RNA–Protein interactions for RNA: ENST00000495940.2

TFE3-205, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-205ENST00000495940 Q5W150 140 aa7.57□□□□□ -1.2
TFE3-205ENST00000495940 IGKV2-30P06310 120 aa7.56□□□□□ -1.2
TFE3-205ENST00000495940 A6NED7 52 aa7.54□□□□□ -1.2
TFE3-205ENST00000495940 CDC42SE1Q9NRR8 79 aa7.54□□□□□ -1.2
TFE3-205ENST00000495940 KRTAP16-1A8MUX0 517 aa7.52□□□□□ -1.21
TFE3-205ENST00000495940 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.51□□□□□ -1.21
TFE3-205ENST00000495940 LINC00304Q8N9R0 145 aa7.51□□□□□ -1.21
TFE3-205ENST00000495940 LCE2CQ5TA81 110 aa7.5□□□□□ -1.21
TFE3-205ENST00000495940 PMAIP1Q13794 54 aa7.49□□□□□ -1.21
TFE3-205ENST00000495940 MT1HP80294 61 aa7.45□□□□□ -1.22
TFE3-205ENST00000495940 KRTAP19-2Q3LHN2 52 aa7.43□□□□□ -1.22
TFE3-205ENST00000495940 LORP23490 312 aaPredicted RBP7.42□□□□□ -1.22
TFE3-205ENST00000495940 LCA10Q71F78 164 aa7.42□□□□□ -1.22
TFE3-205ENST00000495940 IGKV2D-30A0A075B6S6 120 aa7.4□□□□□ -1.22
TFE3-205ENST00000495940 KRTAP10-6P60371 365 aaPredicted RBP7.39□□□□□ -1.23
TFE3-205ENST00000495940 SEC61BP60468 96 aaKnown RBP7.39□□□□□ -1.23
TFE3-205ENST00000495940 C7orf65Q6ZTY9 151 aa7.39□□□□□ -1.23
TFE3-205ENST00000495940 SPTSSBQ8NFR3 76 aa7.39□□□□□ -1.23
TFE3-205ENST00000495940 A0A1B0GU69 56 aa7.37□□□□□ -1.23
TFE3-205ENST00000495940 KTN1-AS1Q86SY8 53 aa7.35□□□□□ -1.23
TFE3-205ENST00000495940 A6NN06 94 aa7.32□□□□□ -1.24
TFE3-205ENST00000495940 SPINK7P58062 85 aa7.31□□□□□ -1.24
TFE3-205ENST00000495940 C20orf166-AS1Q96NR2 134 aa7.31□□□□□ -1.24
TFE3-205ENST00000495940 A8MUU9 505 aa7.3□□□□□ -1.24
TFE3-205ENST00000495940 SPATA8Q6RVD6 105 aa7.3□□□□□ -1.24
TFE3-205ENST00000495940 UQCR11O14957 56 aa7.29□□□□□ -1.24
TFE3-205ENST00000495940 SEC61GP60059 68 aa7.26□□□□□ -1.25
TFE3-205ENST00000495940 FLGP20930 4061 aaPredicted RBP7.26□□□□□ -1.25
TFE3-205ENST00000495940 SSPOA2VEC9 5147 aa7.24□□□□□ -1.25
TFE3-205ENST00000495940 XP32Q5T750 250 aa7.24□□□□□ -1.25
TFE3-205ENST00000495940 A8MU10 97 aa7.23□□□□□ -1.25
TFE3-205ENST00000495940 M0R2T5 61 aa7.23□□□□□ -1.25
TFE3-205ENST00000495940 MIR22HGQ0VDD5 57 aa7.21□□□□□ -1.26
TFE3-205ENST00000495940 USH2AO75445 5202 aa7.2□□□□□ -1.26
TFE3-205ENST00000495940 FCGBPQ9Y6R7 5405 aaPredicted RBP7.15□□□□□ -1.26
TFE3-205ENST00000495940 COX6B2Q6YFQ2 88 aa7.07□□□□□ -1.28
TFE3-205ENST00000495940 C9orf92A6NGG3 77 aa7.05□□□□□ -1.28
TFE3-205ENST00000495940 RBM12B-AS1Q9P1G2 102 aa7.04□□□□□ -1.28
TFE3-205ENST00000495940 KRTAP19-1Q8IUB9 90 aa7.02□□□□□ -1.29
TFE3-205ENST00000495940 MACF1Q9UPN3 7388 aaKnown RBP6.99□□□□□ -1.29
TFE3-205ENST00000495940 A0A1B0GU33 70 aa6.98□□□□□ -1.29
TFE3-205ENST00000495940 KRTAP3-1Q9BYR8 98 aa6.97□□□□□ -1.29
TFE3-205ENST00000495940 RPL37P61927 97 aaKnown RBP6.95□□□□□ -1.3
TFE3-205ENST00000495940 H1FX-AS1Q4G0G2 97 aa6.95□□□□□ -1.3
TFE3-205ENST00000495940 KRTAP9-8Q9BYQ0 159 aa6.94□□□□□ -1.3
TFE3-205ENST00000495940 SYNE2Q8WXH0 6885 aaKnown RBP6.94□□□□□ -1.3
TFE3-205ENST00000495940 K7ERS5 55 aa6.92□□□□□ -1.3
TFE3-205ENST00000495940 LCE2BO14633 110 aa6.88□□□□□ -1.31
TFE3-205ENST00000495940 H0YAA0 97 aa6.86□□□□□ -1.31
TFE3-205ENST00000495940 MT2AP02795 61 aa6.8□□□□□ -1.32
TFE3-205ENST00000495940 S4R3F8 94 aa6.78□□□□□ -1.32
TFE3-205ENST00000495940 LINC01554Q52M75 96 aa6.77□□□□□ -1.33
TFE3-205ENST00000495940 MT1FP04733 61 aa6.76□□□□□ -1.33
TFE3-205ENST00000495940 PRAC1Q96KF2 57 aa6.76□□□□□ -1.33
TFE3-205ENST00000495940 KRTAP6-3Q3LI67 103 aa6.75□□□□□ -1.33
TFE3-205ENST00000495940 KRTAP9-3Q9BYQ3 159 aa6.73□□□□□ -1.33
TFE3-205ENST00000495940 KRTAP3-3Q9BYR6 98 aa6.71□□□□□ -1.34
TFE3-205ENST00000495940 KRTAP19-6Q3LI70 58 aa6.7□□□□□ -1.34
TFE3-205ENST00000495940 ADM2Q7Z4H4 148 aa6.7□□□□□ -1.34
TFE3-205ENST00000495940 CSAG1Q6PB30 78 aa6.69□□□□□ -1.34
TFE3-205ENST00000495940 KRTAP10-10P60014 251 aa6.65□□□□□ -1.34
TFE3-205ENST00000495940 KRTAP25-1Q3LHN0 102 aa6.64□□□□□ -1.35
TFE3-205ENST00000495940 ROMO1P60602 79 aa6.62□□□□□ -1.35
TFE3-205ENST00000495940 KRTAP3-2Q9BYR7 98 aa6.62□□□□□ -1.35
TFE3-205ENST00000495940 M0QZ58 72 aa6.6□□□□□ -1.35
TFE3-205ENST00000495940 NEBP20929 6669 aa6.58□□□□□ -1.36
TFE3-205ENST00000495940 KRTAP20-1Q3LI63 56 aa6.58□□□□□ -1.36
TFE3-205ENST00000495940 MUC12Q9UKN1 5478 aa6.55□□□□□ -1.36
TFE3-205ENST00000495940 KRTAP13-4Q3LI77 160 aa6.47□□□□□ -1.37
TFE3-205ENST00000495940 P0C880 135 aa6.46□□□□□ -1.38
TFE3-205ENST00000495940 A0A0D9SG42 100 aa6.43□□□□□ -1.38
TFE3-205ENST00000495940 CRIPTQ9P021 101 aa6.38□□□□□ -1.39
TFE3-205ENST00000495940 KRTAP12-1P59990 96 aa6.36□□□□□ -1.39
TFE3-205ENST00000495940 KRTAP12-2P59991 146 aa6.31□□□□□ -1.4
TFE3-205ENST00000495940 SPINT4Q6UDR6 99 aa6.3□□□□□ -1.4
TFE3-205ENST00000495940 R4GN34 69 aa6.28□□□□□ -1.4
TFE3-205ENST00000495940 MDN1Q9NU22 5596 aa6.28□□□□□ -1.4
TFE3-205ENST00000495940 KMT2DO14686 5537 aa6.21□□□□□ -1.41
TFE3-205ENST00000495940 KRTAP2-3P0C7H8 128 aa6.2□□□□□ -1.42
TFE3-205ENST00000495940 KRTAP5-9P26371 169 aa6.2□□□□□ -1.42
TFE3-205ENST00000495940 KRTAP2-4Q9BYR9 128 aa6.2□□□□□ -1.42
TFE3-205ENST00000495940 PP632Q6XCG6 107 aa6.08□□□□□ -1.44
TFE3-205ENST00000495940 C10orf95Q9H7T3 257 aa6.06□□□□□ -1.44
TFE3-205ENST00000495940 MT1BP07438 61 aa6.03□□□□□ -1.44
TFE3-205ENST00000495940 KRTAP15-1Q3LI76 137 aa6□□□□□ -1.45
TFE3-205ENST00000495940 KRTAP10-5P60370 271 aa5.99□□□□□ -1.45
TFE3-205ENST00000495940 SPRR2EP22531 72 aa5.97□□□□□ -1.45
TFE3-205ENST00000495940 SPRR2BP35325 72 aa5.97□□□□□ -1.45
TFE3-205ENST00000495940 SPRR2AP35326 72 aa5.97□□□□□ -1.45
TFE3-205ENST00000495940 KRTAP2-2Q9BYT5 123 aa5.97□□□□□ -1.45
TFE3-205ENST00000495940 KRTAP2-1Q9BYU5 128 aa5.97□□□□□ -1.45
TFE3-205ENST00000495940 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.46
TFE3-205ENST00000495940 H3BS24 57 aa5.96□□□□□ -1.46
TFE3-205ENST00000495940 CAMK2N1Q7Z7J9 78 aa5.95□□□□□ -1.46
TFE3-205ENST00000495940 SPRR2FQ96RM1 72 aa5.9□□□□□ -1.46
TFE3-205ENST00000495940 KRTAP19-8Q3LI54 63 aa5.86□□□□□ -1.47
TFE3-205ENST00000495940 PLAC4Q8WY50 150 aa5.82□□□□□ -1.48
TFE3-205ENST00000495940 TNP1P09430 55 aa5.81□□□□□ -1.48
TFE3-205ENST00000495940 GPR98Q8WXG9 6306 aa5.81□□□□□ -1.48
TFE3-205ENST00000495940 LCE1AQ5T7P2 110 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms