RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 PCP4P48539 62 aa8.86□□□□□ -0.99
RGP1-202ENST00000496906 ACYP2P14621 99 aa8.86□□□□□ -0.99
RGP1-202ENST00000496906 KRTAP3-3Q9BYR6 98 aa8.82□□□□□ -1
RGP1-202ENST00000496906 TMEM258P61165 79 aa8.76□□□□□ -1.01
RGP1-202ENST00000496906 KRTAP10-6P60371 365 aaPredicted RBP8.75□□□□□ -1.01
RGP1-202ENST00000496906 ATP5EP56381 51 aaPredicted RBP8.74□□□□□ -1.01
RGP1-202ENST00000496906 CSAG1Q6PB30 78 aa8.74□□□□□ -1.01
RGP1-202ENST00000496906 LORP23490 312 aaPredicted RBP8.73□□□□□ -1.01
RGP1-202ENST00000496906 COA5Q86WW8 74 aa8.71□□□□□ -1.02
RGP1-202ENST00000496906 CHKB-CPT1BH3BT56 60 aa8.7□□□□□ -1.02
RGP1-202ENST00000496906 KRTAP9-8Q9BYQ0 159 aa8.65□□□□□ -1.03
RGP1-202ENST00000496906 SPTSSBQ8NFR3 76 aa8.61□□□□□ -1.03
RGP1-202ENST00000496906 MT2AP02795 61 aa8.58□□□□□ -1.04
RGP1-202ENST00000496906 H0YAA0 97 aa8.53□□□□□ -1.04
RGP1-202ENST00000496906 MT1FP04733 61 aa8.52□□□□□ -1.04
RGP1-202ENST00000496906 SERP1Q9Y6X1 66 aa8.48□□□□□ -1.05
RGP1-202ENST00000496906 KRTAP10-10P60014 251 aa8.48□□□□□ -1.05
RGP1-202ENST00000496906 ADM2Q7Z4H4 148 aa8.45□□□□□ -1.06
RGP1-202ENST00000496906 LCE2DQ5TA82 110 aaPredicted RBP8.41□□□□□ -1.06
RGP1-202ENST00000496906 KRTAP3-2Q9BYR7 98 aa8.4□□□□□ -1.06
RGP1-202ENST00000496906 KRTAP9-2Q9BYQ4 174 aa8.39□□□□□ -1.07
RGP1-202ENST00000496906 P0C880 135 aa8.36□□□□□ -1.07
RGP1-202ENST00000496906 KRTAP9-3Q9BYQ3 159 aa8.35□□□□□ -1.07
RGP1-202ENST00000496906 CRIPTQ9P021 101 aa8.29□□□□□ -1.08
RGP1-202ENST00000496906 SEC61GP60059 68 aa8.28□□□□□ -1.08
RGP1-202ENST00000496906 RPS28P62857 69 aaKnown RBP8.28□□□□□ -1.08
RGP1-202ENST00000496906 LINC01558Q9Y6Z2 57 aa8.25□□□□□ -1.09
RGP1-202ENST00000496906 A0A1B0GU69 56 aa8.23□□□□□ -1.09
RGP1-202ENST00000496906 KRTAP19-1Q8IUB9 90 aa8.23□□□□□ -1.09
RGP1-202ENST00000496906 SPRR2GQ9BYE4 73 aa8.22□□□□□ -1.09
RGP1-202ENST00000496906 SMIM26A0A096LP01 95 aa8.19□□□□□ -1.1
RGP1-202ENST00000496906 R4GN34 69 aa8.18□□□□□ -1.1
RGP1-202ENST00000496906 LCE2BO14633 110 aa8.18□□□□□ -1.1
RGP1-202ENST00000496906 M0QZ58 72 aa8.15□□□□□ -1.1
RGP1-202ENST00000496906 PRR15LQ9BU68 103 aa8.15□□□□□ -1.1
RGP1-202ENST00000496906 Q1T7F1 81 aa8.14□□□□□ -1.11
RGP1-202ENST00000496906 V9GYY9 64 aa8.14□□□□□ -1.11
RGP1-202ENST00000496906 A0A1B0GU33 70 aa8.1□□□□□ -1.11
RGP1-202ENST00000496906 FSIP2Q5CZC0 6907 aa8.09□□□□□ -1.11
RGP1-202ENST00000496906 KRTAP13-4Q3LI77 160 aa8.08□□□□□ -1.12
RGP1-202ENST00000496906 USH2AO75445 5202 aa8.07□□□□□ -1.12
RGP1-202ENST00000496906 KRTAP19-8Q3LI54 63 aa8.06□□□□□ -1.12
RGP1-202ENST00000496906 Q5VV11 94 aa8.02□□□□□ -1.13
RGP1-202ENST00000496906 PSPHP1O15172 72 aa8.01□□□□□ -1.13
RGP1-202ENST00000496906 LINC01554Q52M75 96 aa8□□□□□ -1.13
RGP1-202ENST00000496906 CRCT1Q9UGL9 99 aa8□□□□□ -1.13
RGP1-202ENST00000496906 MT1BP07438 61 aa7.99□□□□□ -1.13
RGP1-202ENST00000496906 SPATA8Q6RVD6 105 aa7.99□□□□□ -1.13
RGP1-202ENST00000496906 KRTAP9-6A0A140TA67 174 aa7.95□□□□□ -1.14
RGP1-202ENST00000496906 UQCR11O14957 56 aa7.91□□□□□ -1.14
RGP1-202ENST00000496906 SSPOA2VEC9 5147 aa7.9□□□□□ -1.14
RGP1-202ENST00000496906 A6NN06 94 aa7.88□□□□□ -1.15
RGP1-202ENST00000496906 A0A0D9SG42 100 aa7.87□□□□□ -1.15
RGP1-202ENST00000496906 PLAC4Q8WY50 150 aa7.84□□□□□ -1.15
RGP1-202ENST00000496906 A8MU10 97 aa7.83□□□□□ -1.16
RGP1-202ENST00000496906 MIR22HGQ0VDD5 57 aa7.79□□□□□ -1.16
RGP1-202ENST00000496906 KRTAP19-6Q3LI70 58 aa7.77□□□□□ -1.17
RGP1-202ENST00000496906 A6NED7 52 aa7.76□□□□□ -1.17
RGP1-202ENST00000496906 KRTAP12-1P59990 96 aa7.74□□□□□ -1.17
RGP1-202ENST00000496906 SPINT4Q6UDR6 99 aa7.71□□□□□ -1.17
RGP1-202ENST00000496906 KRTAP12-2P59991 146 aa7.71□□□□□ -1.18
RGP1-202ENST00000496906 KRTAP10-5P60370 271 aa7.67□□□□□ -1.18
RGP1-202ENST00000496906 FCGBPQ9Y6R7 5405 aaPredicted RBP7.65□□□□□ -1.18
RGP1-202ENST00000496906 MT1XP80297 61 aa7.64□□□□□ -1.19
RGP1-202ENST00000496906 CAMK2N1Q7Z7J9 78 aa7.61□□□□□ -1.19
RGP1-202ENST00000496906 PRO2289Q9P1D8 64 aa7.59□□□□□ -1.19
RGP1-202ENST00000496906 CDC42SE1Q9NRR8 79 aa7.59□□□□□ -1.2
RGP1-202ENST00000496906 K7ERS5 55 aa7.5□□□□□ -1.21
RGP1-202ENST00000496906 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.43□□□□□ -1.22
RGP1-202ENST00000496906 BRK1Q8WUW1 75 aa7.39□□□□□ -1.23
RGP1-202ENST00000496906 MACF1Q9UPN3 7388 aaKnown RBP7.38□□□□□ -1.23
RGP1-202ENST00000496906 C10orf95Q9H7T3 257 aa7.35□□□□□ -1.23
RGP1-202ENST00000496906 KRTAP10-7P60409 375 aaPredicted RBP7.31□□□□□ -1.24
RGP1-202ENST00000496906 KRTAP10-12P60413 245 aa7.26□□□□□ -1.25
RGP1-202ENST00000496906 SYNE2Q8WXH0 6885 aaKnown RBP7.24□□□□□ -1.25
RGP1-202ENST00000496906 KRTAP9-7A8MTY7 169 aa7.2□□□□□ -1.26
RGP1-202ENST00000496906 TNP1P09430 55 aa7.19□□□□□ -1.26
RGP1-202ENST00000496906 KMT2DO14686 5537 aa7.18□□□□□ -1.26
RGP1-202ENST00000496906 ROMO1P60602 79 aa7.14□□□□□ -1.27
RGP1-202ENST00000496906 KRTAP4-8A0A0G2JLE6 195 aa7.12□□□□□ -1.27
RGP1-202ENST00000496906 KRTAP4-8Q9BYQ9 185 aa7.12□□□□□ -1.27
RGP1-202ENST00000496906 KRTAP6-3Q3LI67 103 aa7.1□□□□□ -1.27
RGP1-202ENST00000496906 KRTAP25-1Q3LHN0 102 aa7.08□□□□□ -1.28
RGP1-202ENST00000496906 PRO0628Q9UI54 55 aa7.03□□□□□ -1.28
RGP1-202ENST00000496906 KRTAP8-1Q8IUC2 63 aa7.02□□□□□ -1.29
RGP1-202ENST00000496906 PMAIP1Q13794 54 aa6.97□□□□□ -1.29
RGP1-202ENST00000496906 LCE3AQ5TA76 89 aa6.97□□□□□ -1.29
RGP1-202ENST00000496906 KRTAP5-9P26371 169 aa6.96□□□□□ -1.29
RGP1-202ENST00000496906 KRTAP23-1A1A580 65 aa6.86□□□□□ -1.31
RGP1-202ENST00000496906 SPRR2FQ96RM1 72 aa6.86□□□□□ -1.31
RGP1-202ENST00000496906 KRTAP19-7Q3SYF9 63 aa6.82□□□□□ -1.32
RGP1-202ENST00000496906 SVIPQ8NHG7 77 aa6.82□□□□□ -1.32
RGP1-202ENST00000496906 KRTAP19-5Q3LI72 72 aa6.81□□□□□ -1.32
RGP1-202ENST00000496906 MUC12Q9UKN1 5478 aa6.8□□□□□ -1.32
RGP1-202ENST00000496906 PP632Q6XCG6 107 aa6.75□□□□□ -1.33
RGP1-202ENST00000496906 NEBP20929 6669 aa6.75□□□□□ -1.33
RGP1-202ENST00000496906 MT1EP04732 61 aa6.73□□□□□ -1.33
RGP1-202ENST00000496906 KRTAP12-3P60328 96 aa6.69□□□□□ -1.34
RGP1-202ENST00000496906 MDN1Q9NU22 5596 aa6.69□□□□□ -1.34
RGP1-202ENST00000496906 SPRR2EP22531 72 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms