RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 SPAG11AQ6PDA7 123 aa3.07□□□□□ -1.92
HMGXB4-208ENST00000498325 BRK1Q8WUW1 75 aa3.07□□□□□ -1.92
HMGXB4-208ENST00000498325 LIMD2Q9BT23 127 aa3.07□□□□□ -1.92
HMGXB4-208ENST00000498325 CYP4F30PQ9H0H9 118 aa3.07□□□□□ -1.92
HMGXB4-208ENST00000498325 hDV103S1A0JD37 113 aa3.06□□□□□ -1.92
HMGXB4-208ENST00000498325 H3BPC8 53 aa3.06□□□□□ -1.92
HMGXB4-208ENST00000498325 SPINK1P00995 79 aa3.06□□□□□ -1.92
HMGXB4-208ENST00000498325 DSCR10P59022 87 aa3.06□□□□□ -1.92
HMGXB4-208ENST00000498325 DEFB116Q30KQ4 102 aa3.06□□□□□ -1.92
HMGXB4-208ENST00000498325 PRR15Q8IV56 129 aa3.06□□□□□ -1.92
HMGXB4-208ENST00000498325 ZCCHC13Q8WW36 166 aaKnown RBP3.06□□□□□ -1.92
HMGXB4-208ENST00000498325 A8MWP4 228 aa3.05□□□□□ -1.92
HMGXB4-208ENST00000498325 KRTAP13-3Q3SY46 172 aa3.05□□□□□ -1.92
HMGXB4-208ENST00000498325 Q8N9L7 120 aa3.05□□□□□ -1.92
HMGXB4-208ENST00000498325 K7EQZ3 153 aa3.04□□□□□ -1.92
HMGXB4-208ENST00000498325 RPS29P62273 56 aaKnown RBP3.04□□□□□ -1.92
HMGXB4-208ENST00000498325 LINC00304Q8N9R0 145 aa3.04□□□□□ -1.92
HMGXB4-208ENST00000498325 Q96NJ1 140 aa3.04□□□□□ -1.92
HMGXB4-208ENST00000498325 HCG22E2RYF7 251 aa3.03□□□□□ -1.92
HMGXB4-208ENST00000498325 MP68P56378 58 aa3.03□□□□□ -1.92
HMGXB4-208ENST00000498325 SPANXA2-OT1Q8N9U9 137 aa3.03□□□□□ -1.92
HMGXB4-208ENST00000498325 SYNE2Q8WXH0 6885 aaKnown RBP3.02□□□□□ -1.93
HMGXB4-208ENST00000498325 A0A1B0GVX0 72 aa3.02□□□□□ -1.93
HMGXB4-208ENST00000498325 KRTAP10-8P60410 259 aa3.02□□□□□ -1.93
HMGXB4-208ENST00000498325 C1orf64Q8NEQ6 169 aa3.02□□□□□ -1.93
HMGXB4-208ENST00000498325 IGHV6-1A0A0B4J1U7 121 aa3.01□□□□□ -1.93
HMGXB4-208ENST00000498325 C8orf87E5RJ46 101 aa3.01□□□□□ -1.93
HMGXB4-208ENST00000498325 CASC2Q6XLA1 102 aa3.01□□□□□ -1.93
HMGXB4-208ENST00000498325 SEC61GP60059 68 aa3□□□□□ -1.93
HMGXB4-208ENST00000498325 PMAIP1Q13794 54 aa3□□□□□ -1.93
HMGXB4-208ENST00000498325 WFDC13Q8IUB5 93 aa3□□□□□ -1.93
HMGXB4-208ENST00000498325 C8orf17Q9NRJ1 99 aa3□□□□□ -1.93
HMGXB4-208ENST00000498325 TRAV22A0A0B4J277 110 aa2.99□□□□□ -1.93
HMGXB4-208ENST00000498325 MMP24-AS1A0A0U1RRL7 71 aa2.99□□□□□ -1.93
HMGXB4-208ENST00000498325 LINC00313P59037 77 aa2.98□□□□□ -1.93
HMGXB4-208ENST00000498325 MRPL34Q9BQ48 92 aaKnown RBP2.98□□□□□ -1.93
HMGXB4-208ENST00000498325 TP53AIP1Q9HCN2 124 aa2.98□□□□□ -1.93
HMGXB4-208ENST00000498325 LINC00208Q96KT6 92 aa2.97□□□□□ -1.93
HMGXB4-208ENST00000498325 H0Y9P7 68 aa2.96□□□□□ -1.94
HMGXB4-208ENST00000498325 NDUFS5O43920 106 aa2.96□□□□□ -1.94
HMGXB4-208ENST00000498325 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
HMGXB4-208ENST00000498325 LOC101927531A0A1B0GV80 90 aa2.95□□□□□ -1.94
HMGXB4-208ENST00000498325 A8MUN3 132 aa2.94□□□□□ -1.94
HMGXB4-208ENST00000498325 PSPHP1O15172 72 aa2.94□□□□□ -1.94
HMGXB4-208ENST00000498325 Q5VV11 94 aa2.94□□□□□ -1.94
HMGXB4-208ENST00000498325 ATP11AUNQ6ZP68 121 aa2.94□□□□□ -1.94
HMGXB4-208ENST00000498325 NOTCH2NLQ7Z3S9 236 aa2.94□□□□□ -1.94
HMGXB4-208ENST00000498325 MACF1Q9UPN3 7388 aaKnown RBP2.93□□□□□ -1.94
HMGXB4-208ENST00000498325 IGLV7-46A0A075B6I9 117 aa2.93□□□□□ -1.94
HMGXB4-208ENST00000498325 CHKB-CPT1BH3BT56 60 aa2.93□□□□□ -1.94
HMGXB4-208ENST00000498325 KRTAP16-1A8MUX0 517 aa2.91□□□□□ -1.94
HMGXB4-208ENST00000498325 PRR4Q16378 134 aa2.91□□□□□ -1.94
HMGXB4-208ENST00000498325 KTN1-AS1Q86SY8 53 aa2.91□□□□□ -1.94
HMGXB4-208ENST00000498325 RETNLBQ9BQ08 111 aa2.91□□□□□ -1.94
HMGXB4-208ENST00000498325 PRR15LQ9BU68 103 aa2.91□□□□□ -1.94
HMGXB4-208ENST00000498325 LINC01558Q9Y6Z2 57 aa2.91□□□□□ -1.94
HMGXB4-208ENST00000498325 COA5Q86WW8 74 aa2.9□□□□□ -1.95
HMGXB4-208ENST00000498325 CDC42SE1Q9NRR8 79 aa2.9□□□□□ -1.95
HMGXB4-208ENST00000498325 A6NED7 52 aa2.89□□□□□ -1.95
HMGXB4-208ENST00000498325 C9orf92A6NGG3 77 aa2.89□□□□□ -1.95
HMGXB4-208ENST00000498325 KRTAP12-2P59991 146 aa2.89□□□□□ -1.95
HMGXB4-208ENST00000498325 KRTAP5-5Q701N2 237 aaPredicted RBP2.89□□□□□ -1.95
HMGXB4-208ENST00000498325 SSPOA2VEC9 5147 aa2.89□□□□□ -1.95
HMGXB4-208ENST00000498325 NEBP20929 6669 aa2.88□□□□□ -1.95
HMGXB4-208ENST00000498325 MUC17Q685J3 4493 aa2.87□□□□□ -1.95
HMGXB4-208ENST00000498325 USH2AO75445 5202 aa2.87□□□□□ -1.95
HMGXB4-208ENST00000498325 A8MUU9 505 aa2.87□□□□□ -1.95
HMGXB4-208ENST00000498325 Q5W150 140 aa2.87□□□□□ -1.95
HMGXB4-208ENST00000498325 C20orf166-AS1Q96NR2 134 aa2.87□□□□□ -1.95
HMGXB4-208ENST00000498325 A6NN06 94 aa2.86□□□□□ -1.95
HMGXB4-208ENST00000498325 C7orf65Q6ZTY9 151 aa2.86□□□□□ -1.95
HMGXB4-208ENST00000498325 LCA10Q71F78 164 aa2.86□□□□□ -1.95
HMGXB4-208ENST00000498325 FCGBPQ9Y6R7 5405 aaPredicted RBP2.86□□□□□ -1.95
HMGXB4-208ENST00000498325 SPTSSBQ8NFR3 76 aa2.85□□□□□ -1.95
HMGXB4-208ENST00000498325 PRAC1Q96KF2 57 aa2.85□□□□□ -1.95
HMGXB4-208ENST00000498325 TPRXLQ17RH7 258 aa2.83□□□□□ -1.96
HMGXB4-208ENST00000498325 PCOTHQ58A44 107 aa2.83□□□□□ -1.96
HMGXB4-208ENST00000498325 RBM12B-AS1Q9P1G2 102 aa2.83□□□□□ -1.96
HMGXB4-208ENST00000498325 HRES1P13985 223 aa2.82□□□□□ -1.96
HMGXB4-208ENST00000498325 ACYP2P14621 99 aa2.82□□□□□ -1.96
HMGXB4-208ENST00000498325 RPL37P61927 97 aaKnown RBP2.82□□□□□ -1.96
HMGXB4-208ENST00000498325 A8MU10 97 aa2.8□□□□□ -1.96
HMGXB4-208ENST00000498325 DMAC1Q96GE9 116 aa2.79□□□□□ -1.96
HMGXB4-208ENST00000498325 SPINK7P58062 85 aa2.78□□□□□ -1.96
HMGXB4-208ENST00000498325 LCE1CQ5T751 118 aa2.78□□□□□ -1.96
HMGXB4-208ENST00000498325 LCE1BQ5T7P3 118 aa2.78□□□□□ -1.96
HMGXB4-208ENST00000498325 A0A1B0GU69 56 aa2.76□□□□□ -1.97
HMGXB4-208ENST00000498325 SPATA8Q6RVD6 105 aa2.76□□□□□ -1.97
HMGXB4-208ENST00000498325 NDUFAF8A1L188 74 aa2.75□□□□□ -1.97
HMGXB4-208ENST00000498325 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
HMGXB4-208ENST00000498325 UQCR11O14957 56 aa2.74□□□□□ -1.97
HMGXB4-208ENST00000498325 COX6B2Q6YFQ2 88 aa2.73□□□□□ -1.97
HMGXB4-208ENST00000498325 KRTAP4-1Q9BYQ7 146 aa2.73□□□□□ -1.97
HMGXB4-208ENST00000498325 MIR22HGQ0VDD5 57 aa2.72□□□□□ -1.97
HMGXB4-208ENST00000498325 MT1HP80294 61 aa2.71□□□□□ -1.98
HMGXB4-208ENST00000498325 LINC01554Q52M75 96 aa2.71□□□□□ -1.98
HMGXB4-208ENST00000498325 GPR98Q8WXG9 6306 aa2.68□□□□□ -1.98
HMGXB4-208ENST00000498325 KRTAP20-1Q3LI63 56 aa2.68□□□□□ -1.98
HMGXB4-208ENST00000498325 MUC12Q9UKN1 5478 aa2.67□□□□□ -1.98
HMGXB4-208ENST00000498325 KRTAP19-2Q3LHN2 52 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms