RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 ATP5EP56381 51 aaPredicted RBP10.56□□□□□ -0.72
C9orf3-222ENST00000496567 KRTAP10-6P60371 365 aaPredicted RBP10.55□□□□□ -0.72
C9orf3-222ENST00000496567 DMAC1Q96GE9 116 aa10.55□□□□□ -0.72
C9orf3-222ENST00000496567 LORP23490 312 aaPredicted RBP10.5□□□□□ -0.73
C9orf3-222ENST00000496567 LCA10Q71F78 164 aa10.5□□□□□ -0.73
C9orf3-222ENST00000496567 ACYP2P14621 99 aa10.45□□□□□ -0.74
C9orf3-222ENST00000496567 CSAG1Q6PB30 78 aa10.43□□□□□ -0.74
C9orf3-222ENST00000496567 KRTAP3-3Q9BYR6 98 aa10.39□□□□□ -0.75
C9orf3-222ENST00000496567 COA5Q86WW8 74 aa10.38□□□□□ -0.75
C9orf3-222ENST00000496567 KRTAP9-8Q9BYQ0 159 aa10.35□□□□□ -0.75
C9orf3-222ENST00000496567 SERP1Q9Y6X1 66 aa10.35□□□□□ -0.75
C9orf3-222ENST00000496567 CHKB-CPT1BH3BT56 60 aa10.28□□□□□ -0.76
C9orf3-222ENST00000496567 MT2AP02795 61 aa10.27□□□□□ -0.76
C9orf3-222ENST00000496567 RPS28P62857 69 aaKnown RBP10.22□□□□□ -0.77
C9orf3-222ENST00000496567 KRTAP10-10P60014 251 aa10.21□□□□□ -0.78
C9orf3-222ENST00000496567 SPTSSBQ8NFR3 76 aa10.21□□□□□ -0.78
C9orf3-222ENST00000496567 MT1FP04733 61 aa10.19□□□□□ -0.78
C9orf3-222ENST00000496567 H0YAA0 97 aa10.13□□□□□ -0.79
C9orf3-222ENST00000496567 LCE2DQ5TA82 110 aaPredicted RBP10.09□□□□□ -0.79
C9orf3-222ENST00000496567 SMIM26A0A096LP01 95 aa10.04□□□□□ -0.8
C9orf3-222ENST00000496567 ADM2Q7Z4H4 148 aa10.02□□□□□ -0.81
C9orf3-222ENST00000496567 KRTAP9-3Q9BYQ3 159 aa10.01□□□□□ -0.81
C9orf3-222ENST00000496567 KRTAP9-2Q9BYQ4 174 aa9.99□□□□□ -0.81
C9orf3-222ENST00000496567 CRIPTQ9P021 101 aa9.92□□□□□ -0.82
C9orf3-222ENST00000496567 LINC01558Q9Y6Z2 57 aa9.9□□□□□ -0.82
C9orf3-222ENST00000496567 Q1T7F1 81 aa9.89□□□□□ -0.83
C9orf3-222ENST00000496567 KRTAP3-2Q9BYR7 98 aa9.88□□□□□ -0.83
C9orf3-222ENST00000496567 P0C880 135 aa9.86□□□□□ -0.83
C9orf3-222ENST00000496567 V9GYY9 64 aa9.85□□□□□ -0.83
C9orf3-222ENST00000496567 LCE2BO14633 110 aa9.81□□□□□ -0.84
C9orf3-222ENST00000496567 SPRR2GQ9BYE4 73 aa9.81□□□□□ -0.84
C9orf3-222ENST00000496567 A0A1B0GU69 56 aa9.8□□□□□ -0.84
C9orf3-222ENST00000496567 KRTAP19-1Q8IUB9 90 aa9.8□□□□□ -0.84
C9orf3-222ENST00000496567 SEC61GP60059 68 aa9.79□□□□□ -0.84
C9orf3-222ENST00000496567 PRR15LQ9BU68 103 aa9.79□□□□□ -0.84
C9orf3-222ENST00000496567 PSPHP1O15172 72 aa9.75□□□□□ -0.85
C9orf3-222ENST00000496567 R4GN34 69 aa9.75□□□□□ -0.85
C9orf3-222ENST00000496567 USH2AO75445 5202 aa9.69□□□□□ -0.86
C9orf3-222ENST00000496567 M0QZ58 72 aa9.67□□□□□ -0.86
C9orf3-222ENST00000496567 Q5VV11 94 aa9.67□□□□□ -0.86
C9orf3-222ENST00000496567 KRTAP19-8Q3LI54 63 aa9.63□□□□□ -0.87
C9orf3-222ENST00000496567 FSIP2Q5CZC0 6907 aa9.62□□□□□ -0.87
C9orf3-222ENST00000496567 A0A1B0GU33 70 aa9.57□□□□□ -0.88
C9orf3-222ENST00000496567 CRCT1Q9UGL9 99 aa9.56□□□□□ -0.88
C9orf3-222ENST00000496567 MT1BP07438 61 aa9.52□□□□□ -0.89
C9orf3-222ENST00000496567 LINC01554Q52M75 96 aa9.5□□□□□ -0.89
C9orf3-222ENST00000496567 UQCR11O14957 56 aa9.46□□□□□ -0.89
C9orf3-222ENST00000496567 KRTAP13-4Q3LI77 160 aa9.46□□□□□ -0.89
C9orf3-222ENST00000496567 SSPOA2VEC9 5147 aa9.46□□□□□ -0.9
C9orf3-222ENST00000496567 SPATA8Q6RVD6 105 aa9.45□□□□□ -0.9
C9orf3-222ENST00000496567 KRTAP9-6A0A140TA67 174 aa9.44□□□□□ -0.9
C9orf3-222ENST00000496567 A6NED7 52 aa9.44□□□□□ -0.9
C9orf3-222ENST00000496567 PLAC4Q8WY50 150 aa9.4□□□□□ -0.9
C9orf3-222ENST00000496567 KRTAP19-6Q3LI70 58 aa9.38□□□□□ -0.91
C9orf3-222ENST00000496567 MIR22HGQ0VDD5 57 aa9.35□□□□□ -0.91
C9orf3-222ENST00000496567 A6NN06 94 aa9.34□□□□□ -0.91
C9orf3-222ENST00000496567 A8MU10 97 aa9.29□□□□□ -0.92
C9orf3-222ENST00000496567 A0A0D9SG42 100 aa9.27□□□□□ -0.93
C9orf3-222ENST00000496567 CDC42SE1Q9NRR8 79 aa9.24□□□□□ -0.93
C9orf3-222ENST00000496567 BRK1Q8WUW1 75 aa9.2□□□□□ -0.94
C9orf3-222ENST00000496567 KRTAP10-5P60370 271 aa9.2□□□□□ -0.94
C9orf3-222ENST00000496567 FCGBPQ9Y6R7 5405 aaPredicted RBP9.18□□□□□ -0.94
C9orf3-222ENST00000496567 PRO2289Q9P1D8 64 aa9.15□□□□□ -0.95
C9orf3-222ENST00000496567 SPINT4Q6UDR6 99 aa9.11□□□□□ -0.95
C9orf3-222ENST00000496567 MT1XP80297 61 aa9.09□□□□□ -0.95
C9orf3-222ENST00000496567 KRTAP12-1P59990 96 aa9.08□□□□□ -0.96
C9orf3-222ENST00000496567 CAMK2N1Q7Z7J9 78 aa9.06□□□□□ -0.96
C9orf3-222ENST00000496567 KRTAP12-2P59991 146 aa9.05□□□□□ -0.96
C9orf3-222ENST00000496567 K7ERS5 55 aa8.94□□□□□ -0.98
C9orf3-222ENST00000496567 PRO0628Q9UI54 55 aa8.87□□□□□ -0.99
C9orf3-222ENST00000496567 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.85□□□□□ -0.99
C9orf3-222ENST00000496567 MACF1Q9UPN3 7388 aaKnown RBP8.78□□□□□ -1
C9orf3-222ENST00000496567 KRTAP10-7P60409 375 aaPredicted RBP8.69□□□□□ -1.02
C9orf3-222ENST00000496567 PMAIP1Q13794 54 aa8.69□□□□□ -1.02
C9orf3-222ENST00000496567 KRTAP10-12P60413 245 aa8.65□□□□□ -1.02
C9orf3-222ENST00000496567 C10orf95Q9H7T3 257 aa8.63□□□□□ -1.03
C9orf3-222ENST00000496567 SYNE2Q8WXH0 6885 aaKnown RBP8.56□□□□□ -1.04
C9orf3-222ENST00000496567 KRTAP9-7A8MTY7 169 aa8.56□□□□□ -1.04
C9orf3-222ENST00000496567 ROMO1P60602 79 aa8.56□□□□□ -1.04
C9orf3-222ENST00000496567 TNP1P09430 55 aa8.52□□□□□ -1.04
C9orf3-222ENST00000496567 KMT2DO14686 5537 aa8.52□□□□□ -1.05
C9orf3-222ENST00000496567 KRTAP6-3Q3LI67 103 aa8.5□□□□□ -1.05
C9orf3-222ENST00000496567 KRTAP4-8A0A0G2JLE6 195 aa8.48□□□□□ -1.05
C9orf3-222ENST00000496567 KRTAP4-8Q9BYQ9 185 aa8.48□□□□□ -1.05
C9orf3-222ENST00000496567 KRTAP8-1Q8IUC2 63 aa8.47□□□□□ -1.05
C9orf3-222ENST00000496567 KRTAP5-9P26371 169 aa8.37□□□□□ -1.07
C9orf3-222ENST00000496567 KRTAP25-1Q3LHN0 102 aa8.36□□□□□ -1.07
C9orf3-222ENST00000496567 SPRR2FQ96RM1 72 aa8.29□□□□□ -1.08
C9orf3-222ENST00000496567 KTN1-AS1Q86SY8 53 aa8.26□□□□□ -1.09
C9orf3-222ENST00000496567 LCE3AQ5TA76 89 aa8.22□□□□□ -1.09
C9orf3-222ENST00000496567 PRAC1Q96KF2 57 aa8.2□□□□□ -1.1
C9orf3-222ENST00000496567 MUC12Q9UKN1 5478 aa8.16□□□□□ -1.1
C9orf3-222ENST00000496567 KRTAP19-7Q3SYF9 63 aa8.11□□□□□ -1.11
C9orf3-222ENST00000496567 KRTAP23-1A1A580 65 aa8.09□□□□□ -1.11
C9orf3-222ENST00000496567 KRTAP19-5Q3LI72 72 aa8.09□□□□□ -1.11
C9orf3-222ENST00000496567 MDN1Q9NU22 5596 aa8.06□□□□□ -1.12
C9orf3-222ENST00000496567 MT1EP04732 61 aa8.02□□□□□ -1.13
C9orf3-222ENST00000496567 SPRR2EP22531 72 aa8.01□□□□□ -1.13
C9orf3-222ENST00000496567 SPRR2BP35325 72 aa8.01□□□□□ -1.13
C9orf3-222ENST00000496567 SPRR2AP35326 72 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 194.2 ms