RNA–Protein interactions for RNA: ENST00000497448.1

TOM1-217, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-217ENST00000497448 KRTAP5-9P26371 169 aa5□□□□□ -1.61
TOM1-217ENST00000497448 KRTAP2-4Q9BYR9 128 aa5□□□□□ -1.61
TOM1-217ENST00000497448 CYSTM1Q9H1C7 97 aa5□□□□□ -1.61
TOM1-217ENST00000497448 SMIM20Q8N5G0 67 aa4.99□□□□□ -1.61
TOM1-217ENST00000497448 ZCCHC13Q8WW36 166 aaKnown RBP4.99□□□□□ -1.61
TOM1-217ENST00000497448 TP53AIP1Q9HCN2 124 aa4.99□□□□□ -1.61
TOM1-217ENST00000497448 PCP4P48539 62 aa4.98□□□□□ -1.61
TOM1-217ENST00000497448 SNURFQ9Y675 71 aa4.98□□□□□ -1.61
TOM1-217ENST00000497448 TRAV22A0A0B4J277 110 aa4.96□□□□□ -1.62
TOM1-217ENST00000497448 C20orf197Q8N268 126 aa4.96□□□□□ -1.62
TOM1-217ENST00000497448 LINC00208Q96KT6 92 aa4.96□□□□□ -1.62
TOM1-217ENST00000497448 C5orf47Q569G3 176 aa4.95□□□□□ -1.62
TOM1-217ENST00000497448 C1orf64Q8NEQ6 169 aa4.94□□□□□ -1.62
TOM1-217ENST00000497448 A6NN06 94 aa4.93□□□□□ -1.62
TOM1-217ENST00000497448 KLKP1Q107X0 134 aa4.93□□□□□ -1.62
TOM1-217ENST00000497448 IGKV2D-30A0A075B6S6 120 aa4.92□□□□□ -1.62
TOM1-217ENST00000497448 IGKV2-30P06310 120 aa4.92□□□□□ -1.62
TOM1-217ENST00000497448 MP68P56378 58 aa4.92□□□□□ -1.62
TOM1-217ENST00000497448 CYP4F30PQ9H0H9 118 aa4.9□□□□□ -1.63
TOM1-217ENST00000497448 SPINK7P58062 85 aa4.88□□□□□ -1.63
TOM1-217ENST00000497448 LOC101927531A0A1B0GV80 90 aa4.87□□□□□ -1.63
TOM1-217ENST00000497448 H3BPC8 53 aa4.87□□□□□ -1.63
TOM1-217ENST00000497448 H7BZZ5 65 aa4.86□□□□□ -1.63
TOM1-217ENST00000497448 C7orf65Q6ZTY9 151 aa4.84□□□□□ -1.63
TOM1-217ENST00000497448 GPR98Q8WXG9 6306 aa4.82□□□□□ -1.64
TOM1-217ENST00000497448 MT1BP07438 61 aa4.81□□□□□ -1.64
TOM1-217ENST00000497448 C4orf26Q17RF5 130 aa4.81□□□□□ -1.64
TOM1-217ENST00000497448 KRTAP2-2Q9BYT5 123 aa4.81□□□□□ -1.64
TOM1-217ENST00000497448 KRTAP2-1Q9BYU5 128 aa4.81□□□□□ -1.64
TOM1-217ENST00000497448 KRTAP3-1Q9BYR8 98 aa4.8□□□□□ -1.64
TOM1-217ENST00000497448 KRTAP10-5P60370 271 aa4.79□□□□□ -1.64
TOM1-217ENST00000497448 SPRR2EP22531 72 aa4.78□□□□□ -1.64
TOM1-217ENST00000497448 SPRR2BP35325 72 aa4.78□□□□□ -1.64
TOM1-217ENST00000497448 SPRR2AP35326 72 aa4.78□□□□□ -1.64
TOM1-217ENST00000497448 NDUFC1O43677 76 aa4.77□□□□□ -1.65
TOM1-217ENST00000497448 TMEM258P61165 79 aa4.73□□□□□ -1.65
TOM1-217ENST00000497448 Q5VV11 94 aa4.73□□□□□ -1.65
TOM1-217ENST00000497448 SPANXA2-OT1Q8N9U9 137 aa4.73□□□□□ -1.65
TOM1-217ENST00000497448 SPRR2FQ96RM1 72 aa4.72□□□□□ -1.65
TOM1-217ENST00000497448 DMAC1Q96GE9 116 aa4.71□□□□□ -1.66
TOM1-217ENST00000497448 KRTAP19-8Q3LI54 63 aa4.69□□□□□ -1.66
TOM1-217ENST00000497448 ATP5EP56381 51 aaPredicted RBP4.65□□□□□ -1.67
TOM1-217ENST00000497448 LCE1AQ5T7P2 110 aa4.65□□□□□ -1.67
TOM1-217ENST00000497448 COA5Q86WW8 74 aa4.65□□□□□ -1.67
TOM1-217ENST00000497448 H1FX-AS1Q4G0G2 97 aa4.64□□□□□ -1.67
TOM1-217ENST00000497448 ACYP2P14621 99 aa4.63□□□□□ -1.67
TOM1-217ENST00000497448 SPRR2DP22532 72 aa4.63□□□□□ -1.67
TOM1-217ENST00000497448 SPRR2GQ9BYE4 73 aa4.63□□□□□ -1.67
TOM1-217ENST00000497448 A8MUN3 132 aa4.62□□□□□ -1.67
TOM1-217ENST00000497448 KRTAP3-3Q9BYR6 98 aa4.62□□□□□ -1.67
TOM1-217ENST00000497448 LCA10Q71F78 164 aa4.6□□□□□ -1.67
TOM1-217ENST00000497448 SERP1Q9Y6X1 66 aa4.6□□□□□ -1.67
TOM1-217ENST00000497448 S4R3F8 94 aa4.59□□□□□ -1.67
TOM1-217ENST00000497448 CHKB-CPT1BH3BT56 60 aa4.55□□□□□ -1.68
TOM1-217ENST00000497448 LCE3BQ5TA77 95 aa4.54□□□□□ -1.68
TOM1-217ENST00000497448 RPS28P62857 69 aaKnown RBP4.53□□□□□ -1.68
TOM1-217ENST00000497448 KRTAP8-1Q8IUC2 63 aa4.53□□□□□ -1.68
TOM1-217ENST00000497448 DSTQ03001 7570 aaKnown RBP4.49□□□□□ -1.69
TOM1-217ENST00000497448 CSAG1Q6PB30 78 aa4.46□□□□□ -1.7
TOM1-217ENST00000497448 SMIM26A0A096LP01 95 aa4.45□□□□□ -1.7
TOM1-217ENST00000497448 KRTAP3-2Q9BYR7 98 aa4.44□□□□□ -1.7
TOM1-217ENST00000497448 SPTSSBQ8NFR3 76 aa4.43□□□□□ -1.7
TOM1-217ENST00000497448 LINC01558Q9Y6Z2 57 aa4.42□□□□□ -1.7
TOM1-217ENST00000497448 P0C880 135 aa4.4□□□□□ -1.71
TOM1-217ENST00000497448 Q1T7F1 81 aa4.4□□□□□ -1.71
TOM1-217ENST00000497448 ADM2Q7Z4H4 148 aa4.4□□□□□ -1.71
TOM1-217ENST00000497448 PSPHP1O15172 72 aa4.38□□□□□ -1.71
TOM1-217ENST00000497448 MT1XP80297 61 aa4.38□□□□□ -1.71
TOM1-217ENST00000497448 PRR15LQ9BU68 103 aa4.38□□□□□ -1.71
TOM1-217ENST00000497448 KRTAP4-9Q9BYQ8 210 aa4.37□□□□□ -1.71
TOM1-217ENST00000497448 KRTAP4-8A0A0G2JLE6 195 aa4.36□□□□□ -1.71
TOM1-217ENST00000497448 KRTAP12-2P59991 146 aa4.36□□□□□ -1.71
TOM1-217ENST00000497448 KRTAP4-8Q9BYQ9 185 aa4.36□□□□□ -1.71
TOM1-217ENST00000497448 PRO2289Q9P1D8 64 aa4.36□□□□□ -1.71
TOM1-217ENST00000497448 A0A1B0GU69 56 aa4.35□□□□□ -1.71
TOM1-217ENST00000497448 H0YAA0 97 aa4.34□□□□□ -1.71
TOM1-217ENST00000497448 CRIPTQ9P021 101 aa4.32□□□□□ -1.72
TOM1-217ENST00000497448 V9GYY9 64 aa4.32□□□□□ -1.72
TOM1-217ENST00000497448 KRTAP13-4Q3LI77 160 aa4.31□□□□□ -1.72
TOM1-217ENST00000497448 SEC61GP60059 68 aa4.29□□□□□ -1.72
TOM1-217ENST00000497448 AHNAK2Q8IVF2 5795 aa4.27□□□□□ -1.73
TOM1-217ENST00000497448 A0A1B0GU33 70 aa4.26□□□□□ -1.73
TOM1-217ENST00000497448 SPATA8Q6RVD6 105 aa4.26□□□□□ -1.73
TOM1-217ENST00000497448 HMCN1Q96RW7 5635 aa4.26□□□□□ -1.73
TOM1-217ENST00000497448 A8MU10 97 aa4.22□□□□□ -1.73
TOM1-217ENST00000497448 M0QZ58 72 aa4.22□□□□□ -1.73
TOM1-217ENST00000497448 LCE1DQ5T752 114 aa4.22□□□□□ -1.73
TOM1-217ENST00000497448 A6NED7 52 aa4.19□□□□□ -1.74
TOM1-217ENST00000497448 KRTAP5-10Q6L8G5 202 aa4.19□□□□□ -1.74
TOM1-217ENST00000497448 R4GN34 69 aa4.18□□□□□ -1.74
TOM1-217ENST00000497448 A0A0D9SG42 100 aa4.17□□□□□ -1.74
TOM1-217ENST00000497448 UQCR11O14957 56 aa4.17□□□□□ -1.74
TOM1-217ENST00000497448 KRTAP10-7P60409 375 aaPredicted RBP4.17□□□□□ -1.74
TOM1-217ENST00000497448 PLAC4Q8WY50 150 aa4.17□□□□□ -1.74
TOM1-217ENST00000497448 MIR22HGQ0VDD5 57 aa4.16□□□□□ -1.74
TOM1-217ENST00000497448 LINC01554Q52M75 96 aa4.16□□□□□ -1.74
TOM1-217ENST00000497448 KRTAP10-12P60413 245 aa4.14□□□□□ -1.75
TOM1-217ENST00000497448 MT4P47944 62 aa4.1□□□□□ -1.75
TOM1-217ENST00000497448 CDC42SE1Q9NRR8 79 aa4.1□□□□□ -1.75
TOM1-217ENST00000497448 KRTAP12-1P59990 96 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms