RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 KRTAP4-8Q9BYQ9 185 aa3.56□□□□□ -1.84
USP46-203ENST00000502443 H3BPC8 53 aa3.55□□□□□ -1.84
USP46-203ENST00000502443 C1orf64Q8NEQ6 169 aa3.55□□□□□ -1.84
USP46-203ENST00000502443 NDUFC1O43677 76 aa3.53□□□□□ -1.84
USP46-203ENST00000502443 MT2AP02795 61 aa3.53□□□□□ -1.84
USP46-203ENST00000502443 CYP4F30PQ9H0H9 118 aa3.52□□□□□ -1.85
USP46-203ENST00000502443 LOC101927531A0A1B0GV80 90 aa3.51□□□□□ -1.85
USP46-203ENST00000502443 KRTAP10-10P60014 251 aa3.51□□□□□ -1.85
USP46-203ENST00000502443 TMEM258P61165 79 aa3.51□□□□□ -1.85
USP46-203ENST00000502443 KRTAP9-6A0A140TA67 174 aa3.5□□□□□ -1.85
USP46-203ENST00000502443 MT1FP04733 61 aa3.5□□□□□ -1.85
USP46-203ENST00000502443 KRTAP3-1Q9BYR8 98 aa3.5□□□□□ -1.85
USP46-203ENST00000502443 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.49□□□□□ -1.85
USP46-203ENST00000502443 FSIP2Q5CZC0 6907 aa3.48□□□□□ -1.85
USP46-203ENST00000502443 CRCT1Q9UGL9 99 aa3.48□□□□□ -1.85
USP46-203ENST00000502443 SPANXA2-OT1Q8N9U9 137 aa3.47□□□□□ -1.85
USP46-203ENST00000502443 S4R3F8 94 aa3.47□□□□□ -1.85
USP46-203ENST00000502443 ATP5EP56381 51 aaPredicted RBP3.45□□□□□ -1.86
USP46-203ENST00000502443 LCA10Q71F78 164 aa3.45□□□□□ -1.86
USP46-203ENST00000502443 KRTAP4-12Q9BQ66 201 aa3.45□□□□□ -1.86
USP46-203ENST00000502443 KRTAP9-3Q9BYQ3 159 aa3.45□□□□□ -1.86
USP46-203ENST00000502443 CSAG1Q6PB30 78 aa3.43□□□□□ -1.86
USP46-203ENST00000502443 KRTAP19-1Q8IUB9 90 aa3.42□□□□□ -1.86
USP46-203ENST00000502443 RPS28P62857 69 aaKnown RBP3.41□□□□□ -1.86
USP46-203ENST00000502443 SERP1Q9Y6X1 66 aa3.41□□□□□ -1.86
USP46-203ENST00000502443 A8MUN3 132 aa3.39□□□□□ -1.87
USP46-203ENST00000502443 LCE3BQ5TA77 95 aa3.39□□□□□ -1.87
USP46-203ENST00000502443 DMAC1Q96GE9 116 aa3.39□□□□□ -1.87
USP46-203ENST00000502443 COA5Q86WW8 74 aa3.37□□□□□ -1.87
USP46-203ENST00000502443 USH2AO75445 5202 aa3.35□□□□□ -1.87
USP46-203ENST00000502443 ACYP2P14621 99 aa3.35□□□□□ -1.87
USP46-203ENST00000502443 SMIM26A0A096LP01 95 aa3.33□□□□□ -1.88
USP46-203ENST00000502443 KRTAP9-9Q9BYP9 154 aa3.32□□□□□ -1.88
USP46-203ENST00000502443 KRTAP9-4Q9BYQ2 154 aa3.32□□□□□ -1.88
USP46-203ENST00000502443 H3BS24 57 aa3.31□□□□□ -1.88
USP46-203ENST00000502443 H0YAA0 97 aa3.29□□□□□ -1.88
USP46-203ENST00000502443 SPRR2GQ9BYE4 73 aa3.29□□□□□ -1.88
USP46-203ENST00000502443 SSPOA2VEC9 5147 aa3.29□□□□□ -1.88
USP46-203ENST00000502443 CHKB-CPT1BH3BT56 60 aa3.28□□□□□ -1.88
USP46-203ENST00000502443 ADM2Q7Z4H4 148 aa3.28□□□□□ -1.88
USP46-203ENST00000502443 KRTAP19-6Q3LI70 58 aa3.27□□□□□ -1.89
USP46-203ENST00000502443 CRIPTQ9P021 101 aa3.27□□□□□ -1.89
USP46-203ENST00000502443 Q1T7F1 81 aa3.26□□□□□ -1.89
USP46-203ENST00000502443 Q5VV11 94 aa3.26□□□□□ -1.89
USP46-203ENST00000502443 KRTAP4-8A0A0G2JLE6 195 aa3.25□□□□□ -1.89
USP46-203ENST00000502443 MT1BP07438 61 aa3.24□□□□□ -1.89
USP46-203ENST00000502443 KRTAP19-8Q3LI54 63 aa3.24□□□□□ -1.89
USP46-203ENST00000502443 LINC01558Q9Y6Z2 57 aa3.24□□□□□ -1.89
USP46-203ENST00000502443 FCGBPQ9Y6R7 5405 aaPredicted RBP3.23□□□□□ -1.89
USP46-203ENST00000502443 SPTSSBQ8NFR3 76 aa3.22□□□□□ -1.89
USP46-203ENST00000502443 V9GYY9 64 aa3.22□□□□□ -1.89
USP46-203ENST00000502443 P0C880 135 aa3.21□□□□□ -1.9
USP46-203ENST00000502443 PSPHP1O15172 72 aa3.2□□□□□ -1.9
USP46-203ENST00000502443 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
USP46-203ENST00000502443 PRR15LQ9BU68 103 aa3.19□□□□□ -1.9
USP46-203ENST00000502443 R4GN34 69 aa3.19□□□□□ -1.9
USP46-203ENST00000502443 A6NN06 94 aa3.18□□□□□ -1.9
USP46-203ENST00000502443 KRTAP9-7A8MTY7 169 aa3.17□□□□□ -1.9
USP46-203ENST00000502443 M0QZ58 72 aa3.17□□□□□ -1.9
USP46-203ENST00000502443 LCE1DQ5T752 114 aa3.17□□□□□ -1.9
USP46-203ENST00000502443 A0A1B0GU69 56 aa3.15□□□□□ -1.91
USP46-203ENST00000502443 KRTAP19-4Q3LI73 84 aa3.15□□□□□ -1.91
USP46-203ENST00000502443 KRTAP10-5P60370 271 aa3.14□□□□□ -1.91
USP46-203ENST00000502443 LINC01554Q52M75 96 aa3.13□□□□□ -1.91
USP46-203ENST00000502443 PLAC4Q8WY50 150 aa3.13□□□□□ -1.91
USP46-203ENST00000502443 KRTAP4-7Q9BYR0 210 aa3.13□□□□□ -1.91
USP46-203ENST00000502443 MACF1Q9UPN3 7388 aaKnown RBP3.13□□□□□ -1.91
USP46-203ENST00000502443 SEC61GP60059 68 aa3.11□□□□□ -1.91
USP46-203ENST00000502443 A0A1B0GU33 70 aa3.08□□□□□ -1.92
USP46-203ENST00000502443 A6NED7 52 aa3.08□□□□□ -1.92
USP46-203ENST00000502443 KRTAP4-9Q9BYQ8 210 aa3.08□□□□□ -1.92
USP46-203ENST00000502443 PRO2289Q9P1D8 64 aa3.08□□□□□ -1.92
USP46-203ENST00000502443 A8MU10 97 aa3.07□□□□□ -1.92
USP46-203ENST00000502443 SVIPQ8NHG7 77 aa3.07□□□□□ -1.92
USP46-203ENST00000502443 UQCR11O14957 56 aa3.06□□□□□ -1.92
USP46-203ENST00000502443 MT1XP80297 61 aa3.06□□□□□ -1.92
USP46-203ENST00000502443 SPATA8Q6RVD6 105 aa3.06□□□□□ -1.92
USP46-203ENST00000502443 SYNE2Q8WXH0 6885 aaKnown RBP3.06□□□□□ -1.92
USP46-203ENST00000502443 KRTAP6-3Q3LI67 103 aa3.05□□□□□ -1.92
USP46-203ENST00000502443 KRTAP13-4Q3LI77 160 aa3.05□□□□□ -1.92
USP46-203ENST00000502443 BRK1Q8WUW1 75 aa3.04□□□□□ -1.92
USP46-203ENST00000502443 CDC42SE1Q9NRR8 79 aa3.04□□□□□ -1.92
USP46-203ENST00000502443 MIR22HGQ0VDD5 57 aa3.03□□□□□ -1.92
USP46-203ENST00000502443 KRTAP4-2Q9BYR5 136 aa3□□□□□ -1.93
USP46-203ENST00000502443 PRO0628Q9UI54 55 aa2.99□□□□□ -1.93
USP46-203ENST00000502443 LCE5AQ5TCM9 118 aa2.98□□□□□ -1.93
USP46-203ENST00000502443 KRTAP4-11Q9BYQ6 195 aa2.98□□□□□ -1.93
USP46-203ENST00000502443 A0A0D9SG42 100 aa2.97□□□□□ -1.93
USP46-203ENST00000502443 KRTAP12-2P59991 146 aa2.96□□□□□ -1.94
USP46-203ENST00000502443 CAMK2N1Q7Z7J9 78 aa2.95□□□□□ -1.94
USP46-203ENST00000502443 KRTAP5-9P26371 169 aa2.94□□□□□ -1.94
USP46-203ENST00000502443 KRTAP10-7P60409 375 aaPredicted RBP2.93□□□□□ -1.94
USP46-203ENST00000502443 SPINT4Q6UDR6 99 aa2.93□□□□□ -1.94
USP46-203ENST00000502443 KRTAP12-1P59990 96 aa2.92□□□□□ -1.94
USP46-203ENST00000502443 KRTAP8-1Q8IUC2 63 aa2.92□□□□□ -1.94
USP46-203ENST00000502443 KMT2DO14686 5537 aa2.91□□□□□ -1.94
USP46-203ENST00000502443 KRTAP10-12P60413 245 aa2.9□□□□□ -1.95
USP46-203ENST00000502443 SPRR2FQ96RM1 72 aa2.9□□□□□ -1.95
USP46-203ENST00000502443 PMAIP1Q13794 54 aa2.89□□□□□ -1.95
USP46-203ENST00000502443 MUC12Q9UKN1 5478 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms