RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 KRTAP11-1Q8IUC1 163 aa3.02□□□□□ -1.93
HTT-202ENST00000502820 MRPL34Q9BQ48 92 aaKnown RBP3.02□□□□□ -1.93
HTT-202ENST00000502820 C8orf17Q9NRJ1 99 aa3.02□□□□□ -1.93
HTT-202ENST00000502820 ZNF706Q9Y5V0 76 aaPredicted RBP3.02□□□□□ -1.93
HTT-202ENST00000502820 A0A1B0GU69 56 aa3.01□□□□□ -1.93
HTT-202ENST00000502820 A0A1B0GVX0 72 aa3.01□□□□□ -1.93
HTT-202ENST00000502820 FAM168BA1KXE4 195 aa3.01□□□□□ -1.93
HTT-202ENST00000502820 DMAC1Q96GE9 116 aa3.01□□□□□ -1.93
HTT-202ENST00000502820 KRTAP4-7Q9BYR0 210 aa3□□□□□ -1.93
HTT-202ENST00000502820 H3BS24 57 aa2.99□□□□□ -1.93
HTT-202ENST00000502820 IGLV7-43P04211 117 aa2.99□□□□□ -1.93
HTT-202ENST00000502820 PCOTHQ58A44 107 aa2.99□□□□□ -1.93
HTT-202ENST00000502820 KRTAP19-1Q8IUB9 90 aa2.99□□□□□ -1.93
HTT-202ENST00000502820 IGHV6-1A0A0B4J1U7 121 aa2.98□□□□□ -1.93
HTT-202ENST00000502820 KRTAP1-4P0C5Y4 121 aa2.98□□□□□ -1.93
HTT-202ENST00000502820 MIR22HGQ0VDD5 57 aa2.98□□□□□ -1.93
HTT-202ENST00000502820 DEFB116Q30KQ4 102 aa2.98□□□□□ -1.93
HTT-202ENST00000502820 LINC00483Q53H64 154 aa2.98□□□□□ -1.93
HTT-202ENST00000502820 M0R2T5 61 aa2.97□□□□□ -1.93
HTT-202ENST00000502820 TYMSOSQ8TAI1 123 aa2.97□□□□□ -1.93
HTT-202ENST00000502820 Q96NJ1 140 aa2.97□□□□□ -1.93
HTT-202ENST00000502820 NOTCH2NLQ7Z3S9 236 aa2.96□□□□□ -1.94
HTT-202ENST00000502820 ZNF861PO60384 105 aa2.95□□□□□ -1.94
HTT-202ENST00000502820 PRLHP81277 87 aa2.95□□□□□ -1.94
HTT-202ENST00000502820 KRTAP13-3Q3SY46 172 aa2.95□□□□□ -1.94
HTT-202ENST00000502820 KRTAP13-1Q8IUC0 172 aa2.94□□□□□ -1.94
HTT-202ENST00000502820 TPRXLQ17RH7 258 aa2.93□□□□□ -1.94
HTT-202ENST00000502820 ANAPC11Q9NYG5 84 aa2.93□□□□□ -1.94
HTT-202ENST00000502820 LCE1DQ5T752 114 aa2.92□□□□□ -1.94
HTT-202ENST00000502820 KRTAP4-1Q9BYQ7 146 aa2.92□□□□□ -1.94
HTT-202ENST00000502820 MUC17Q685J3 4493 aa2.91□□□□□ -1.94
HTT-202ENST00000502820 PRAC1Q96KF2 57 aa2.91□□□□□ -1.94
HTT-202ENST00000502820 IGKV2-30P06310 120 aa2.9□□□□□ -1.95
HTT-202ENST00000502820 SEC61BP60468 96 aaKnown RBP2.9□□□□□ -1.95
HTT-202ENST00000502820 MT1HP80294 61 aa2.9□□□□□ -1.95
HTT-202ENST00000502820 KRTAP13-2Q52LG2 175 aa2.9□□□□□ -1.95
HTT-202ENST00000502820 LINC00304Q8N9R0 145 aa2.9□□□□□ -1.95
HTT-202ENST00000502820 KRTAP4-2Q9BYR5 136 aa2.9□□□□□ -1.95
HTT-202ENST00000502820 KRTAP10-6P60371 365 aaPredicted RBP2.89□□□□□ -1.95
HTT-202ENST00000502820 CSAG1Q6PB30 78 aa2.89□□□□□ -1.95
HTT-202ENST00000502820 KRTAP4-9Q9BYQ8 210 aa2.89□□□□□ -1.95
HTT-202ENST00000502820 A0A0G2JQZ4 141 aa2.88□□□□□ -1.95
HTT-202ENST00000502820 K7ERS5 55 aa2.88□□□□□ -1.95
HTT-202ENST00000502820 ROMO1P60602 79 aa2.88□□□□□ -1.95
HTT-202ENST00000502820 KRTAP25-1Q3LHN0 102 aa2.88□□□□□ -1.95
HTT-202ENST00000502820 Q5W150 140 aa2.88□□□□□ -1.95
HTT-202ENST00000502820 SSBP3-AS1Q7Z2R9 100 aa2.88□□□□□ -1.95
HTT-202ENST00000502820 SYNE2Q8WXH0 6885 aaKnown RBP2.87□□□□□ -1.95
HTT-202ENST00000502820 IGKV2D-30A0A075B6S6 120 aa2.86□□□□□ -1.95
HTT-202ENST00000502820 IGLV9-49A0A0B4J1Y8 123 aa2.86□□□□□ -1.95
HTT-202ENST00000502820 COX6B2Q6YFQ2 88 aa2.86□□□□□ -1.95
HTT-202ENST00000502820 ADM2Q7Z4H4 148 aa2.86□□□□□ -1.95
HTT-202ENST00000502820 A8MUU9 505 aa2.85□□□□□ -1.95
HTT-202ENST00000502820 MACF1Q9UPN3 7388 aaKnown RBP2.84□□□□□ -1.96
HTT-202ENST00000502820 USH2AO75445 5202 aa2.81□□□□□ -1.96
HTT-202ENST00000502820 SPINK1P00995 79 aa2.79□□□□□ -1.96
HTT-202ENST00000502820 RPS29P62273 56 aaKnown RBP2.79□□□□□ -1.96
HTT-202ENST00000502820 SSPOA2VEC9 5147 aa2.79□□□□□ -1.96
HTT-202ENST00000502820 A0A1B0GU33 70 aa2.78□□□□□ -1.96
HTT-202ENST00000502820 KRTAP19-2Q3LHN2 52 aa2.78□□□□□ -1.96
HTT-202ENST00000502820 FCGBPQ9Y6R7 5405 aaPredicted RBP2.78□□□□□ -1.97
HTT-202ENST00000502820 KRTAP16-1A8MUX0 517 aa2.77□□□□□ -1.97
HTT-202ENST00000502820 C9orf92A6NGG3 77 aa2.76□□□□□ -1.97
HTT-202ENST00000502820 H1FX-AS1Q4G0G2 97 aa2.76□□□□□ -1.97
HTT-202ENST00000502820 H0YAA0 97 aa2.75□□□□□ -1.97
HTT-202ENST00000502820 KRTAP5-3Q6L8H2 238 aa2.75□□□□□ -1.97
HTT-202ENST00000502820 KRTAP4-11Q9BYQ6 195 aa2.75□□□□□ -1.97
HTT-202ENST00000502820 KRTAP20-1Q3LI63 56 aa2.71□□□□□ -1.98
HTT-202ENST00000502820 RPL37P61927 97 aaKnown RBP2.7□□□□□ -1.98
HTT-202ENST00000502820 KRTAP6-3Q3LI67 103 aa2.69□□□□□ -1.98
HTT-202ENST00000502820 SPINT4Q6UDR6 99 aa2.68□□□□□ -1.98
HTT-202ENST00000502820 C20orf166-AS1Q96NR2 134 aa2.68□□□□□ -1.98
HTT-202ENST00000502820 P0C880 135 aa2.67□□□□□ -1.98
HTT-202ENST00000502820 KRTAP9-8Q9BYQ0 159 aa2.67□□□□□ -1.98
HTT-202ENST00000502820 NEBP20929 6669 aa2.67□□□□□ -1.98
HTT-202ENST00000502820 KRTAP10-10P60014 251 aa2.65□□□□□ -1.99
HTT-202ENST00000502820 LCE4AQ5TA78 99 aa2.65□□□□□ -1.99
HTT-202ENST00000502820 CRIPTQ9P021 101 aa2.65□□□□□ -1.99
HTT-202ENST00000502820 KRTAP15-1Q3LI76 137 aa2.63□□□□□ -1.99
HTT-202ENST00000502820 MT2AP02795 61 aa2.61□□□□□ -1.99
HTT-202ENST00000502820 FLGP20930 4061 aaPredicted RBP2.61□□□□□ -1.99
HTT-202ENST00000502820 MT1FP04733 61 aa2.6□□□□□ -1.99
HTT-202ENST00000502820 NDUFAF8A1L188 74 aa2.59□□□□□ -1.99
HTT-202ENST00000502820 MUC12Q9UKN1 5478 aa2.58□□□□□ -2
HTT-202ENST00000502820 KRTAP19-6Q3LI70 58 aa2.58□□□□□ -2
HTT-202ENST00000502820 KRTAP9-3Q9BYQ3 159 aa2.58□□□□□ -2
HTT-202ENST00000502820 A0A0A0MQY5 61 aa2.57□□□□□ -2
HTT-202ENST00000502820 KRTAP3-1Q9BYR8 98 aa2.56□□□□□ -2
HTT-202ENST00000502820 M0QZ58 72 aa2.55□□□□□ -2
HTT-202ENST00000502820 LUZP6Q538Z0 58 aa2.54□□□□□ -2
HTT-202ENST00000502820 S4R3F8 94 aa2.54□□□□□ -2
HTT-202ENST00000502820 LCE5AQ5TCM9 118 aa2.53□□□□□ -2
HTT-202ENST00000502820 KMT2DO14686 5537 aa2.52□□□□□ -2.01
HTT-202ENST00000502820 KRTAP2-3P0C7H8 128 aa2.52□□□□□ -2.01
HTT-202ENST00000502820 KRTAP2-4Q9BYR9 128 aa2.52□□□□□ -2.01
HTT-202ENST00000502820 PP632Q6XCG6 107 aa2.51□□□□□ -2.01
HTT-202ENST00000502820 KRTAP12-1P59990 96 aa2.47□□□□□ -2.01
HTT-202ENST00000502820 KRTAP13-4Q3LI77 160 aa2.47□□□□□ -2.01
HTT-202ENST00000502820 A0A0D9SG42 100 aa2.46□□□□□ -2.02
HTT-202ENST00000502820 CAMK2N1Q7Z7J9 78 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms