RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 BRK1Q8WUW1 75 aa5.51□□□□□ -1.53
CLCN6-208ENST00000494028 PRO0628Q9UI54 55 aa5.47□□□□□ -1.53
CLCN6-208ENST00000494028 A0A1B0GU69 56 aa5.44□□□□□ -1.54
CLCN6-208ENST00000494028 LCE2AQ5TA79 106 aaPredicted RBP5.44□□□□□ -1.54
CLCN6-208ENST00000494028 SPTSSBQ8NFR3 76 aa5.44□□□□□ -1.54
CLCN6-208ENST00000494028 A6NED7 52 aa5.43□□□□□ -1.54
CLCN6-208ENST00000494028 SVIPQ8NHG7 77 aa5.43□□□□□ -1.54
CLCN6-208ENST00000494028 A8MU10 97 aa5.42□□□□□ -1.54
CLCN6-208ENST00000494028 LPAP08519 4548 aa5.4□□□□□ -1.55
CLCN6-208ENST00000494028 LRP2P98164 4655 aa5.39□□□□□ -1.55
CLCN6-208ENST00000494028 LCA10Q71F78 164 aa5.38□□□□□ -1.55
CLCN6-208ENST00000494028 CDC42SE1Q9NRR8 79 aa5.38□□□□□ -1.55
CLCN6-208ENST00000494028 MUC17Q685J3 4493 aa5.36□□□□□ -1.55
CLCN6-208ENST00000494028 SEC61BP60468 96 aaKnown RBP5.35□□□□□ -1.55
CLCN6-208ENST00000494028 S4R3F8 94 aa5.35□□□□□ -1.55
CLCN6-208ENST00000494028 H1FX-AS1Q4G0G2 97 aa5.33□□□□□ -1.56
CLCN6-208ENST00000494028 SEC61GP60059 68 aa5.31□□□□□ -1.56
CLCN6-208ENST00000494028 KRTAP4-1Q9BYQ7 146 aa5.31□□□□□ -1.56
CLCN6-208ENST00000494028 RBM12B-AS1Q9P1G2 102 aa5.31□□□□□ -1.56
CLCN6-208ENST00000494028 UBR4Q5T4S7 5183 aa5.3□□□□□ -1.56
CLCN6-208ENST00000494028 LOC100996750A0A140TA64 210 aa5.29□□□□□ -1.56
CLCN6-208ENST00000494028 UQCR11O14957 56 aa5.29□□□□□ -1.56
CLCN6-208ENST00000494028 LCE2CQ5TA81 110 aa5.29□□□□□ -1.56
CLCN6-208ENST00000494028 KRTAP4-6Q9BYQ5 205 aa5.29□□□□□ -1.56
CLCN6-208ENST00000494028 MIR22HGQ0VDD5 57 aa5.27□□□□□ -1.57
CLCN6-208ENST00000494028 SPATA8Q6RVD6 105 aa5.27□□□□□ -1.57
CLCN6-208ENST00000494028 H0YAA0 97 aa5.23□□□□□ -1.57
CLCN6-208ENST00000494028 KRTAP10-6P60371 365 aaPredicted RBP5.22□□□□□ -1.57
CLCN6-208ENST00000494028 A0A1B0GU33 70 aa5.21□□□□□ -1.58
CLCN6-208ENST00000494028 KRTAP19-2Q3LHN2 52 aa5.21□□□□□ -1.58
CLCN6-208ENST00000494028 RNF213Q63HN8 5207 aa5.21□□□□□ -1.58
CLCN6-208ENST00000494028 A6NN06 94 aa5.2□□□□□ -1.58
CLCN6-208ENST00000494028 LORP23490 312 aaPredicted RBP5.16□□□□□ -1.58
CLCN6-208ENST00000494028 P0C880 135 aa5.15□□□□□ -1.59
CLCN6-208ENST00000494028 PMAIP1Q13794 54 aa5.15□□□□□ -1.59
CLCN6-208ENST00000494028 CSAG1Q6PB30 78 aa5.15□□□□□ -1.59
CLCN6-208ENST00000494028 KRTAP13-4Q3LI77 160 aa5.13□□□□□ -1.59
CLCN6-208ENST00000494028 ADM2Q7Z4H4 148 aa5.13□□□□□ -1.59
CLCN6-208ENST00000494028 KTN1-AS1Q86SY8 53 aa5.07□□□□□ -1.6
CLCN6-208ENST00000494028 MUC2Q02817 5179 aa5.06□□□□□ -1.6
CLCN6-208ENST00000494028 FLGP20930 4061 aaPredicted RBP4.99□□□□□ -1.61
CLCN6-208ENST00000494028 A0A0D9SG42 100 aa4.99□□□□□ -1.61
CLCN6-208ENST00000494028 M0QZ58 72 aa4.97□□□□□ -1.61
CLCN6-208ENST00000494028 FAT4Q6V0I7 4981 aa4.97□□□□□ -1.61
CLCN6-208ENST00000494028 K7ERS5 55 aa4.94□□□□□ -1.62
CLCN6-208ENST00000494028 KRTAP12-1P59990 96 aa4.93□□□□□ -1.62
CLCN6-208ENST00000494028 KRTAP12-2P59991 146 aa4.92□□□□□ -1.62
CLCN6-208ENST00000494028 PRAC1Q96KF2 57 aa4.91□□□□□ -1.62
CLCN6-208ENST00000494028 R4GN34 69 aa4.9□□□□□ -1.63
CLCN6-208ENST00000494028 MT1HP80294 61 aa4.88□□□□□ -1.63
CLCN6-208ENST00000494028 SPINT4Q6UDR6 99 aa4.84□□□□□ -1.63
CLCN6-208ENST00000494028 LINC01554Q52M75 96 aa4.83□□□□□ -1.64
CLCN6-208ENST00000494028 ROMO1P60602 79 aa4.82□□□□□ -1.64
CLCN6-208ENST00000494028 KRTAP4-8Q9BYQ9 185 aa4.8□□□□□ -1.64
CLCN6-208ENST00000494028 CRIPTQ9P021 101 aa4.79□□□□□ -1.64
CLCN6-208ENST00000494028 M0R2T5 61 aa4.76□□□□□ -1.65
CLCN6-208ENST00000494028 MT2AP02795 61 aa4.74□□□□□ -1.65
CLCN6-208ENST00000494028 MT1FP04733 61 aa4.73□□□□□ -1.65
CLCN6-208ENST00000494028 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.72□□□□□ -1.65
CLCN6-208ENST00000494028 KRTAP25-1Q3LHN0 102 aa4.72□□□□□ -1.65
CLCN6-208ENST00000494028 KRTAP9-8Q9BYQ0 159 aa4.71□□□□□ -1.66
CLCN6-208ENST00000494028 KRTAP9-2Q9BYQ4 174 aa4.71□□□□□ -1.66
CLCN6-208ENST00000494028 KRTAP19-1Q8IUB9 90 aa4.7□□□□□ -1.66
CLCN6-208ENST00000494028 SPRR2GQ9BYE4 73 aa4.7□□□□□ -1.66
CLCN6-208ENST00000494028 KRTAP9-6A0A140TA67 174 aa4.69□□□□□ -1.66
CLCN6-208ENST00000494028 C10orf95Q9H7T3 257 aa4.64□□□□□ -1.67
CLCN6-208ENST00000494028 KRTAP10-10P60014 251 aa4.63□□□□□ -1.67
CLCN6-208ENST00000494028 CAMK2N1Q7Z7J9 78 aa4.61□□□□□ -1.67
CLCN6-208ENST00000494028 KRTAP19-8Q3LI54 63 aa4.58□□□□□ -1.68
CLCN6-208ENST00000494028 LCE3BQ5TA77 95 aa4.58□□□□□ -1.68
CLCN6-208ENST00000494028 KRTAP4-12Q9BQ66 201 aa4.54□□□□□ -1.68
CLCN6-208ENST00000494028 MT1BP07438 61 aa4.52□□□□□ -1.69
CLCN6-208ENST00000494028 KRTAP9-3Q9BYQ3 159 aa4.52□□□□□ -1.69
CLCN6-208ENST00000494028 PLAC4Q8WY50 150 aa4.51□□□□□ -1.69
CLCN6-208ENST00000494028 KRTAP9-9Q9BYP9 154 aa4.48□□□□□ -1.69
CLCN6-208ENST00000494028 KRTAP9-4Q9BYQ2 154 aa4.48□□□□□ -1.69
CLCN6-208ENST00000494028 H3BS24 57 aa4.45□□□□□ -1.7
CLCN6-208ENST00000494028 KRTAP4-8A0A0G2JLE6 195 aa4.44□□□□□ -1.7
CLCN6-208ENST00000494028 TNP1P09430 55 aa4.41□□□□□ -1.7
CLCN6-208ENST00000494028 MT1XP80297 61 aa4.4□□□□□ -1.71
CLCN6-208ENST00000494028 KRTAP10-5P60370 271 aa4.39□□□□□ -1.71
CLCN6-208ENST00000494028 USH2AO75445 5202 aa4.39□□□□□ -1.71
CLCN6-208ENST00000494028 PP632Q6XCG6 107 aa4.38□□□□□ -1.71
CLCN6-208ENST00000494028 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
CLCN6-208ENST00000494028 SSPOA2VEC9 5147 aa4.3□□□□□ -1.72
CLCN6-208ENST00000494028 KRTAP4-7Q9BYR0 210 aa4.29□□□□□ -1.72
CLCN6-208ENST00000494028 FSIP2Q5CZC0 6907 aa4.27□□□□□ -1.73
CLCN6-208ENST00000494028 LCE1DQ5T752 114 aa4.27□□□□□ -1.73
CLCN6-208ENST00000494028 LCE3AQ5TA76 89 aa4.27□□□□□ -1.73
CLCN6-208ENST00000494028 PRO2289Q9P1D8 64 aa4.25□□□□□ -1.73
CLCN6-208ENST00000494028 KRTAP10-7P60409 375 aaPredicted RBP4.23□□□□□ -1.73
CLCN6-208ENST00000494028 KRTAP10-12P60413 245 aa4.23□□□□□ -1.73
CLCN6-208ENST00000494028 KRTAP15-1Q3LI76 137 aa4.23□□□□□ -1.73
CLCN6-208ENST00000494028 CRCT1Q9UGL9 99 aa4.23□□□□□ -1.73
CLCN6-208ENST00000494028 KRTAP8-1Q8IUC2 63 aa4.17□□□□□ -1.74
CLCN6-208ENST00000494028 KRTAP19-6Q3LI70 58 aa4.16□□□□□ -1.74
CLCN6-208ENST00000494028 KRTAP4-9Q9BYQ8 210 aa4.16□□□□□ -1.74
CLCN6-208ENST00000494028 FCGBPQ9Y6R7 5405 aaPredicted RBP4.15□□□□□ -1.75
CLCN6-208ENST00000494028 KRTAP4-2Q9BYR5 136 aa4.11□□□□□ -1.75
CLCN6-208ENST00000494028 KRTAP12-3P60328 96 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms