 110 aa8.88□□□□□ -0.99
RNF4-205ENST00000504224 SERP1Q9Y6X1 66 aa8.88□□□□□ -0.99
RNF4-205ENST00000504224 LINC01554Q52M75 96 aa8.87□□□□□ -0.99
RNF4-205ENST00000504224 KRTAP12-2P59991 146 aa8.85□□□□□ -0.99
RNF4-205ENST00000504224 KRTAP2-2Q9BYT5 123 aa8.84□□□□□ -0.99
RNF4-205ENST00000504224 KRTAP2-1Q9BYU5 128 aa8.84□□□□□ -0.99
RNF4-205ENST00000504224 SPRR2DP22532 72 aa8.79□□□□□ -1
RNF4-205ENST00000504224 KRTAP4-8A0A0G2JLE6 195 aa8.77□□□□□ -1.01
RNF4-205ENST00000504224 KRTAP4-8Q9BYQ9 185 aa8.77□□□□□ -1.01
RNF4-205ENST00000504224 SEC61GP60059 68 aa8.69□□□□□ -1.02
RNF4-205ENST00000504224 RPS28P62857 69 aaKnown RBP8.67□□□□□ -1.02
RNF4-205ENST00000504224 LINC01558Q9Y6Z2 57 aa8.65□□□□□ -1.02
RNF4-205ENST00000504224 A0A1B0GU69 56 aa8.63□□□□□ -1.03
RNF4-205ENST00000504224 KRTAP10-7P60409 375 aaPredicted RBP8.62□□□□□ -1.03
RNF4-205ENST00000504224 SMIM26A0A096LP01 95 aa8.57□□□□□ -1.04
RNF4-205ENST00000504224 LCE3BQ5TA77 95 aa8.57□□□□□ -1.04
RNF4-205ENST00000504224 KRTAP10-12P60413 245 aa8.55□□□□□ -1.04
RNF4-205ENST00000504224 PRR15LQ9BU68 103 aa8.55□□□□□ -1.04
RNF4-205ENST00000504224 Q1T7F1 81 aa8.53□□□□□ -1.04
RNF4-205ENST00000504224 A0A1B0GU33 70 aa8.52□□□□□ -1.05
RNF4-205ENST00000504224 V9GYY9 64 aa8.52□□□□□ -1.05
RNF4-205ENST00000504224 KRTAP13-4Q3LI77 160 aa8.5□□□□□ -1.05
RNF4-205ENST00000504224 SPATA8Q6RVD6 105 aa8.39□□□□□ -1.07
RNF4-205ENST00000504224 CAMK2N1Q7Z7J9 78 aa8.38□□□□□ -1.07
RNF4-205ENST00000504224 PSPHP1O15172 72 aa8.36□□□□□ -1.07
RNF4-205ENST00000504224 UQCR11O14957 56 aa8.29□□□□□ -1.08
RNF4-205ENST00000504224 A0A0D9SG42 100 aa8.26□□□□□ -1.09
RNF4-205ENST00000504224 A8MU10 97 aa8.21□□□□□ -1.1
RNF4-205ENST00000504224 MIR22HGQ0VDD5 57 aa8.17□□□□□ -1.1
RNF4-205ENST00000504224 KRTAP12-1P59990 96 aa8.16□□□□□ -1.1
RNF4-205ENST00000504224 GPR98Q8WXG9 6306 aa8.16□□□□□ -1.1
RNF4-205ENST00000504224 SPINT4Q6UDR6 99 aa8.15□□□□□ -1.1
RNF4-205ENST00000504224 A6NED7 52 aa8.11□□□□□ -1.11
RNF4-205ENST00000504224 DSTQ03001 7570 aaKnown RBP8.11□□□□□ -1.11
RNF4-205ENST00000504224 LCE5AQ5TCM9 118 aa8.08□□□□□ -1.12
RNF4-205ENST00000504224 KRTAP4-9Q9BYQ8 210 aa8.08□□□□□ -1.12
RNF4-205ENST00000504224 KRTAP19-7Q3SYF9 63 aa8.06□□□□□ -1.12
RNF4-205ENST00000504224 KRTAP19-3Q7Z4W3 81 aa8.03□□□□□ -1.12
RNF4-205ENST00000504224 MT1EP04732 61 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms