RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 ATP5EP56381 51 aaPredicted RBP8.01□□□□□ -1.13
SCLT1-205ENST00000503401 KRTAP3-1Q9BYR8 98 aa8.01□□□□□ -1.13
SCLT1-205ENST00000503401 C1orf64Q8NEQ6 169 aa8□□□□□ -1.13
SCLT1-205ENST00000503401 KRTAP9-8Q9BYQ0 159 aa8□□□□□ -1.13
SCLT1-205ENST00000503401 LINC00208Q96KT6 92 aa7.99□□□□□ -1.13
SCLT1-205ENST00000503401 KLKP1Q107X0 134 aa7.98□□□□□ -1.13
SCLT1-205ENST00000503401 C20orf197Q8N268 126 aa7.97□□□□□ -1.13
SCLT1-205ENST00000503401 CYSTM1Q9H1C7 97 aa7.95□□□□□ -1.14
SCLT1-205ENST00000503401 SMIM26A0A096LP01 95 aa7.94□□□□□ -1.14
SCLT1-205ENST00000503401 PRO0628Q9UI54 55 aa7.94□□□□□ -1.14
SCLT1-205ENST00000503401 SNURFQ9Y675 71 aa7.92□□□□□ -1.14
SCLT1-205ENST00000503401 MT2AP02795 61 aa7.92□□□□□ -1.14
SCLT1-205ENST00000503401 H7BZZ5 65 aa7.9□□□□□ -1.14
SCLT1-205ENST00000503401 MT1FP04733 61 aa7.88□□□□□ -1.15
SCLT1-205ENST00000503401 S4R3F8 94 aa7.88□□□□□ -1.15
SCLT1-205ENST00000503401 LCA10Q71F78 164 aa7.85□□□□□ -1.15
SCLT1-205ENST00000503401 FSIP2Q5CZC0 6907 aa7.84□□□□□ -1.15
SCLT1-205ENST00000503401 KRTAP10-10P60014 251 aa7.84□□□□□ -1.15
SCLT1-205ENST00000503401 SPANXA2-OT1Q8N9U9 137 aa7.76□□□□□ -1.17
SCLT1-205ENST00000503401 CSAG1Q6PB30 78 aa7.75□□□□□ -1.17
SCLT1-205ENST00000503401 A8MUN3 132 aa7.73□□□□□ -1.17
SCLT1-205ENST00000503401 KRTAP9-3Q9BYQ3 159 aa7.73□□□□□ -1.17
SCLT1-205ENST00000503401 USH2AO75445 5202 aa7.67□□□□□ -1.18
SCLT1-205ENST00000503401 DMAC1Q96GE9 116 aa7.67□□□□□ -1.18
SCLT1-205ENST00000503401 KRTAP9-6A0A140TA67 174 aa7.63□□□□□ -1.19
SCLT1-205ENST00000503401 V9GYY9 64 aa7.63□□□□□ -1.19
SCLT1-205ENST00000503401 BRK1Q8WUW1 75 aa7.63□□□□□ -1.19
SCLT1-205ENST00000503401 CRCT1Q9UGL9 99 aa7.62□□□□□ -1.19
SCLT1-205ENST00000503401 Q1T7F1 81 aa7.59□□□□□ -1.19
SCLT1-205ENST00000503401 SSPOA2VEC9 5147 aa7.55□□□□□ -1.2
SCLT1-205ENST00000503401 ACYP2P14621 99 aa7.55□□□□□ -1.2
SCLT1-205ENST00000503401 SEC61GP60059 68 aa7.51□□□□□ -1.21
SCLT1-205ENST00000503401 KRTAP19-1Q8IUB9 90 aa7.48□□□□□ -1.21
SCLT1-205ENST00000503401 COA5Q86WW8 74 aa7.47□□□□□ -1.21
SCLT1-205ENST00000503401 H0YAA0 97 aa7.46□□□□□ -1.21
SCLT1-205ENST00000503401 PMAIP1Q13794 54 aa7.46□□□□□ -1.21
SCLT1-205ENST00000503401 ADM2Q7Z4H4 148 aa7.46□□□□□ -1.21
SCLT1-205ENST00000503401 CHKB-CPT1BH3BT56 60 aa7.41□□□□□ -1.22
SCLT1-205ENST00000503401 SPRR2GQ9BYE4 73 aa7.41□□□□□ -1.22
SCLT1-205ENST00000503401 CRIPTQ9P021 101 aa7.36□□□□□ -1.23
SCLT1-205ENST00000503401 P0C880 135 aa7.35□□□□□ -1.23
SCLT1-205ENST00000503401 SPTSSBQ8NFR3 76 aa7.34□□□□□ -1.23
SCLT1-205ENST00000503401 FCGBPQ9Y6R7 5405 aaPredicted RBP7.31□□□□□ -1.24
SCLT1-205ENST00000503401 KRTAP19-8Q3LI54 63 aa7.3□□□□□ -1.24
SCLT1-205ENST00000503401 MT1BP07438 61 aa7.3□□□□□ -1.24
SCLT1-205ENST00000503401 PSPHP1O15172 72 aa7.29□□□□□ -1.24
SCLT1-205ENST00000503401 Q5VV11 94 aa7.29□□□□□ -1.24
SCLT1-205ENST00000503401 H3BS24 57 aa7.28□□□□□ -1.24
SCLT1-205ENST00000503401 KRTAP19-6Q3LI70 58 aa7.28□□□□□ -1.24
SCLT1-205ENST00000503401 KTN1-AS1Q86SY8 53 aa7.23□□□□□ -1.25
SCLT1-205ENST00000503401 R4GN34 69 aa7.23□□□□□ -1.25
SCLT1-205ENST00000503401 M0QZ58 72 aa7.2□□□□□ -1.26
SCLT1-205ENST00000503401 PRR15LQ9BU68 103 aa7.17□□□□□ -1.26
SCLT1-205ENST00000503401 CDC42SE1Q9NRR8 79 aa7.17□□□□□ -1.26
SCLT1-205ENST00000503401 LINC01558Q9Y6Z2 57 aa7.16□□□□□ -1.26
SCLT1-205ENST00000503401 KRTAP4-8Q9BYQ9 185 aa7.16□□□□□ -1.26
SCLT1-205ENST00000503401 A6NED7 52 aa7.14□□□□□ -1.27
SCLT1-205ENST00000503401 LINC01554Q52M75 96 aa7.11□□□□□ -1.27
SCLT1-205ENST00000503401 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.09□□□□□ -1.27
SCLT1-205ENST00000503401 A6NN06 94 aa7.09□□□□□ -1.28
SCLT1-205ENST00000503401 MACF1Q9UPN3 7388 aaKnown RBP7.06□□□□□ -1.28
SCLT1-205ENST00000503401 KRTAP10-5P60370 271 aa7.05□□□□□ -1.28
SCLT1-205ENST00000503401 A0A1B0GU69 56 aa7.04□□□□□ -1.28
SCLT1-205ENST00000503401 PLAC4Q8WY50 150 aa7.03□□□□□ -1.28
SCLT1-205ENST00000503401 KRTAP13-4Q3LI77 160 aa7.01□□□□□ -1.29
SCLT1-205ENST00000503401 A8MU10 97 aa6.97□□□□□ -1.29
SCLT1-205ENST00000503401 SYNE2Q8WXH0 6885 aaKnown RBP6.96□□□□□ -1.3
SCLT1-205ENST00000503401 MT1XP80297 61 aa6.93□□□□□ -1.3
SCLT1-205ENST00000503401 A0A1B0GU33 70 aa6.91□□□□□ -1.3
SCLT1-205ENST00000503401 KRTAP9-7A8MTY7 169 aa6.9□□□□□ -1.3
SCLT1-205ENST00000503401 SPATA8Q6RVD6 105 aa6.88□□□□□ -1.31
SCLT1-205ENST00000503401 PRO2289Q9P1D8 64 aa6.87□□□□□ -1.31
SCLT1-205ENST00000503401 A0A0D9SG42 100 aa6.83□□□□□ -1.32
SCLT1-205ENST00000503401 UQCR11O14957 56 aa6.82□□□□□ -1.32
SCLT1-205ENST00000503401 LCE3BQ5TA77 95 aa6.77□□□□□ -1.33
SCLT1-205ENST00000503401 KMT2DO14686 5537 aa6.75□□□□□ -1.33
SCLT1-205ENST00000503401 KRTAP4-8A0A0G2JLE6 195 aa6.75□□□□□ -1.33
SCLT1-205ENST00000503401 MIR22HGQ0VDD5 57 aa6.72□□□□□ -1.33
SCLT1-205ENST00000503401 SPINT4Q6UDR6 99 aa6.7□□□□□ -1.34
SCLT1-205ENST00000503401 CAMK2N1Q7Z7J9 78 aa6.7□□□□□ -1.34
SCLT1-205ENST00000503401 KRTAP6-3Q3LI67 103 aa6.69□□□□□ -1.34
SCLT1-205ENST00000503401 KRTAP12-1P59990 96 aa6.67□□□□□ -1.34
SCLT1-205ENST00000503401 KRTAP12-2P59991 146 aa6.65□□□□□ -1.35
SCLT1-205ENST00000503401 KRTAP9-9Q9BYP9 154 aa6.65□□□□□ -1.35
SCLT1-205ENST00000503401 KRTAP9-4Q9BYQ2 154 aa6.65□□□□□ -1.35
SCLT1-205ENST00000503401 KRTAP10-7P60409 375 aaPredicted RBP6.64□□□□□ -1.35
SCLT1-205ENST00000503401 PRAC1Q96KF2 57 aa6.59□□□□□ -1.35
SCLT1-205ENST00000503401 MUC12Q9UKN1 5478 aa6.58□□□□□ -1.36
SCLT1-205ENST00000503401 KRTAP4-7Q9BYR0 210 aa6.58□□□□□ -1.36
SCLT1-205ENST00000503401 KRTAP10-12P60413 245 aa6.56□□□□□ -1.36
SCLT1-205ENST00000503401 KRTAP5-9P26371 169 aa6.53□□□□□ -1.36
SCLT1-205ENST00000503401 KRTAP19-4Q3LI73 84 aa6.51□□□□□ -1.37
SCLT1-205ENST00000503401 KRTAP8-1Q8IUC2 63 aa6.51□□□□□ -1.37
SCLT1-205ENST00000503401 KRTAP4-12Q9BQ66 201 aa6.48□□□□□ -1.37
SCLT1-205ENST00000503401 SPRR2FQ96RM1 72 aa6.46□□□□□ -1.38
SCLT1-205ENST00000503401 MDN1Q9NU22 5596 aa6.44□□□□□ -1.38
SCLT1-205ENST00000503401 NEBP20929 6669 aa6.43□□□□□ -1.38
SCLT1-205ENST00000503401 K7ERS5 55 aa6.39□□□□□ -1.39
SCLT1-205ENST00000503401 KRTAP25-1Q3LHN0 102 aa6.37□□□□□ -1.39
SCLT1-205ENST00000503401 C10orf95Q9H7T3 257 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms