RNA–Protein interactions for RNA: ENST00000502187.5

LINC01550-202, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,455 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-202ENST00000502187 CYP4F30PQ9H0H9 118 aa4.78□□□□□ -1.64
LINC01550-202ENST00000502187 H7BZZ5 65 aa4.77□□□□□ -1.65
LINC01550-202ENST00000502187 PCOTHQ58A44 107 aa4.77□□□□□ -1.65
LINC01550-202ENST00000502187 KTN1-AS1Q86SY8 53 aa4.76□□□□□ -1.65
LINC01550-202ENST00000502187 SPINK7P58062 85 aa4.74□□□□□ -1.65
LINC01550-202ENST00000502187 TMEM258P61165 79 aa4.73□□□□□ -1.65
LINC01550-202ENST00000502187 MUC17Q685J3 4493 aa4.72□□□□□ -1.65
LINC01550-202ENST00000502187 LCA10Q71F78 164 aa4.71□□□□□ -1.65
LINC01550-202ENST00000502187 HRES1P13985 223 aa4.71□□□□□ -1.66
LINC01550-202ENST00000502187 SPANXA2-OT1Q8N9U9 137 aa4.7□□□□□ -1.66
LINC01550-202ENST00000502187 KRTAP19-4Q3LI73 84 aa4.7□□□□□ -1.66
LINC01550-202ENST00000502187 ATP5EP56381 51 aaPredicted RBP4.69□□□□□ -1.66
LINC01550-202ENST00000502187 UBR4Q5T4S7 5183 aa4.66□□□□□ -1.66
LINC01550-202ENST00000502187 BRK1Q8WUW1 75 aa4.66□□□□□ -1.66
LINC01550-202ENST00000502187 A6NED7 52 aa4.66□□□□□ -1.66
LINC01550-202ENST00000502187 NDUFAF8A1L188 74 aa4.65□□□□□ -1.67
LINC01550-202ENST00000502187 KRTAP4-1Q9BYQ7 146 aa4.63□□□□□ -1.67
LINC01550-202ENST00000502187 LINC01554Q52M75 96 aa4.63□□□□□ -1.67
LINC01550-202ENST00000502187 DMAC1Q96GE9 116 aa4.63□□□□□ -1.67
LINC01550-202ENST00000502187 COX6B2Q6YFQ2 88 aa4.62□□□□□ -1.67
LINC01550-202ENST00000502187 MUC2Q02817 5179 aa4.62□□□□□ -1.67
LINC01550-202ENST00000502187 K7ERS5 55 aa4.61□□□□□ -1.67
LINC01550-202ENST00000502187 ACYP2P14621 99 aa4.6□□□□□ -1.67
LINC01550-202ENST00000502187 RNF213Q63HN8 5207 aa4.58□□□□□ -1.68
LINC01550-202ENST00000502187 SERP1Q9Y6X1 66 aa4.58□□□□□ -1.68
LINC01550-202ENST00000502187 COA5Q86WW8 74 aa4.56□□□□□ -1.68
LINC01550-202ENST00000502187 CHKB-CPT1BH3BT56 60 aa4.54□□□□□ -1.68
LINC01550-202ENST00000502187 H1FX-AS1Q4G0G2 97 aa4.52□□□□□ -1.69
LINC01550-202ENST00000502187 S4R3F8 94 aa4.49□□□□□ -1.69
LINC01550-202ENST00000502187 LOC100996750A0A140TA64 210 aa4.47□□□□□ -1.69
LINC01550-202ENST00000502187 KRTAP19-2Q3LHN2 52 aa4.47□□□□□ -1.69
LINC01550-202ENST00000502187 KRTAP4-6Q9BYQ5 205 aa4.47□□□□□ -1.69
LINC01550-202ENST00000502187 SPTSSBQ8NFR3 76 aa4.46□□□□□ -1.7
LINC01550-202ENST00000502187 FAT4Q6V0I7 4981 aa4.42□□□□□ -1.7
LINC01550-202ENST00000502187 FLGP20930 4061 aaPredicted RBP4.4□□□□□ -1.7
LINC01550-202ENST00000502187 KRTAP9-4Q9BYQ2 154 aa4.39□□□□□ -1.71
LINC01550-202ENST00000502187 CSAG1Q6PB30 78 aa4.39□□□□□ -1.71
LINC01550-202ENST00000502187 Q1T7F1 81 aa4.36□□□□□ -1.71
LINC01550-202ENST00000502187 LCE5AQ5TCM9 118 aa4.36□□□□□ -1.71
LINC01550-202ENST00000502187 LINC01558Q9Y6Z2 57 aa4.36□□□□□ -1.71
LINC01550-202ENST00000502187 M0R2T5 61 aa4.35□□□□□ -1.71
LINC01550-202ENST00000502187 MT1HP80294 61 aa4.35□□□□□ -1.71
LINC01550-202ENST00000502187 A0A1B0GU69 56 aa4.33□□□□□ -1.72
LINC01550-202ENST00000502187 PRR15LQ9BU68 103 aa4.32□□□□□ -1.72
LINC01550-202ENST00000502187 KRTAP9-6A0A140TA67 174 aa4.28□□□□□ -1.72
LINC01550-202ENST00000502187 KRTAP9-7A8MTY7 169 aa4.28□□□□□ -1.72
LINC01550-202ENST00000502187 H0YAA0 97 aa4.28□□□□□ -1.72
LINC01550-202ENST00000502187 Q5VV11 94 aa4.26□□□□□ -1.73
LINC01550-202ENST00000502187 KRTAP9-9Q9BYP9 154 aa4.26□□□□□ -1.73
LINC01550-202ENST00000502187 KRTAP25-1Q3LHN0 102 aa4.24□□□□□ -1.73
LINC01550-202ENST00000502187 KRTAP10-6P60371 365 aaPredicted RBP4.24□□□□□ -1.73
LINC01550-202ENST00000502187 LCE4AQ5TA78 99 aa4.23□□□□□ -1.73
LINC01550-202ENST00000502187 P0C880 135 aa4.23□□□□□ -1.73
LINC01550-202ENST00000502187 A6NN06 94 aa4.22□□□□□ -1.73
LINC01550-202ENST00000502187 ROMO1P60602 79 aa4.22□□□□□ -1.73
LINC01550-202ENST00000502187 A0A1B0GU33 70 aa4.2□□□□□ -1.74
LINC01550-202ENST00000502187 UQCR11O14957 56 aa4.18□□□□□ -1.74
LINC01550-202ENST00000502187 KRTAP9-8Q9BYQ0 159 aa4.16□□□□□ -1.74
LINC01550-202ENST00000502187 MT2AP02795 61 aa4.15□□□□□ -1.75
LINC01550-202ENST00000502187 KRTAP10-10P60014 251 aa4.14□□□□□ -1.75
LINC01550-202ENST00000502187 R4GN34 69 aa4.14□□□□□ -1.75
LINC01550-202ENST00000502187 SPATA8Q6RVD6 105 aa4.13□□□□□ -1.75
LINC01550-202ENST00000502187 M0QZ58 72 aa4.13□□□□□ -1.75
LINC01550-202ENST00000502187 MIR22HGQ0VDD5 57 aa4.13□□□□□ -1.75
LINC01550-202ENST00000502187 MT1FP04733 61 aa4.12□□□□□ -1.75
LINC01550-202ENST00000502187 KRTAP13-4Q3LI77 160 aa4.12□□□□□ -1.75
LINC01550-202ENST00000502187 CRIPTQ9P021 101 aa4.12□□□□□ -1.75
LINC01550-202ENST00000502187 CDC42SE1Q9NRR8 79 aa4.09□□□□□ -1.75
LINC01550-202ENST00000502187 A0A0D9SG42 100 aa4.06□□□□□ -1.76
LINC01550-202ENST00000502187 A8MU10 97 aa4.06□□□□□ -1.76
LINC01550-202ENST00000502187 KRTAP4-8Q9BYQ9 185 aa4.05□□□□□ -1.76
LINC01550-202ENST00000502187 SPINT4Q6UDR6 99 aa4.03□□□□□ -1.76
LINC01550-202ENST00000502187 SPRR2GQ9BYE4 73 aa4.03□□□□□ -1.76
LINC01550-202ENST00000502187 KRTAP19-1Q8IUB9 90 aa4.02□□□□□ -1.77
LINC01550-202ENST00000502187 KRTAP9-3Q9BYQ3 159 aa4.01□□□□□ -1.77
LINC01550-202ENST00000502187 GPR98Q8WXG9 6306 aa3.99□□□□□ -1.77
LINC01550-202ENST00000502187 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.97□□□□□ -1.77
LINC01550-202ENST00000502187 KRTAP12-1P59990 96 aa3.97□□□□□ -1.77
LINC01550-202ENST00000502187 KRTAP9-2Q9BYQ4 174 aa3.97□□□□□ -1.77
LINC01550-202ENST00000502187 KRTAP12-2P59991 146 aa3.95□□□□□ -1.78
LINC01550-202ENST00000502187 KRTAP19-8Q3LI54 63 aa3.94□□□□□ -1.78
LINC01550-202ENST00000502187 PLAC4Q8WY50 150 aa3.92□□□□□ -1.78
LINC01550-202ENST00000502187 PRO2289Q9P1D8 64 aa3.9□□□□□ -1.78
LINC01550-202ENST00000502187 FSIP2Q5CZC0 6907 aa3.89□□□□□ -1.79
LINC01550-202ENST00000502187 MT1BP07438 61 aa3.88□□□□□ -1.79
LINC01550-202ENST00000502187 USH2AO75445 5202 aa3.86□□□□□ -1.79
LINC01550-202ENST00000502187 LCE1AQ5T7P2 110 aa3.84□□□□□ -1.79
LINC01550-202ENST00000502187 LCE3BQ5TA77 95 aa3.84□□□□□ -1.8
LINC01550-202ENST00000502187 KRTAP4-12Q9BQ66 201 aa3.83□□□□□ -1.8
LINC01550-202ENST00000502187 LCE1FQ5T754 118 aa3.8□□□□□ -1.8
LINC01550-202ENST00000502187 SSPOA2VEC9 5147 aa3.76□□□□□ -1.81
LINC01550-202ENST00000502187 C10orf95Q9H7T3 257 aa3.75□□□□□ -1.81
LINC01550-202ENST00000502187 KRTAP4-8A0A0G2JLE6 195 aa3.75□□□□□ -1.81
LINC01550-202ENST00000502187 MT1XP80297 61 aa3.75□□□□□ -1.81
LINC01550-202ENST00000502187 KRTAP10-5P60370 271 aa3.73□□□□□ -1.81
LINC01550-202ENST00000502187 CRCT1Q9UGL9 99 aa3.73□□□□□ -1.81
LINC01550-202ENST00000502187 MT3P25713 68 aa3.72□□□□□ -1.81
LINC01550-202ENST00000502187 KRTAP19-6Q3LI70 58 aa3.71□□□□□ -1.82
LINC01550-202ENST00000502187 TNP1P09430 55 aa3.67□□□□□ -1.82
LINC01550-202ENST00000502187 KRTAP2-2Q9BYT5 123 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms