RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 C7orf65Q6ZTY9 151 aa6.69□□□□□ -1.34
ERCC3-209ENST00000494464 IGKV2D-30A0A075B6S6 120 aa6.67□□□□□ -1.34
ERCC3-209ENST00000494464 HRES1P13985 223 aa6.67□□□□□ -1.34
ERCC3-209ENST00000494464 SMIM26A0A096LP01 95 aa6.66□□□□□ -1.34
ERCC3-209ENST00000494464 MPLKIPQ8TAP9 179 aa6.66□□□□□ -1.34
ERCC3-209ENST00000494464 CRCT1Q9UGL9 99 aa6.66□□□□□ -1.34
ERCC3-209ENST00000494464 FSIP2Q5CZC0 6907 aa6.65□□□□□ -1.35
ERCC3-209ENST00000494464 DMAC1Q96GE9 116 aa6.63□□□□□ -1.35
ERCC3-209ENST00000494464 RBM12B-AS1Q9P1G2 102 aa6.62□□□□□ -1.35
ERCC3-209ENST00000494464 COA5Q86WW8 74 aa6.61□□□□□ -1.35
ERCC3-209ENST00000494464 ACYP2P14621 99 aa6.57□□□□□ -1.36
ERCC3-209ENST00000494464 KRTAP9-8Q9BYQ0 159 aa6.57□□□□□ -1.36
ERCC3-209ENST00000494464 SPINK7P58062 85 aa6.56□□□□□ -1.36
ERCC3-209ENST00000494464 A8MUN3 132 aa6.55□□□□□ -1.36
ERCC3-209ENST00000494464 Q1T7F1 81 aa6.51□□□□□ -1.37
ERCC3-209ENST00000494464 V9GYY9 64 aa6.5□□□□□ -1.37
ERCC3-209ENST00000494464 MT2AP02795 61 aa6.48□□□□□ -1.37
ERCC3-209ENST00000494464 C4orf26Q17RF5 130 aa6.48□□□□□ -1.37
ERCC3-209ENST00000494464 CHKB-CPT1BH3BT56 60 aa6.46□□□□□ -1.37
ERCC3-209ENST00000494464 MT1FP04733 61 aa6.43□□□□□ -1.38
ERCC3-209ENST00000494464 KRTAP3-1Q9BYR8 98 aa6.42□□□□□ -1.38
ERCC3-209ENST00000494464 LINC01558Q9Y6Z2 57 aa6.4□□□□□ -1.39
ERCC3-209ENST00000494464 KRTAP10-10P60014 251 aa6.38□□□□□ -1.39
ERCC3-209ENST00000494464 USH2AO75445 5202 aa6.38□□□□□ -1.39
ERCC3-209ENST00000494464 KRTAP9-3Q9BYQ3 159 aa6.37□□□□□ -1.39
ERCC3-209ENST00000494464 SPTSSBQ8NFR3 76 aa6.35□□□□□ -1.39
ERCC3-209ENST00000494464 PRR15LQ9BU68 103 aa6.33□□□□□ -1.4
ERCC3-209ENST00000494464 PSPHP1O15172 72 aa6.32□□□□□ -1.4
ERCC3-209ENST00000494464 H1FX-AS1Q4G0G2 97 aa6.32□□□□□ -1.4
ERCC3-209ENST00000494464 SSPOA2VEC9 5147 aa6.32□□□□□ -1.4
ERCC3-209ENST00000494464 Q5VV11 94 aa6.31□□□□□ -1.4
ERCC3-209ENST00000494464 A0A1B0GU69 56 aa6.24□□□□□ -1.41
ERCC3-209ENST00000494464 S4R3F8 94 aa6.23□□□□□ -1.41
ERCC3-209ENST00000494464 KRTAP19-1Q8IUB9 90 aa6.22□□□□□ -1.41
ERCC3-209ENST00000494464 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.21□□□□□ -1.41
ERCC3-209ENST00000494464 LCA10Q71F78 164 aa6.2□□□□□ -1.42
ERCC3-209ENST00000494464 FCGBPQ9Y6R7 5405 aaPredicted RBP6.18□□□□□ -1.42
ERCC3-209ENST00000494464 SEC61GP60059 68 aa6.18□□□□□ -1.42
ERCC3-209ENST00000494464 BRK1Q8WUW1 75 aa6.17□□□□□ -1.42
ERCC3-209ENST00000494464 A6NED7 52 aa6.16□□□□□ -1.42
ERCC3-209ENST00000494464 KRTAP19-6Q3LI70 58 aa6.14□□□□□ -1.43
ERCC3-209ENST00000494464 KRTAP9-7A8MTY7 169 aa6.13□□□□□ -1.43
ERCC3-209ENST00000494464 PRO0628Q9UI54 55 aa6.13□□□□□ -1.43
ERCC3-209ENST00000494464 CDC42SE1Q9NRR8 79 aa6.11□□□□□ -1.43
ERCC3-209ENST00000494464 UQCR11O14957 56 aa6.08□□□□□ -1.44
ERCC3-209ENST00000494464 CSAG1Q6PB30 78 aa6.06□□□□□ -1.44
ERCC3-209ENST00000494464 SPATA8Q6RVD6 105 aa6.04□□□□□ -1.44
ERCC3-209ENST00000494464 MIR22HGQ0VDD5 57 aa6.02□□□□□ -1.45
ERCC3-209ENST00000494464 A0A1B0GU33 70 aa6.01□□□□□ -1.45
ERCC3-209ENST00000494464 H0YAA0 97 aa6.01□□□□□ -1.45
ERCC3-209ENST00000494464 A8MU10 97 aa6□□□□□ -1.45
ERCC3-209ENST00000494464 LOC100996750A0A140TA64 210 aa5.98□□□□□ -1.45
ERCC3-209ENST00000494464 KRTAP4-6Q9BYQ5 205 aa5.98□□□□□ -1.45
ERCC3-209ENST00000494464 SPRR2GQ9BYE4 73 aa5.96□□□□□ -1.45
ERCC3-209ENST00000494464 MACF1Q9UPN3 7388 aaKnown RBP5.95□□□□□ -1.46
ERCC3-209ENST00000494464 ADM2Q7Z4H4 148 aa5.93□□□□□ -1.46
ERCC3-209ENST00000494464 KRTAP19-8Q3LI54 63 aa5.93□□□□□ -1.46
ERCC3-209ENST00000494464 MT1BP07438 61 aa5.92□□□□□ -1.46
ERCC3-209ENST00000494464 P0C880 135 aa5.92□□□□□ -1.46
ERCC3-209ENST00000494464 SYNE2Q8WXH0 6885 aaKnown RBP5.91□□□□□ -1.46
ERCC3-209ENST00000494464 SVIPQ8NHG7 77 aa5.9□□□□□ -1.47
ERCC3-209ENST00000494464 CRIPTQ9P021 101 aa5.87□□□□□ -1.47
ERCC3-209ENST00000494464 A6NN06 94 aa5.83□□□□□ -1.48
ERCC3-209ENST00000494464 PMAIP1Q13794 54 aa5.83□□□□□ -1.48
ERCC3-209ENST00000494464 KRTAP13-4Q3LI77 160 aa5.83□□□□□ -1.48
ERCC3-209ENST00000494464 M0QZ58 72 aa5.82□□□□□ -1.48
ERCC3-209ENST00000494464 KRTAP6-3Q3LI67 103 aa5.81□□□□□ -1.48
ERCC3-209ENST00000494464 KRTAP10-5P60370 271 aa5.79□□□□□ -1.48
ERCC3-209ENST00000494464 K7ERS5 55 aa5.74□□□□□ -1.49
ERCC3-209ENST00000494464 R4GN34 69 aa5.72□□□□□ -1.49
ERCC3-209ENST00000494464 A0A0D9SG42 100 aa5.7□□□□□ -1.5
ERCC3-209ENST00000494464 KTN1-AS1Q86SY8 53 aa5.67□□□□□ -1.5
ERCC3-209ENST00000494464 KRTAP12-1P59990 96 aa5.65□□□□□ -1.51
ERCC3-209ENST00000494464 KRTAP12-2P59991 146 aa5.62□□□□□ -1.51
ERCC3-209ENST00000494464 KRTAP5-9P26371 169 aa5.58□□□□□ -1.52
ERCC3-209ENST00000494464 LINC01554Q52M75 96 aa5.57□□□□□ -1.52
ERCC3-209ENST00000494464 SPINT4Q6UDR6 99 aa5.57□□□□□ -1.52
ERCC3-209ENST00000494464 PRO2289Q9P1D8 64 aa5.57□□□□□ -1.52
ERCC3-209ENST00000494464 NEBP20929 6669 aa5.57□□□□□ -1.52
ERCC3-209ENST00000494464 MUC12Q9UKN1 5478 aa5.57□□□□□ -1.52
ERCC3-209ENST00000494464 PLAC4Q8WY50 150 aa5.55□□□□□ -1.52
ERCC3-209ENST00000494464 MT1XP80297 61 aa5.55□□□□□ -1.52
ERCC3-209ENST00000494464 ROMO1P60602 79 aa5.52□□□□□ -1.53
ERCC3-209ENST00000494464 KRTAP4-8Q9BYQ9 185 aa5.48□□□□□ -1.53
ERCC3-209ENST00000494464 KMT2DO14686 5537 aa5.46□□□□□ -1.54
ERCC3-209ENST00000494464 PRAC1Q96KF2 57 aa5.43□□□□□ -1.54
ERCC3-209ENST00000494464 MDN1Q9NU22 5596 aa5.41□□□□□ -1.54
ERCC3-209ENST00000494464 KRTAP20-1Q3LI63 56 aa5.39□□□□□ -1.55
ERCC3-209ENST00000494464 SPRR2FQ96RM1 72 aa5.38□□□□□ -1.55
ERCC3-209ENST00000494464 CAMK2N1Q7Z7J9 78 aa5.37□□□□□ -1.55
ERCC3-209ENST00000494464 KRTAP8-1Q8IUC2 63 aa5.36□□□□□ -1.55
ERCC3-209ENST00000494464 KRTAP25-1Q3LHN0 102 aa5.33□□□□□ -1.56
ERCC3-209ENST00000494464 C10orf95Q9H7T3 257 aa5.31□□□□□ -1.56
ERCC3-209ENST00000494464 SPRR2EP22531 72 aa5.29□□□□□ -1.56
ERCC3-209ENST00000494464 SPRR2BP35325 72 aa5.29□□□□□ -1.56
ERCC3-209ENST00000494464 SPRR2AP35326 72 aa5.29□□□□□ -1.56
ERCC3-209ENST00000494464 KRTAP4-8A0A0G2JLE6 195 aa5.28□□□□□ -1.56
ERCC3-209ENST00000494464 KRTAP10-7P60409 375 aaPredicted RBP5.28□□□□□ -1.56
ERCC3-209ENST00000494464 KRTAP10-12P60413 245 aa5.28□□□□□ -1.56
ERCC3-209ENST00000494464 KRTAP4-12Q9BQ66 201 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms