RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 FAM236BA0A1B0GV22 79 aa10.24□□□□□ -0.77
LSM6-203ENST00000503982 H3BPC8 53 aa10.23□□□□□ -0.77
LSM6-203ENST00000503982 SCGB1A1P11684 91 aa10.23□□□□□ -0.77
LSM6-203ENST00000503982 KRTAP3-1Q9BYR8 98 aa10.23□□□□□ -0.77
LSM6-203ENST00000503982 MP68P56378 58 aa10.22□□□□□ -0.77
LSM6-203ENST00000503982 C1orf64Q8NEQ6 169 aa10.21□□□□□ -0.77
LSM6-203ENST00000503982 S4R3F8 94 aa10.21□□□□□ -0.77
LSM6-203ENST00000503982 SMIM20Q8N5G0 67 aa10.19□□□□□ -0.78
LSM6-203ENST00000503982 LINC00208Q96KT6 92 aa10.18□□□□□ -0.78
LSM6-203ENST00000503982 CSAG1Q6PB30 78 aa10.12□□□□□ -0.79
LSM6-203ENST00000503982 TRAV7A0A075B6U4 112 aa10.11□□□□□ -0.79
LSM6-203ENST00000503982 LCA10Q71F78 164 aa10.08□□□□□ -0.8
LSM6-203ENST00000503982 KLKP1Q107X0 134 aa10.07□□□□□ -0.8
LSM6-203ENST00000503982 A8MUN3 132 aa10.05□□□□□ -0.8
LSM6-203ENST00000503982 Q5VV11 94 aa9.98□□□□□ -0.81
LSM6-203ENST00000503982 A6NN06 94 aa9.94□□□□□ -0.82
LSM6-203ENST00000503982 KRTAP6-3Q3LI67 103 aa9.94□□□□□ -0.82
LSM6-203ENST00000503982 SERP2Q8N6R1 65 aa9.93□□□□□ -0.82
LSM6-203ENST00000503982 DMAC1Q96GE9 116 aa9.89□□□□□ -0.83
LSM6-203ENST00000503982 MT1BP07438 61 aa9.87□□□□□ -0.83
LSM6-203ENST00000503982 SPRR2GQ9BYE4 73 aa9.87□□□□□ -0.83
LSM6-203ENST00000503982 KRTAP19-8Q3LI54 63 aa9.84□□□□□ -0.83
LSM6-203ENST00000503982 NDUFC1O43677 76 aa9.79□□□□□ -0.84
LSM6-203ENST00000503982 C20orf197Q8N268 126 aa9.77□□□□□ -0.85
LSM6-203ENST00000503982 SNURFQ9Y675 71 aa9.76□□□□□ -0.85
LSM6-203ENST00000503982 H0YAA0 97 aa9.74□□□□□ -0.85
LSM6-203ENST00000503982 COX7CP15954 63 aa9.74□□□□□ -0.85
LSM6-203ENST00000503982 SPANXA2-OT1Q8N9U9 137 aa9.74□□□□□ -0.85
LSM6-203ENST00000503982 CRIPTQ9P021 101 aa9.72□□□□□ -0.85
LSM6-203ENST00000503982 KRTAP10-5P60370 271 aa9.7□□□□□ -0.86
LSM6-203ENST00000503982 ACYP2P14621 99 aa9.68□□□□□ -0.86
LSM6-203ENST00000503982 NEBP20929 6669 aa9.62□□□□□ -0.87
LSM6-203ENST00000503982 ADM2Q7Z4H4 148 aa9.57□□□□□ -0.88
LSM6-203ENST00000503982 ANAPC13Q9BS18 74 aa9.56□□□□□ -0.88
LSM6-203ENST00000503982 MUC12Q9UKN1 5478 aa9.56□□□□□ -0.88
LSM6-203ENST00000503982 H7BZZ5 65 aa9.52□□□□□ -0.89
LSM6-203ENST00000503982 SPTSSBQ8NFR3 76 aa9.5□□□□□ -0.89
LSM6-203ENST00000503982 CYSTM1Q9H1C7 97 aa9.47□□□□□ -0.89
LSM6-203ENST00000503982 CHKB-CPT1BH3BT56 60 aa9.43□□□□□ -0.9
LSM6-203ENST00000503982 PLAC4Q8WY50 150 aa9.39□□□□□ -0.91
LSM6-203ENST00000503982 PRO2289Q9P1D8 64 aa9.38□□□□□ -0.91
LSM6-203ENST00000503982 KRTAP5-9P26371 169 aa9.37□□□□□ -0.91
LSM6-203ENST00000503982 R4GN34 69 aa9.36□□□□□ -0.91
LSM6-203ENST00000503982 CCDC179H3BU77 68 aa9.34□□□□□ -0.91
LSM6-203ENST00000503982 KRTAP20-1Q3LI63 56 aa9.34□□□□□ -0.91
LSM6-203ENST00000503982 COA5Q86WW8 74 aa9.34□□□□□ -0.91
LSM6-203ENST00000503982 P0C880 135 aa9.33□□□□□ -0.92
LSM6-203ENST00000503982 KMT2DO14686 5537 aa9.3□□□□□ -0.92
LSM6-203ENST00000503982 MDN1Q9NU22 5596 aa9.28□□□□□ -0.92
LSM6-203ENST00000503982 M0QZ58 72 aa9.28□□□□□ -0.92
LSM6-203ENST00000503982 ATP5EP56381 51 aaPredicted RBP9.23□□□□□ -0.93
LSM6-203ENST00000503982 MT1XP80297 61 aa9.23□□□□□ -0.93
LSM6-203ENST00000503982 LINC01554Q52M75 96 aa9.21□□□□□ -0.94
LSM6-203ENST00000503982 SPRR2FQ96RM1 72 aa9.2□□□□□ -0.94
LSM6-203ENST00000503982 TMEM258P61165 79 aa9.12□□□□□ -0.95
LSM6-203ENST00000503982 KRTAP8-1Q8IUC2 63 aa9.12□□□□□ -0.95
LSM6-203ENST00000503982 SPRR2EP22531 72 aa9.11□□□□□ -0.95
LSM6-203ENST00000503982 SPRR2BP35325 72 aa9.11□□□□□ -0.95
LSM6-203ENST00000503982 SPRR2AP35326 72 aa9.11□□□□□ -0.95
LSM6-203ENST00000503982 KRTAP2-3P0C7H8 128 aa9.03□□□□□ -0.96
LSM6-203ENST00000503982 KRTAP2-4Q9BYR9 128 aa9.03□□□□□ -0.96
LSM6-203ENST00000503982 KRTAP12-2P59991 146 aa9.02□□□□□ -0.97
LSM6-203ENST00000503982 SEC61GP60059 68 aa9□□□□□ -0.97
LSM6-203ENST00000503982 SERP1Q9Y6X1 66 aa8.97□□□□□ -0.97
LSM6-203ENST00000503982 KRTAP4-8A0A0G2JLE6 195 aa8.91□□□□□ -0.98
LSM6-203ENST00000503982 KRTAP4-8Q9BYQ9 185 aa8.91□□□□□ -0.98
LSM6-203ENST00000503982 KRTAP13-4Q3LI77 160 aa8.9□□□□□ -0.98
LSM6-203ENST00000503982 LCE1AQ5T7P2 110 aa8.86□□□□□ -0.99
LSM6-203ENST00000503982 A0A1B0GU69 56 aa8.84□□□□□ -0.99
LSM6-203ENST00000503982 KRTAP10-7P60409 375 aaPredicted RBP8.84□□□□□ -0.99
LSM6-203ENST00000503982 A0A1B0GU33 70 aa8.82□□□□□ -1
LSM6-203ENST00000503982 SPRR2DP22532 72 aa8.81□□□□□ -1
LSM6-203ENST00000503982 LINC01558Q9Y6Z2 57 aa8.78□□□□□ -1
LSM6-203ENST00000503982 KRTAP10-12P60413 245 aa8.75□□□□□ -1.01
LSM6-203ENST00000503982 KRTAP2-2Q9BYT5 123 aa8.74□□□□□ -1.01
LSM6-203ENST00000503982 KRTAP2-1Q9BYU5 128 aa8.74□□□□□ -1.01
LSM6-203ENST00000503982 PRR15LQ9BU68 103 aa8.73□□□□□ -1.01
LSM6-203ENST00000503982 PCP4P48539 62 aa8.69□□□□□ -1.02
LSM6-203ENST00000503982 SPATA8Q6RVD6 105 aa8.68□□□□□ -1.02
LSM6-203ENST00000503982 CAMK2N1Q7Z7J9 78 aa8.63□□□□□ -1.03
LSM6-203ENST00000503982 SMIM26A0A096LP01 95 aa8.6□□□□□ -1.03
LSM6-203ENST00000503982 A0A0D9SG42 100 aa8.56□□□□□ -1.04
LSM6-203ENST00000503982 LCE3BQ5TA77 95 aa8.55□□□□□ -1.04
LSM6-203ENST00000503982 V9GYY9 64 aa8.55□□□□□ -1.04
LSM6-203ENST00000503982 KRTAP12-1P59990 96 aa8.54□□□□□ -1.04
LSM6-203ENST00000503982 Q1T7F1 81 aa8.51□□□□□ -1.05
LSM6-203ENST00000503982 RPS28P62857 69 aaKnown RBP8.49□□□□□ -1.05
LSM6-203ENST00000503982 UQCR11O14957 56 aa8.46□□□□□ -1.06
LSM6-203ENST00000503982 A8MU10 97 aa8.44□□□□□ -1.06
LSM6-203ENST00000503982 SPINT4Q6UDR6 99 aa8.43□□□□□ -1.06
LSM6-203ENST00000503982 PSPHP1O15172 72 aa8.29□□□□□ -1.08
LSM6-203ENST00000503982 MIR22HGQ0VDD5 57 aa8.27□□□□□ -1.09
LSM6-203ENST00000503982 KRTAP19-7Q3SYF9 63 aa8.23□□□□□ -1.09
LSM6-203ENST00000503982 DSTQ03001 7570 aaKnown RBP8.2□□□□□ -1.1
LSM6-203ENST00000503982 MT1EP04732 61 aa8.2□□□□□ -1.1
LSM6-203ENST00000503982 KRTAP19-3Q7Z4W3 81 aa8.18□□□□□ -1.1
LSM6-203ENST00000503982 LCE5AQ5TCM9 118 aa8.17□□□□□ -1.1
LSM6-203ENST00000503982 C10orf95Q9H7T3 257 aa8.1□□□□□ -1.11
LSM6-203ENST00000503982 KRTAP19-5Q3LI72 72 aa8.07□□□□□ -1.12
LSM6-203ENST00000503982 A6NED7 52 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms