RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 Q5W150 140 aa3.46□□□□□ -1.86
TRA2B-216ENST00000493864 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.46□□□□□ -1.86
TRA2B-216ENST00000493864 PCOTHQ58A44 107 aa3.45□□□□□ -1.86
TRA2B-216ENST00000493864 ATP11AUNQ6ZP68 121 aa3.45□□□□□ -1.86
TRA2B-216ENST00000493864 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
TRA2B-216ENST00000493864 ZCCHC13Q8WW36 166 aaKnown RBP3.44□□□□□ -1.86
TRA2B-216ENST00000493864 TP53AIP1Q9HCN2 124 aa3.44□□□□□ -1.86
TRA2B-216ENST00000493864 UQCRQO14949 82 aa3.42□□□□□ -1.86
TRA2B-216ENST00000493864 FAT4Q6V0I7 4981 aa3.41□□□□□ -1.86
TRA2B-216ENST00000493864 TRAV7A0A075B6U4 112 aa3.41□□□□□ -1.86
TRA2B-216ENST00000493864 ATOX1O00244 68 aa3.41□□□□□ -1.86
TRA2B-216ENST00000493864 KRTAP4-1Q9BYQ7 146 aa3.41□□□□□ -1.86
TRA2B-216ENST00000493864 H0Y9P7 68 aa3.4□□□□□ -1.87
TRA2B-216ENST00000493864 SMIM20Q8N5G0 67 aa3.4□□□□□ -1.87
TRA2B-216ENST00000493864 TRAV22A0A0B4J277 110 aa3.39□□□□□ -1.87
TRA2B-216ENST00000493864 SPINK7P58062 85 aa3.38□□□□□ -1.87
TRA2B-216ENST00000493864 C5orf47Q569G3 176 aa3.38□□□□□ -1.87
TRA2B-216ENST00000493864 SERP2Q8N6R1 65 aa3.38□□□□□ -1.87
TRA2B-216ENST00000493864 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
TRA2B-216ENST00000493864 LINC00208Q96KT6 92 aa3.37□□□□□ -1.87
TRA2B-216ENST00000493864 MP68P56378 58 aa3.36□□□□□ -1.87
TRA2B-216ENST00000493864 C1orf64Q8NEQ6 169 aa3.36□□□□□ -1.87
TRA2B-216ENST00000493864 ANAPC13Q9BS18 74 aa3.36□□□□□ -1.87
TRA2B-216ENST00000493864 CYP4F30PQ9H0H9 118 aa3.36□□□□□ -1.87
TRA2B-216ENST00000493864 LOC101927531A0A1B0GV80 90 aa3.35□□□□□ -1.87
TRA2B-216ENST00000493864 COX7CP15954 63 aa3.35□□□□□ -1.87
TRA2B-216ENST00000493864 A0A0U1RQV1 116 aa3.34□□□□□ -1.87
TRA2B-216ENST00000493864 C7orf65Q6ZTY9 151 aa3.34□□□□□ -1.87
TRA2B-216ENST00000493864 C20orf197Q8N268 126 aa3.34□□□□□ -1.87
TRA2B-216ENST00000493864 H3BPC8 53 aa3.33□□□□□ -1.88
TRA2B-216ENST00000493864 HRES1P13985 223 aa3.33□□□□□ -1.88
TRA2B-216ENST00000493864 KLKP1Q107X0 134 aa3.33□□□□□ -1.88
TRA2B-216ENST00000493864 SNURFQ9Y675 71 aa3.33□□□□□ -1.88
TRA2B-216ENST00000493864 CCDC179H3BU77 68 aa3.31□□□□□ -1.88
TRA2B-216ENST00000493864 C4orf26Q17RF5 130 aa3.31□□□□□ -1.88
TRA2B-216ENST00000493864 KRTAP12-2P59991 146 aa3.3□□□□□ -1.88
TRA2B-216ENST00000493864 FLGP20930 4061 aaPredicted RBP3.29□□□□□ -1.88
TRA2B-216ENST00000493864 KRTAP19-2Q3LHN2 52 aa3.29□□□□□ -1.88
TRA2B-216ENST00000493864 CYSTM1Q9H1C7 97 aa3.28□□□□□ -1.88
TRA2B-216ENST00000493864 COX6B2Q6YFQ2 88 aa3.27□□□□□ -1.89
TRA2B-216ENST00000493864 RBM12B-AS1Q9P1G2 102 aa3.27□□□□□ -1.89
TRA2B-216ENST00000493864 FAM236DA0A1B0GTK5 79 aa3.26□□□□□ -1.89
TRA2B-216ENST00000493864 FAM236CP0DP71 79 aa3.26□□□□□ -1.89
TRA2B-216ENST00000493864 SEC61GP60059 68 aa3.26□□□□□ -1.89
TRA2B-216ENST00000493864 H7BZZ5 65 aa3.24□□□□□ -1.89
TRA2B-216ENST00000493864 NDUFC1O43677 76 aa3.23□□□□□ -1.89
TRA2B-216ENST00000493864 H1FX-AS1Q4G0G2 97 aa3.23□□□□□ -1.89
TRA2B-216ENST00000493864 SPANXA2-OT1Q8N9U9 137 aa3.21□□□□□ -1.9
TRA2B-216ENST00000493864 DMAC1Q96GE9 116 aa3.2□□□□□ -1.9
TRA2B-216ENST00000493864 A8MUN3 132 aa3.19□□□□□ -1.9
TRA2B-216ENST00000493864 ACYP2P14621 99 aa3.18□□□□□ -1.9
TRA2B-216ENST00000493864 MT1HP80294 61 aa3.18□□□□□ -1.9
TRA2B-216ENST00000493864 LCA10Q71F78 164 aa3.16□□□□□ -1.9
TRA2B-216ENST00000493864 S4R3F8 94 aa3.16□□□□□ -1.9
TRA2B-216ENST00000493864 TMEM258P61165 79 aa3.15□□□□□ -1.91
TRA2B-216ENST00000493864 M0R2T5 61 aa3.14□□□□□ -1.91
TRA2B-216ENST00000493864 FSIP2Q5CZC0 6907 aa3.14□□□□□ -1.91
TRA2B-216ENST00000493864 ATP5EP56381 51 aaPredicted RBP3.13□□□□□ -1.91
TRA2B-216ENST00000493864 COA5Q86WW8 74 aa3.13□□□□□ -1.91
TRA2B-216ENST00000493864 CSAG1Q6PB30 78 aa3.12□□□□□ -1.91
TRA2B-216ENST00000493864 CHKB-CPT1BH3BT56 60 aa3.11□□□□□ -1.91
TRA2B-216ENST00000493864 SERP1Q9Y6X1 66 aa3.08□□□□□ -1.92
TRA2B-216ENST00000493864 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
TRA2B-216ENST00000493864 SPTSSBQ8NFR3 76 aa3.07□□□□□ -1.92
TRA2B-216ENST00000493864 MT2AP02795 61 aa3.04□□□□□ -1.92
TRA2B-216ENST00000493864 ADM2Q7Z4H4 148 aa3.03□□□□□ -1.92
TRA2B-216ENST00000493864 USH2AO75445 5202 aa3.02□□□□□ -1.93
TRA2B-216ENST00000493864 MT1FP04733 61 aa3.02□□□□□ -1.93
TRA2B-216ENST00000493864 RPS28P62857 69 aaKnown RBP3.02□□□□□ -1.93
TRA2B-216ENST00000493864 H0YAA0 97 aa3.01□□□□□ -1.93
TRA2B-216ENST00000493864 KRTAP10-10P60014 251 aa3.01□□□□□ -1.93
TRA2B-216ENST00000493864 CRCT1Q9UGL9 99 aa3.01□□□□□ -1.93
TRA2B-216ENST00000493864 P0C880 135 aa3□□□□□ -1.93
TRA2B-216ENST00000493864 SSPOA2VEC9 5147 aa2.99□□□□□ -1.93
TRA2B-216ENST00000493864 SMIM26A0A096LP01 95 aa2.98□□□□□ -1.93
TRA2B-216ENST00000493864 LINC01558Q9Y6Z2 57 aa2.97□□□□□ -1.93
TRA2B-216ENST00000493864 LCE3AQ5TA76 89 aa2.96□□□□□ -1.94
TRA2B-216ENST00000493864 A0A1B0GU69 56 aa2.95□□□□□ -1.94
TRA2B-216ENST00000493864 V9GYY9 64 aa2.95□□□□□ -1.94
TRA2B-216ENST00000493864 Q1T7F1 81 aa2.94□□□□□ -1.94
TRA2B-216ENST00000493864 PRR15LQ9BU68 103 aa2.93□□□□□ -1.94
TRA2B-216ENST00000493864 A0A1B0GU33 70 aa2.92□□□□□ -1.94
TRA2B-216ENST00000493864 CAMK2N1Q7Z7J9 78 aa2.92□□□□□ -1.94
TRA2B-216ENST00000493864 CRIPTQ9P021 101 aa2.92□□□□□ -1.94
TRA2B-216ENST00000493864 M0QZ58 72 aa2.91□□□□□ -1.94
TRA2B-216ENST00000493864 PSPHP1O15172 72 aa2.91□□□□□ -1.94
TRA2B-216ENST00000493864 KRTAP13-4Q3LI77 160 aa2.9□□□□□ -1.95
TRA2B-216ENST00000493864 SPRR2GQ9BYE4 73 aa2.9□□□□□ -1.95
TRA2B-216ENST00000493864 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
TRA2B-216ENST00000493864 R4GN34 69 aa2.9□□□□□ -1.95
TRA2B-216ENST00000493864 FCGBPQ9Y6R7 5405 aaPredicted RBP2.9□□□□□ -1.95
TRA2B-216ENST00000493864 Q5VV11 94 aa2.88□□□□□ -1.95
TRA2B-216ENST00000493864 SPATA8Q6RVD6 105 aa2.88□□□□□ -1.95
TRA2B-216ENST00000493864 LINC01554Q52M75 96 aa2.87□□□□□ -1.95
TRA2B-216ENST00000493864 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
TRA2B-216ENST00000493864 KRTAP19-8Q3LI54 63 aa2.86□□□□□ -1.95
TRA2B-216ENST00000493864 A0A0D9SG42 100 aa2.84□□□□□ -1.95
TRA2B-216ENST00000493864 UQCR11O14957 56 aa2.84□□□□□ -1.95
TRA2B-216ENST00000493864 MT1BP07438 61 aa2.84□□□□□ -1.95
TRA2B-216ENST00000493864 MACF1Q9UPN3 7388 aaKnown RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms