RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 RNF213Q63HN8 5207 aa6.73□□□□□ -1.33
SGCA-203ENST00000502555 KRTAP19-2Q3LHN2 52 aa6.73□□□□□ -1.33
SGCA-203ENST00000502555 S4R3F8 94 aa6.69□□□□□ -1.34
SGCA-203ENST00000502555 SPTSSBQ8NFR3 76 aa6.66□□□□□ -1.34
SGCA-203ENST00000502555 LCA10Q71F78 164 aa6.64□□□□□ -1.35
SGCA-203ENST00000502555 MUC2Q02817 5179 aa6.62□□□□□ -1.35
SGCA-203ENST00000502555 SMIM26A0A096LP01 95 aa6.61□□□□□ -1.35
SGCA-203ENST00000502555 LCE2CQ5TA81 110 aa6.61□□□□□ -1.35
SGCA-203ENST00000502555 CSAG1Q6PB30 78 aa6.56□□□□□ -1.36
SGCA-203ENST00000502555 V9GYY9 64 aa6.51□□□□□ -1.37
SGCA-203ENST00000502555 MT1HP80294 61 aa6.5□□□□□ -1.37
SGCA-203ENST00000502555 Q1T7F1 81 aa6.5□□□□□ -1.37
SGCA-203ENST00000502555 LINC01558Q9Y6Z2 57 aa6.49□□□□□ -1.37
SGCA-203ENST00000502555 H0YAA0 97 aa6.44□□□□□ -1.38
SGCA-203ENST00000502555 SEC61GP60059 68 aa6.44□□□□□ -1.38
SGCA-203ENST00000502555 FLGP20930 4061 aaPredicted RBP6.43□□□□□ -1.38
SGCA-203ENST00000502555 M0R2T5 61 aa6.43□□□□□ -1.38
SGCA-203ENST00000502555 A0A1B0GU69 56 aa6.42□□□□□ -1.38
SGCA-203ENST00000502555 PRR15LQ9BU68 103 aa6.42□□□□□ -1.38
SGCA-203ENST00000502555 KRTAP9-2Q9BYQ4 174 aa6.42□□□□□ -1.38
SGCA-203ENST00000502555 FAT4Q6V0I7 4981 aa6.39□□□□□ -1.39
SGCA-203ENST00000502555 ADM2Q7Z4H4 148 aa6.36□□□□□ -1.39
SGCA-203ENST00000502555 KRTAP9-6A0A140TA67 174 aa6.35□□□□□ -1.39
SGCA-203ENST00000502555 PSPHP1O15172 72 aa6.35□□□□□ -1.39
SGCA-203ENST00000502555 KRTAP10-6P60371 365 aaPredicted RBP6.33□□□□□ -1.4
SGCA-203ENST00000502555 LCE2AQ5TA79 106 aaPredicted RBP6.33□□□□□ -1.4
SGCA-203ENST00000502555 Q5VV11 94 aa6.31□□□□□ -1.4
SGCA-203ENST00000502555 LCE2BO14633 110 aa6.29□□□□□ -1.4
SGCA-203ENST00000502555 P0C880 135 aa6.29□□□□□ -1.4
SGCA-203ENST00000502555 A0A1B0GU33 70 aa6.26□□□□□ -1.41
SGCA-203ENST00000502555 LORP23490 312 aaPredicted RBP6.25□□□□□ -1.41
SGCA-203ENST00000502555 KRTAP9-8Q9BYQ0 159 aa6.24□□□□□ -1.41
SGCA-203ENST00000502555 UQCR11O14957 56 aa6.22□□□□□ -1.41
SGCA-203ENST00000502555 MT2AP02795 61 aa6.22□□□□□ -1.41
SGCA-203ENST00000502555 CRIPTQ9P021 101 aa6.21□□□□□ -1.42
SGCA-203ENST00000502555 A6NED7 52 aa6.19□□□□□ -1.42
SGCA-203ENST00000502555 M0QZ58 72 aa6.19□□□□□ -1.42
SGCA-203ENST00000502555 MT1FP04733 61 aa6.17□□□□□ -1.42
SGCA-203ENST00000502555 KRTAP10-10P60014 251 aa6.16□□□□□ -1.42
SGCA-203ENST00000502555 R4GN34 69 aa6.16□□□□□ -1.42
SGCA-203ENST00000502555 MIR22HGQ0VDD5 57 aa6.13□□□□□ -1.43
SGCA-203ENST00000502555 KRTAP13-4Q3LI77 160 aa6.13□□□□□ -1.43
SGCA-203ENST00000502555 SPATA8Q6RVD6 105 aa6.11□□□□□ -1.43
SGCA-203ENST00000502555 CDC42SE1Q9NRR8 79 aa6.07□□□□□ -1.44
SGCA-203ENST00000502555 SPRR2GQ9BYE4 73 aa6.06□□□□□ -1.44
SGCA-203ENST00000502555 FSIP2Q5CZC0 6907 aa6.06□□□□□ -1.44
SGCA-203ENST00000502555 KRTAP19-1Q8IUB9 90 aa6.03□□□□□ -1.44
SGCA-203ENST00000502555 BRK1Q8WUW1 75 aa6.02□□□□□ -1.45
SGCA-203ENST00000502555 KRTAP9-3Q9BYQ3 159 aa6.02□□□□□ -1.45
SGCA-203ENST00000502555 A8MU10 97 aa6.01□□□□□ -1.45
SGCA-203ENST00000502555 A0A0D9SG42 100 aa6□□□□□ -1.45
SGCA-203ENST00000502555 LINC01554Q52M75 96 aa6□□□□□ -1.45
SGCA-203ENST00000502555 CRCT1Q9UGL9 99 aa5.99□□□□□ -1.45
SGCA-203ENST00000502555 A6NN06 94 aa5.98□□□□□ -1.45
SGCA-203ENST00000502555 KRTAP19-8Q3LI54 63 aa5.93□□□□□ -1.46
SGCA-203ENST00000502555 K7ERS5 55 aa5.91□□□□□ -1.46
SGCA-203ENST00000502555 KRTAP12-1P59990 96 aa5.91□□□□□ -1.46
SGCA-203ENST00000502555 KRTAP12-2P59991 146 aa5.88□□□□□ -1.47
SGCA-203ENST00000502555 SPINT4Q6UDR6 99 aa5.88□□□□□ -1.47
SGCA-203ENST00000502555 PRO0628Q9UI54 55 aa5.86□□□□□ -1.47
SGCA-203ENST00000502555 PLAC4Q8WY50 150 aa5.83□□□□□ -1.48
SGCA-203ENST00000502555 MT1BP07438 61 aa5.82□□□□□ -1.48
SGCA-203ENST00000502555 CAMK2N1Q7Z7J9 78 aa5.76□□□□□ -1.49
SGCA-203ENST00000502555 H3BS24 57 aa5.72□□□□□ -1.49
SGCA-203ENST00000502555 PMAIP1Q13794 54 aa5.7□□□□□ -1.5
SGCA-203ENST00000502555 KRTAP9-7A8MTY7 169 aa5.67□□□□□ -1.5
SGCA-203ENST00000502555 ROMO1P60602 79 aa5.62□□□□□ -1.51
SGCA-203ENST00000502555 PRO2289Q9P1D8 64 aa5.62□□□□□ -1.51
SGCA-203ENST00000502555 MT1XP80297 61 aa5.61□□□□□ -1.51
SGCA-203ENST00000502555 USH2AO75445 5202 aa5.61□□□□□ -1.51
SGCA-203ENST00000502555 KRTAP10-5P60370 271 aa5.6□□□□□ -1.51
SGCA-203ENST00000502555 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.59□□□□□ -1.51
SGCA-203ENST00000502555 C10orf95Q9H7T3 257 aa5.58□□□□□ -1.52
SGCA-203ENST00000502555 KRTAP19-6Q3LI70 58 aa5.56□□□□□ -1.52
SGCA-203ENST00000502555 KRTAP25-1Q3LHN0 102 aa5.48□□□□□ -1.53
SGCA-203ENST00000502555 TNP1P09430 55 aa5.48□□□□□ -1.53
SGCA-203ENST00000502555 SVIPQ8NHG7 77 aa5.47□□□□□ -1.53
SGCA-203ENST00000502555 KTN1-AS1Q86SY8 53 aa5.45□□□□□ -1.54
SGCA-203ENST00000502555 SSPOA2VEC9 5147 aa5.44□□□□□ -1.54
SGCA-203ENST00000502555 KRTAP10-7P60409 375 aaPredicted RBP5.36□□□□□ -1.55
SGCA-203ENST00000502555 FCGBPQ9Y6R7 5405 aaPredicted RBP5.34□□□□□ -1.55
SGCA-203ENST00000502555 KRTAP10-12P60413 245 aa5.34□□□□□ -1.55
SGCA-203ENST00000502555 SYNE2Q8WXH0 6885 aaKnown RBP5.33□□□□□ -1.56
SGCA-203ENST00000502555 PRAC1Q96KF2 57 aa5.32□□□□□ -1.56
SGCA-203ENST00000502555 KRTAP23-1A1A580 65 aa5.31□□□□□ -1.56
SGCA-203ENST00000502555 PP632Q6XCG6 107 aa5.28□□□□□ -1.56
SGCA-203ENST00000502555 MACF1Q9UPN3 7388 aaKnown RBP5.27□□□□□ -1.57
SGCA-203ENST00000502555 LCE3AQ5TA76 89 aa5.23□□□□□ -1.57
SGCA-203ENST00000502555 KRTAP4-8A0A0G2JLE6 195 aa5.16□□□□□ -1.58
SGCA-203ENST00000502555 KRTAP4-8Q9BYQ9 185 aa5.16□□□□□ -1.58
SGCA-203ENST00000502555 KRTAP8-1Q8IUC2 63 aa5.15□□□□□ -1.59
SGCA-203ENST00000502555 KRTAP6-3Q3LI67 103 aa5.06□□□□□ -1.6
SGCA-203ENST00000502555 KRTAP12-3P60328 96 aa5.04□□□□□ -1.6
SGCA-203ENST00000502555 KRTAP19-5Q3LI72 72 aa5.04□□□□□ -1.6
SGCA-203ENST00000502555 NEBP20929 6669 aa5.02□□□□□ -1.61
SGCA-203ENST00000502555 KRTAP19-7Q3SYF9 63 aa5.01□□□□□ -1.61
SGCA-203ENST00000502555 KMT2DO14686 5537 aa4.99□□□□□ -1.61
SGCA-203ENST00000502555 MT1EP04732 61 aa4.95□□□□□ -1.62
SGCA-203ENST00000502555 KRTAP5-9P26371 169 aa4.92□□□□□ -1.62
SGCA-203ENST00000502555 KRTAP15-1Q3LI76 137 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 191 ms