RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 H3BS24 57 aa3.58□□□□□ -1.84
MSH5-217ENST00000494458 SERP1Q9Y6X1 66 aa3.58□□□□□ -1.84
MSH5-217ENST00000494458 HRES1P13985 223 aa3.57□□□□□ -1.84
MSH5-217ENST00000494458 PRR4Q16378 134 aa3.57□□□□□ -1.84
MSH5-217ENST00000494458 C7orf65Q6ZTY9 151 aa3.57□□□□□ -1.84
MSH5-217ENST00000494458 PCOTHQ58A44 107 aa3.56□□□□□ -1.84
MSH5-217ENST00000494458 PCLOQ9Y6V0 5065 aa3.55□□□□□ -1.84
MSH5-217ENST00000494458 LRP2P98164 4655 aa3.55□□□□□ -1.84
MSH5-217ENST00000494458 SPINK7P58062 85 aa3.55□□□□□ -1.84
MSH5-217ENST00000494458 ATP11AUNQ6ZP68 121 aa3.55□□□□□ -1.84
MSH5-217ENST00000494458 DMAC1Q96GE9 116 aa3.55□□□□□ -1.84
MSH5-217ENST00000494458 MUC17Q685J3 4493 aa3.54□□□□□ -1.84
MSH5-217ENST00000494458 LPAP08519 4548 aa3.54□□□□□ -1.84
MSH5-217ENST00000494458 IGKV2D-30A0A075B6S6 120 aa3.53□□□□□ -1.84
MSH5-217ENST00000494458 KRTAP3-1Q9BYR8 98 aa3.53□□□□□ -1.84
MSH5-217ENST00000494458 MPLKIPQ8TAP9 179 aa3.52□□□□□ -1.85
MSH5-217ENST00000494458 A8MUN3 132 aa3.51□□□□□ -1.85
MSH5-217ENST00000494458 ACYP2P14621 99 aa3.5□□□□□ -1.85
MSH5-217ENST00000494458 COA5Q86WW8 74 aa3.49□□□□□ -1.85
MSH5-217ENST00000494458 HMCN2Q8NDA2 5059 aa3.49□□□□□ -1.85
MSH5-217ENST00000494458 HERC1Q15751 4861 aa3.48□□□□□ -1.85
MSH5-217ENST00000494458 SMIM26A0A096LP01 95 aa3.48□□□□□ -1.85
MSH5-217ENST00000494458 COX6B2Q6YFQ2 88 aa3.48□□□□□ -1.85
MSH5-217ENST00000494458 SEC61BP60468 96 aaKnown RBP3.47□□□□□ -1.85
MSH5-217ENST00000494458 C4orf26Q17RF5 130 aa3.47□□□□□ -1.85
MSH5-217ENST00000494458 Q1T7F1 81 aa3.45□□□□□ -1.86
MSH5-217ENST00000494458 KRTAP4-1Q9BYQ7 146 aa3.45□□□□□ -1.86
MSH5-217ENST00000494458 KRTAP19-2Q3LHN2 52 aa3.44□□□□□ -1.86
MSH5-217ENST00000494458 LINC01558Q9Y6Z2 57 aa3.41□□□□□ -1.86
MSH5-217ENST00000494458 V9GYY9 64 aa3.4□□□□□ -1.87
MSH5-217ENST00000494458 H1FX-AS1Q4G0G2 97 aa3.39□□□□□ -1.87
MSH5-217ENST00000494458 CHKB-CPT1BH3BT56 60 aa3.36□□□□□ -1.87
MSH5-217ENST00000494458 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
MSH5-217ENST00000494458 RBM12B-AS1Q9P1G2 102 aa3.36□□□□□ -1.87
MSH5-217ENST00000494458 FLGP20930 4061 aaPredicted RBP3.35□□□□□ -1.87
MSH5-217ENST00000494458 SPTSSBQ8NFR3 76 aa3.35□□□□□ -1.87
MSH5-217ENST00000494458 LCA10Q71F78 164 aa3.34□□□□□ -1.87
MSH5-217ENST00000494458 Q5VV11 94 aa3.33□□□□□ -1.88
MSH5-217ENST00000494458 SVIPQ8NHG7 77 aa3.33□□□□□ -1.88
MSH5-217ENST00000494458 MUC2Q02817 5179 aa3.32□□□□□ -1.88
MSH5-217ENST00000494458 S4R3F8 94 aa3.32□□□□□ -1.88
MSH5-217ENST00000494458 H0YAA0 97 aa3.29□□□□□ -1.88
MSH5-217ENST00000494458 PSPHP1O15172 72 aa3.29□□□□□ -1.88
MSH5-217ENST00000494458 PRR15LQ9BU68 103 aa3.29□□□□□ -1.88
MSH5-217ENST00000494458 RNF213Q63HN8 5207 aa3.28□□□□□ -1.88
MSH5-217ENST00000494458 KRTAP10-6P60371 365 aaPredicted RBP3.28□□□□□ -1.88
MSH5-217ENST00000494458 UBR4Q5T4S7 5183 aa3.27□□□□□ -1.89
MSH5-217ENST00000494458 A0A1B0GU69 56 aa3.27□□□□□ -1.89
MSH5-217ENST00000494458 CSAG1Q6PB30 78 aa3.27□□□□□ -1.89
MSH5-217ENST00000494458 SEC61GP60059 68 aa3.23□□□□□ -1.89
MSH5-217ENST00000494458 SPATA8Q6RVD6 105 aa3.23□□□□□ -1.89
MSH5-217ENST00000494458 UQCR11O14957 56 aa3.2□□□□□ -1.9
MSH5-217ENST00000494458 CDC42SE1Q9NRR8 79 aa3.2□□□□□ -1.9
MSH5-217ENST00000494458 A0A1B0GU33 70 aa3.19□□□□□ -1.9
MSH5-217ENST00000494458 P0C880 135 aa3.19□□□□□ -1.9
MSH5-217ENST00000494458 MT1HP80294 61 aa3.19□□□□□ -1.9
MSH5-217ENST00000494458 KRTAP5-11Q6L8G4 156 aa3.19□□□□□ -1.9
MSH5-217ENST00000494458 A6NED7 52 aa3.18□□□□□ -1.9
MSH5-217ENST00000494458 FAT4Q6V0I7 4981 aa3.18□□□□□ -1.9
MSH5-217ENST00000494458 ADM2Q7Z4H4 148 aa3.17□□□□□ -1.9
MSH5-217ENST00000494458 A8MU10 97 aa3.16□□□□□ -1.9
MSH5-217ENST00000494458 KRTAP15-1Q3LI76 137 aa3.16□□□□□ -1.9
MSH5-217ENST00000494458 PRO0628Q9UI54 55 aa3.16□□□□□ -1.9
MSH5-217ENST00000494458 M0QZ58 72 aa3.15□□□□□ -1.91
MSH5-217ENST00000494458 MIR22HGQ0VDD5 57 aa3.15□□□□□ -1.91
MSH5-217ENST00000494458 KRTAP13-4Q3LI77 160 aa3.15□□□□□ -1.91
MSH5-217ENST00000494458 BRK1Q8WUW1 75 aa3.14□□□□□ -1.91
MSH5-217ENST00000494458 KRTAP10-7P60409 375 aaPredicted RBP3.11□□□□□ -1.91
MSH5-217ENST00000494458 CRIPTQ9P021 101 aa3.11□□□□□ -1.91
MSH5-217ENST00000494458 MT2AP02795 61 aa3.08□□□□□ -1.92
MSH5-217ENST00000494458 A6NN06 94 aa3.06□□□□□ -1.92
MSH5-217ENST00000494458 SPRR2GQ9BYE4 73 aa3.06□□□□□ -1.92
MSH5-217ENST00000494458 MT1FP04733 61 aa3.05□□□□□ -1.92
MSH5-217ENST00000494458 R4GN34 69 aa3.05□□□□□ -1.92
MSH5-217ENST00000494458 M0R2T5 61 aa3.04□□□□□ -1.92
MSH5-217ENST00000494458 KRTAP12-1P59990 96 aa3.04□□□□□ -1.92
MSH5-217ENST00000494458 KRTAP12-2P59991 146 aa3.01□□□□□ -1.93
MSH5-217ENST00000494458 PMAIP1Q13794 54 aa3□□□□□ -1.93
MSH5-217ENST00000494458 A0A0D9SG42 100 aa2.99□□□□□ -1.93
MSH5-217ENST00000494458 KRTAP10-10P60014 251 aa2.99□□□□□ -1.93
MSH5-217ENST00000494458 KRTAP19-8Q3LI54 63 aa2.99□□□□□ -1.93
MSH5-217ENST00000494458 K7ERS5 55 aa2.97□□□□□ -1.93
MSH5-217ENST00000494458 LCE1AQ5T7P2 110 aa2.97□□□□□ -1.93
MSH5-217ENST00000494458 LINC01554Q52M75 96 aa2.93□□□□□ -1.94
MSH5-217ENST00000494458 MT1BP07438 61 aa2.92□□□□□ -1.94
MSH5-217ENST00000494458 SPINT4Q6UDR6 99 aa2.92□□□□□ -1.94
MSH5-217ENST00000494458 KTN1-AS1Q86SY8 53 aa2.91□□□□□ -1.94
MSH5-217ENST00000494458 ROMO1P60602 79 aa2.9□□□□□ -1.95
MSH5-217ENST00000494458 C10orf95Q9H7T3 257 aa2.88□□□□□ -1.95
MSH5-217ENST00000494458 LCE1EQ5T753 118 aa2.87□□□□□ -1.95
MSH5-217ENST00000494458 KRTAP5-1Q6L8H4 278 aa2.87□□□□□ -1.95
MSH5-217ENST00000494458 PLAC4Q8WY50 150 aa2.86□□□□□ -1.95
MSH5-217ENST00000494458 KRTAP5-9P26371 169 aa2.83□□□□□ -1.96
MSH5-217ENST00000494458 KRTAP10-5P60370 271 aa2.83□□□□□ -1.96
MSH5-217ENST00000494458 MT1XP80297 61 aa2.83□□□□□ -1.96
MSH5-217ENST00000494458 KRTAP5-4Q6L8H1 288 aa2.82□□□□□ -1.96
MSH5-217ENST00000494458 CAMK2N1Q7Z7J9 78 aa2.82□□□□□ -1.96
MSH5-217ENST00000494458 KRTAP2-2Q9BYT5 123 aa2.81□□□□□ -1.96
MSH5-217ENST00000494458 USH2AO75445 5202 aa2.81□□□□□ -1.96
MSH5-217ENST00000494458 KRTAP25-1Q3LHN0 102 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 709.3 ms