RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 COX6B2Q6YFQ2 88 aa7.05□□□□□ -1.28
SPTBN1-205ENST00000496323 LINC01558Q9Y6Z2 57 aa7□□□□□ -1.29
SPTBN1-205ENST00000496323 HERC1Q15751 4861 aa6.99□□□□□ -1.29
SPTBN1-205ENST00000496323 Q5VV11 94 aa6.99□□□□□ -1.29
SPTBN1-205ENST00000496323 PRR15LQ9BU68 103 aa6.96□□□□□ -1.3
SPTBN1-205ENST00000496323 SEC61BP60468 96 aaKnown RBP6.94□□□□□ -1.3
SPTBN1-205ENST00000496323 HMCN2Q8NDA2 5059 aa6.92□□□□□ -1.3
SPTBN1-205ENST00000496323 A6NN06 94 aa6.92□□□□□ -1.3
SPTBN1-205ENST00000496323 SPTSSBQ8NFR3 76 aa6.91□□□□□ -1.3
SPTBN1-205ENST00000496323 KRTAP4-1Q9BYQ7 146 aa6.89□□□□□ -1.31
SPTBN1-205ENST00000496323 LCA10Q71F78 164 aa6.88□□□□□ -1.31
SPTBN1-205ENST00000496323 MUC17Q685J3 4493 aa6.88□□□□□ -1.31
SPTBN1-205ENST00000496323 KRTAP3-3Q9BYR6 98 aa6.86□□□□□ -1.31
SPTBN1-205ENST00000496323 H1FX-AS1Q4G0G2 97 aa6.84□□□□□ -1.32
SPTBN1-205ENST00000496323 A0A1B0GU69 56 aa6.83□□□□□ -1.32
SPTBN1-205ENST00000496323 S4R3F8 94 aa6.81□□□□□ -1.32
SPTBN1-205ENST00000496323 A6NED7 52 aa6.81□□□□□ -1.32
SPTBN1-205ENST00000496323 H3BS24 57 aa6.8□□□□□ -1.32
SPTBN1-205ENST00000496323 CDC42SE1Q9NRR8 79 aa6.8□□□□□ -1.32
SPTBN1-205ENST00000496323 MUC2Q02817 5179 aa6.76□□□□□ -1.33
SPTBN1-205ENST00000496323 KRTAP19-2Q3LHN2 52 aa6.73□□□□□ -1.33
SPTBN1-205ENST00000496323 LCE2DQ5TA82 110 aaPredicted RBP6.69□□□□□ -1.34
SPTBN1-205ENST00000496323 UQCR11O14957 56 aa6.64□□□□□ -1.35
SPTBN1-205ENST00000496323 KRTAP10-6P60371 365 aaPredicted RBP6.64□□□□□ -1.35
SPTBN1-205ENST00000496323 PRAC1Q96KF2 57 aa6.64□□□□□ -1.35
SPTBN1-205ENST00000496323 KRTAP3-2Q9BYR7 98 aa6.64□□□□□ -1.35
SPTBN1-205ENST00000496323 CSAG1Q6PB30 78 aa6.64□□□□□ -1.35
SPTBN1-205ENST00000496323 LINC01554Q52M75 96 aa6.63□□□□□ -1.35
SPTBN1-205ENST00000496323 UBR4Q5T4S7 5183 aa6.61□□□□□ -1.35
SPTBN1-205ENST00000496323 SPATA8Q6RVD6 105 aa6.61□□□□□ -1.35
SPTBN1-205ENST00000496323 A0A1B0GU33 70 aa6.6□□□□□ -1.35
SPTBN1-205ENST00000496323 MIR22HGQ0VDD5 57 aa6.59□□□□□ -1.35
SPTBN1-205ENST00000496323 ADM2Q7Z4H4 148 aa6.57□□□□□ -1.36
SPTBN1-205ENST00000496323 P0C880 135 aa6.57□□□□□ -1.36
SPTBN1-205ENST00000496323 H0YAA0 97 aa6.56□□□□□ -1.36
SPTBN1-205ENST00000496323 RNF213Q63HN8 5207 aa6.55□□□□□ -1.36
SPTBN1-205ENST00000496323 FLGP20930 4061 aaPredicted RBP6.54□□□□□ -1.36
SPTBN1-205ENST00000496323 LCE2CQ5TA81 110 aa6.52□□□□□ -1.37
SPTBN1-205ENST00000496323 KRTAP13-4Q3LI77 160 aa6.49□□□□□ -1.37
SPTBN1-205ENST00000496323 FAT4Q6V0I7 4981 aa6.45□□□□□ -1.38
SPTBN1-205ENST00000496323 LORP23490 312 aaPredicted RBP6.36□□□□□ -1.39
SPTBN1-205ENST00000496323 MT1HP80294 61 aa6.35□□□□□ -1.39
SPTBN1-205ENST00000496323 A0A0D9SG42 100 aa6.35□□□□□ -1.39
SPTBN1-205ENST00000496323 M0QZ58 72 aa6.34□□□□□ -1.39
SPTBN1-205ENST00000496323 R4GN34 69 aa6.28□□□□□ -1.4
SPTBN1-205ENST00000496323 M0R2T5 61 aa6.26□□□□□ -1.41
SPTBN1-205ENST00000496323 KRTAP12-2P59991 146 aa6.23□□□□□ -1.41
SPTBN1-205ENST00000496323 KRTAP12-1P59990 96 aa6.22□□□□□ -1.41
SPTBN1-205ENST00000496323 K7ERS5 55 aa6.21□□□□□ -1.42
SPTBN1-205ENST00000496323 ROMO1P60602 79 aa6.19□□□□□ -1.42
SPTBN1-205ENST00000496323 SPINT4Q6UDR6 99 aa6.17□□□□□ -1.42
SPTBN1-205ENST00000496323 KRTAP9-8Q9BYQ0 159 aa6.15□□□□□ -1.43
SPTBN1-205ENST00000496323 CRIPTQ9P021 101 aa6.15□□□□□ -1.43
SPTBN1-205ENST00000496323 MT2AP02795 61 aa6.13□□□□□ -1.43
SPTBN1-205ENST00000496323 KRTAP25-1Q3LHN0 102 aa6.13□□□□□ -1.43
SPTBN1-205ENST00000496323 MT1FP04733 61 aa6.11□□□□□ -1.43
SPTBN1-205ENST00000496323 KRTAP10-10P60014 251 aa6.06□□□□□ -1.44
SPTBN1-205ENST00000496323 KRTAP19-1Q8IUB9 90 aa6.06□□□□□ -1.44
SPTBN1-205ENST00000496323 SPRR2GQ9BYE4 73 aa6.06□□□□□ -1.44
SPTBN1-205ENST00000496323 LCE2AQ5TA79 106 aaPredicted RBP6.01□□□□□ -1.45
SPTBN1-205ENST00000496323 KRTAP9-3Q9BYQ3 159 aa5.92□□□□□ -1.46
SPTBN1-205ENST00000496323 A0A0A0MQY5 61 aa5.89□□□□□ -1.47
SPTBN1-205ENST00000496323 CAMK2N1Q7Z7J9 78 aa5.89□□□□□ -1.47
SPTBN1-205ENST00000496323 C10orf95Q9H7T3 257 aa5.89□□□□□ -1.47
SPTBN1-205ENST00000496323 KRTAP19-8Q3LI54 63 aa5.87□□□□□ -1.47
SPTBN1-205ENST00000496323 PLAC4Q8WY50 150 aa5.83□□□□□ -1.48
SPTBN1-205ENST00000496323 MT1BP07438 61 aa5.82□□□□□ -1.48
SPTBN1-205ENST00000496323 NDUFAF8A1L188 74 aa5.79□□□□□ -1.48
SPTBN1-205ENST00000496323 LCE2BO14633 110 aa5.75□□□□□ -1.49
SPTBN1-205ENST00000496323 KRTAP15-1Q3LI76 137 aa5.74□□□□□ -1.49
SPTBN1-205ENST00000496323 MT1XP80297 61 aa5.66□□□□□ -1.5
SPTBN1-205ENST00000496323 KRTAP10-5P60370 271 aa5.65□□□□□ -1.5
SPTBN1-205ENST00000496323 TNP1P09430 55 aa5.62□□□□□ -1.51
SPTBN1-205ENST00000496323 USH2AO75445 5202 aa5.6□□□□□ -1.51
SPTBN1-205ENST00000496323 LUZP6Q538Z0 58 aa5.51□□□□□ -1.53
SPTBN1-205ENST00000496323 PP632Q6XCG6 107 aa5.5□□□□□ -1.53
SPTBN1-205ENST00000496323 PRO2289Q9P1D8 64 aa5.49□□□□□ -1.53
SPTBN1-205ENST00000496323 KRTAP23-1A1A580 65 aa5.47□□□□□ -1.53
SPTBN1-205ENST00000496323 KRTAP10-7P60409 375 aaPredicted RBP5.44□□□□□ -1.54
SPTBN1-205ENST00000496323 LCE3AQ5TA76 89 aa5.42□□□□□ -1.54
SPTBN1-205ENST00000496323 SSPOA2VEC9 5147 aa5.38□□□□□ -1.55
SPTBN1-205ENST00000496323 KRTAP10-12P60413 245 aa5.37□□□□□ -1.55
SPTBN1-205ENST00000496323 FSIP2Q5CZC0 6907 aa5.34□□□□□ -1.55
SPTBN1-205ENST00000496323 KRTAP19-6Q3LI70 58 aa5.32□□□□□ -1.56
SPTBN1-205ENST00000496323 KRTAP8-1Q8IUC2 63 aa5.29□□□□□ -1.56
SPTBN1-205ENST00000496323 KMT2DO14686 5537 aa5.23□□□□□ -1.57
SPTBN1-205ENST00000496323 KRTAP4-8A0A0G2JLE6 195 aa5.22□□□□□ -1.57
SPTBN1-205ENST00000496323 KRTAP4-8Q9BYQ9 185 aa5.22□□□□□ -1.57
SPTBN1-205ENST00000496323 KRTAP12-3P60328 96 aa5.18□□□□□ -1.58
SPTBN1-205ENST00000496323 FCGBPQ9Y6R7 5405 aaPredicted RBP5.14□□□□□ -1.59
SPTBN1-205ENST00000496323 KRTAP19-5Q3LI72 72 aa5.13□□□□□ -1.59
SPTBN1-205ENST00000496323 KRTAP9-2Q9BYQ4 174 aa5.12□□□□□ -1.59
SPTBN1-205ENST00000496323 KRTAP19-7Q3SYF9 63 aa5.05□□□□□ -1.6
SPTBN1-205ENST00000496323 SPRR5A0A1B0GTR4 108 aa4.99□□□□□ -1.61
SPTBN1-205ENST00000496323 CRCT1Q9UGL9 99 aa4.95□□□□□ -1.62
SPTBN1-205ENST00000496323 MT1EP04732 61 aa4.94□□□□□ -1.62
SPTBN1-205ENST00000496323 MACF1Q9UPN3 7388 aaKnown RBP4.9□□□□□ -1.63
SPTBN1-205ENST00000496323 MT1LQ93083 61 aa4.86□□□□□ -1.63
SPTBN1-205ENST00000496323 LCE3CQ5T5A8 94 aa4.85□□□□□ -1.63
SPTBN1-205ENST00000496323 LOC100996750A0A140TA64 210 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms