RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 RPL37P61927 97 aaKnown RBP11.26□□□□□ -0.61
FGFR1-223ENST00000496296 SPTSSBQ8NFR3 76 aa11.24□□□□□ -0.61
FGFR1-223ENST00000496296 HMCN2Q8NDA2 5059 aa11.23□□□□□ -0.61
FGFR1-223ENST00000496296 A0A1B0GU69 56 aa11.21□□□□□ -0.61
FGFR1-223ENST00000496296 A6NN06 94 aa11.18□□□□□ -0.62
FGFR1-223ENST00000496296 KTN1-AS1Q86SY8 53 aa11.1□□□□□ -0.63
FGFR1-223ENST00000496296 KRTAP3-1Q9BYR8 98 aa11.1□□□□□ -0.63
FGFR1-223ENST00000496296 SPATA8Q6RVD6 105 aa11.07□□□□□ -0.64
FGFR1-223ENST00000496296 UQCR11O14957 56 aa11.03□□□□□ -0.64
FGFR1-223ENST00000496296 COX6B2Q6YFQ2 88 aa11.02□□□□□ -0.65
FGFR1-223ENST00000496296 UBR4Q5T4S7 5183 aa11.01□□□□□ -0.65
FGFR1-223ENST00000496296 LPAP08519 4548 aa11.01□□□□□ -0.65
FGFR1-223ENST00000496296 LRP2P98164 4655 aa11□□□□□ -0.65
FGFR1-223ENST00000496296 MIR22HGQ0VDD5 57 aa10.97□□□□□ -0.65
FGFR1-223ENST00000496296 SEC61BP60468 96 aaKnown RBP10.94□□□□□ -0.66
FGFR1-223ENST00000496296 SEC61GP60059 68 aa10.91□□□□□ -0.66
FGFR1-223ENST00000496296 RNF213Q63HN8 5207 aa10.77□□□□□ -0.68
FGFR1-223ENST00000496296 RBM12B-AS1Q9P1G2 102 aa10.72□□□□□ -0.69
FGFR1-223ENST00000496296 KRTAP3-3Q9BYR6 98 aa10.68□□□□□ -0.7
FGFR1-223ENST00000496296 A0A1B0GU33 70 aa10.64□□□□□ -0.71
FGFR1-223ENST00000496296 H1FX-AS1Q4G0G2 97 aa10.64□□□□□ -0.71
FGFR1-223ENST00000496296 H0YAA0 97 aa10.63□□□□□ -0.71
FGFR1-223ENST00000496296 S4R3F8 94 aa10.59□□□□□ -0.71
FGFR1-223ENST00000496296 MUC2Q02817 5179 aa10.59□□□□□ -0.71
FGFR1-223ENST00000496296 KRTAP4-1Q9BYQ7 146 aa10.58□□□□□ -0.72
FGFR1-223ENST00000496296 MUC17Q685J3 4493 aa10.55□□□□□ -0.72
FGFR1-223ENST00000496296 PRAC1Q96KF2 57 aa10.51□□□□□ -0.73
FGFR1-223ENST00000496296 ADM2Q7Z4H4 148 aa10.5□□□□□ -0.73
FGFR1-223ENST00000496296 KRTAP10-6P60371 365 aaPredicted RBP10.48□□□□□ -0.73
FGFR1-223ENST00000496296 KRTAP3-2Q9BYR7 98 aa10.46□□□□□ -0.74
FGFR1-223ENST00000496296 K7ERS5 55 aa10.31□□□□□ -0.76
FGFR1-223ENST00000496296 CSAG1Q6PB30 78 aa10.3□□□□□ -0.76
FGFR1-223ENST00000496296 KRTAP19-2Q3LHN2 52 aa10.29□□□□□ -0.76
FGFR1-223ENST00000496296 KRTAP13-4Q3LI77 160 aa10.25□□□□□ -0.77
FGFR1-223ENST00000496296 P0C880 135 aa10.24□□□□□ -0.77
FGFR1-223ENST00000496296 LINC01554Q52M75 96 aa10.24□□□□□ -0.77
FGFR1-223ENST00000496296 FAT4Q6V0I7 4981 aa10.14□□□□□ -0.79
FGFR1-223ENST00000496296 KRTAP25-1Q3LHN0 102 aa10.1□□□□□ -0.79
FGFR1-223ENST00000496296 M0QZ58 72 aa10.06□□□□□ -0.8
FGFR1-223ENST00000496296 LCE2CQ5TA81 110 aa10.05□□□□□ -0.8
FGFR1-223ENST00000496296 ROMO1P60602 79 aa10.04□□□□□ -0.8
FGFR1-223ENST00000496296 A0A0D9SG42 100 aa10.02□□□□□ -0.8
FGFR1-223ENST00000496296 LCE2AQ5TA79 106 aaPredicted RBP10.02□□□□□ -0.8
FGFR1-223ENST00000496296 FLGP20930 4061 aaPredicted RBP9.91□□□□□ -0.82
FGFR1-223ENST00000496296 KRTAP12-1P59990 96 aa9.9□□□□□ -0.82
FGFR1-223ENST00000496296 M0R2T5 61 aa9.89□□□□□ -0.83
FGFR1-223ENST00000496296 KRTAP12-2P59991 146 aa9.89□□□□□ -0.83
FGFR1-223ENST00000496296 MT1HP80294 61 aa9.88□□□□□ -0.83
FGFR1-223ENST00000496296 CRIPTQ9P021 101 aa9.78□□□□□ -0.84
FGFR1-223ENST00000496296 R4GN34 69 aa9.76□□□□□ -0.85
FGFR1-223ENST00000496296 SPINT4Q6UDR6 99 aa9.74□□□□□ -0.85
FGFR1-223ENST00000496296 LORP23490 312 aaPredicted RBP9.68□□□□□ -0.86
FGFR1-223ENST00000496296 KRTAP9-2Q9BYQ4 174 aa9.58□□□□□ -0.88
FGFR1-223ENST00000496296 C10orf95Q9H7T3 257 aa9.52□□□□□ -0.89
FGFR1-223ENST00000496296 KRTAP9-8Q9BYQ0 159 aa9.51□□□□□ -0.89
FGFR1-223ENST00000496296 MT2AP02795 61 aa9.49□□□□□ -0.89
FGFR1-223ENST00000496296 KRTAP10-10P60014 251 aa9.48□□□□□ -0.89
FGFR1-223ENST00000496296 MT1FP04733 61 aa9.44□□□□□ -0.9
FGFR1-223ENST00000496296 LCE2DQ5TA82 110 aaPredicted RBP9.39□□□□□ -0.91
FGFR1-223ENST00000496296 SPRR2GQ9BYE4 73 aa9.35□□□□□ -0.91
FGFR1-223ENST00000496296 FSIP2Q5CZC0 6907 aa9.33□□□□□ -0.92
FGFR1-223ENST00000496296 KRTAP19-1Q8IUB9 90 aa9.29□□□□□ -0.92
FGFR1-223ENST00000496296 CAMK2N1Q7Z7J9 78 aa9.19□□□□□ -0.94
FGFR1-223ENST00000496296 KRTAP15-1Q3LI76 137 aa9.18□□□□□ -0.94
FGFR1-223ENST00000496296 KRTAP9-6A0A140TA67 174 aa9.17□□□□□ -0.94
FGFR1-223ENST00000496296 KRTAP9-3Q9BYQ3 159 aa9.17□□□□□ -0.94
FGFR1-223ENST00000496296 PLAC4Q8WY50 150 aa9.13□□□□□ -0.95
FGFR1-223ENST00000496296 CRCT1Q9UGL9 99 aa9.08□□□□□ -0.96
FGFR1-223ENST00000496296 KRTAP19-8Q3LI54 63 aa9.08□□□□□ -0.96
FGFR1-223ENST00000496296 H3BS24 57 aa9.03□□□□□ -0.96
FGFR1-223ENST00000496296 PP632Q6XCG6 107 aa9.03□□□□□ -0.96
FGFR1-223ENST00000496296 MT1BP07438 61 aa8.94□□□□□ -0.98
FGFR1-223ENST00000496296 USH2AO75445 5202 aa8.93□□□□□ -0.98
FGFR1-223ENST00000496296 KRTAP23-1A1A580 65 aa8.91□□□□□ -0.98
FGFR1-223ENST00000496296 LCE2BO14633 110 aa8.9□□□□□ -0.98
FGFR1-223ENST00000496296 TNP1P09430 55 aa8.9□□□□□ -0.98
FGFR1-223ENST00000496296 SSPOA2VEC9 5147 aa8.81□□□□□ -1
FGFR1-223ENST00000496296 NDUFAF8A1L188 74 aa8.78□□□□□ -1
FGFR1-223ENST00000496296 PRO2289Q9P1D8 64 aa8.68□□□□□ -1.02
FGFR1-223ENST00000496296 KRTAP10-5P60370 271 aa8.66□□□□□ -1.02
FGFR1-223ENST00000496296 MT1XP80297 61 aa8.66□□□□□ -1.02
FGFR1-223ENST00000496296 FCGBPQ9Y6R7 5405 aaPredicted RBP8.59□□□□□ -1.03
FGFR1-223ENST00000496296 KRTAP19-6Q3LI70 58 aa8.51□□□□□ -1.05
FGFR1-223ENST00000496296 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.45□□□□□ -1.06
FGFR1-223ENST00000496296 LCE3AQ5TA76 89 aa8.43□□□□□ -1.06
FGFR1-223ENST00000496296 LUZP6Q538Z0 58 aa8.4□□□□□ -1.07
FGFR1-223ENST00000496296 SPRR5A0A1B0GTR4 108 aa8.36□□□□□ -1.07
FGFR1-223ENST00000496296 MACF1Q9UPN3 7388 aaKnown RBP8.35□□□□□ -1.07
FGFR1-223ENST00000496296 KRTAP8-1Q8IUC2 63 aa8.35□□□□□ -1.07
FGFR1-223ENST00000496296 KRTAP10-7P60409 375 aaPredicted RBP8.32□□□□□ -1.08
FGFR1-223ENST00000496296 KRTAP10-12P60413 245 aa8.29□□□□□ -1.08
FGFR1-223ENST00000496296 KRTAP9-7A8MTY7 169 aa8.28□□□□□ -1.08
FGFR1-223ENST00000496296 SYNE2Q8WXH0 6885 aaKnown RBP8.27□□□□□ -1.09
FGFR1-223ENST00000496296 KRTAP12-3P60328 96 aa8.08□□□□□ -1.12
FGFR1-223ENST00000496296 KRTAP4-8A0A0G2JLE6 195 aa7.98□□□□□ -1.13
FGFR1-223ENST00000496296 KRTAP4-8Q9BYQ9 185 aa7.98□□□□□ -1.13
FGFR1-223ENST00000496296 KRTAP6-3Q3LI67 103 aa7.94□□□□□ -1.14
FGFR1-223ENST00000496296 KMT2DO14686 5537 aa7.91□□□□□ -1.14
FGFR1-223ENST00000496296 A0A0A0MQY5 61 aa7.89□□□□□ -1.15
FGFR1-223ENST00000496296 KRTAP19-5Q3LI72 72 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms