RNA–Protein interactions for RNA: ENST00000493673.1

PSMB4-205, Transcript of proteasome subunit beta 4, humanhuman

TSL 5

Gene PSMB4, Length 1,650 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-205ENST00000493673 USH2AO75445 5202 aa7.41□□□□□ -1.22
PSMB4-205ENST00000493673 FAM236AA0A1B0GUQ0 79 aa7.4□□□□□ -1.23
PSMB4-205ENST00000493673 FAM236BA0A1B0GV22 79 aa7.4□□□□□ -1.23
PSMB4-205ENST00000493673 A8MUN3 132 aa7.39□□□□□ -1.23
PSMB4-205ENST00000493673 LOC100996750A0A140TA64 210 aa7.38□□□□□ -1.23
PSMB4-205ENST00000493673 KRTAP4-6Q9BYQ5 205 aa7.38□□□□□ -1.23
PSMB4-205ENST00000493673 KLKP1Q107X0 134 aa7.38□□□□□ -1.23
PSMB4-205ENST00000493673 NDUFC1O43677 76 aa7.35□□□□□ -1.23
PSMB4-205ENST00000493673 SMIM20Q8N5G0 67 aa7.35□□□□□ -1.23
PSMB4-205ENST00000493673 ANAPC13Q9BS18 74 aa7.31□□□□□ -1.24
PSMB4-205ENST00000493673 TRAV7A0A075B6U4 112 aa7.28□□□□□ -1.24
PSMB4-205ENST00000493673 SSPOA2VEC9 5147 aa7.28□□□□□ -1.24
PSMB4-205ENST00000493673 KRTAP19-1Q8IUB9 90 aa7.25□□□□□ -1.25
PSMB4-205ENST00000493673 CCDC179H3BU77 68 aa7.2□□□□□ -1.26
PSMB4-205ENST00000493673 DMAC1Q96GE9 116 aa7.19□□□□□ -1.26
PSMB4-205ENST00000493673 CRIPTQ9P021 101 aa7.19□□□□□ -1.26
PSMB4-205ENST00000493673 H0YAA0 97 aa7.19□□□□□ -1.26
PSMB4-205ENST00000493673 KRTAP19-6Q3LI70 58 aa7.16□□□□□ -1.26
PSMB4-205ENST00000493673 SPRR2GQ9BYE4 73 aa7.16□□□□□ -1.26
PSMB4-205ENST00000493673 FCGBPQ9Y6R7 5405 aaPredicted RBP7.14□□□□□ -1.27
PSMB4-205ENST00000493673 ACYP2P14621 99 aa7.13□□□□□ -1.27
PSMB4-205ENST00000493673 Q5VV11 94 aa7.12□□□□□ -1.27
PSMB4-205ENST00000493673 ADM2Q7Z4H4 148 aa7.12□□□□□ -1.27
PSMB4-205ENST00000493673 COX7CP15954 63 aa7.12□□□□□ -1.27
PSMB4-205ENST00000493673 SERP2Q8N6R1 65 aa7.09□□□□□ -1.27
PSMB4-205ENST00000493673 SNURFQ9Y675 71 aa7.09□□□□□ -1.27
PSMB4-205ENST00000493673 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.08□□□□□ -1.28
PSMB4-205ENST00000493673 KRTAP19-8Q3LI54 63 aa7.08□□□□□ -1.28
PSMB4-205ENST00000493673 C20orf197Q8N268 126 aa7.06□□□□□ -1.28
PSMB4-205ENST00000493673 SPTSSBQ8NFR3 76 aa7.05□□□□□ -1.28
PSMB4-205ENST00000493673 MT1BP07438 61 aa7.02□□□□□ -1.29
PSMB4-205ENST00000493673 CYSTM1Q9H1C7 97 aa7.02□□□□□ -1.29
PSMB4-205ENST00000493673 CHKB-CPT1BH3BT56 60 aa7.01□□□□□ -1.29
PSMB4-205ENST00000493673 SPANXA2-OT1Q8N9U9 137 aa7□□□□□ -1.29
PSMB4-205ENST00000493673 A6NN06 94 aa6.96□□□□□ -1.29
PSMB4-205ENST00000493673 KRTAP9-7A8MTY7 169 aa6.96□□□□□ -1.3
PSMB4-205ENST00000493673 R4GN34 69 aa6.96□□□□□ -1.3
PSMB4-205ENST00000493673 P0C880 135 aa6.93□□□□□ -1.3
PSMB4-205ENST00000493673 TMEM258P61165 79 aa6.9□□□□□ -1.31
PSMB4-205ENST00000493673 M0QZ58 72 aa6.88□□□□□ -1.31
PSMB4-205ENST00000493673 H7BZZ5 65 aa6.87□□□□□ -1.31
PSMB4-205ENST00000493673 PLAC4Q8WY50 150 aa6.87□□□□□ -1.31
PSMB4-205ENST00000493673 KRTAP10-5P60370 271 aa6.86□□□□□ -1.31
PSMB4-205ENST00000493673 MACF1Q9UPN3 7388 aaKnown RBP6.83□□□□□ -1.32
PSMB4-205ENST00000493673 LINC01554Q52M75 96 aa6.79□□□□□ -1.32
PSMB4-205ENST00000493673 RPS28P62857 69 aaKnown RBP6.78□□□□□ -1.32
PSMB4-205ENST00000493673 PRO2289Q9P1D8 64 aa6.77□□□□□ -1.32
PSMB4-205ENST00000493673 COA5Q86WW8 74 aa6.77□□□□□ -1.33
PSMB4-205ENST00000493673 SYNE2Q8WXH0 6885 aaKnown RBP6.75□□□□□ -1.33
PSMB4-205ENST00000493673 KRTAP4-8Q9BYQ9 185 aa6.74□□□□□ -1.33
PSMB4-205ENST00000493673 KRTAP6-3Q3LI67 103 aa6.72□□□□□ -1.33
PSMB4-205ENST00000493673 ATP5EP56381 51 aaPredicted RBP6.71□□□□□ -1.33
PSMB4-205ENST00000493673 SEC61GP60059 68 aa6.7□□□□□ -1.34
PSMB4-205ENST00000493673 SERP1Q9Y6X1 66 aa6.68□□□□□ -1.34
PSMB4-205ENST00000493673 MT1XP80297 61 aa6.63□□□□□ -1.35
PSMB4-205ENST00000493673 SMIM26A0A096LP01 95 aa6.52□□□□□ -1.37
PSMB4-205ENST00000493673 KRTAP13-4Q3LI77 160 aa6.52□□□□□ -1.37
PSMB4-205ENST00000493673 A0A1B0GU33 70 aa6.51□□□□□ -1.37
PSMB4-205ENST00000493673 KRTAP12-2P59991 146 aa6.48□□□□□ -1.37
PSMB4-205ENST00000493673 A0A1B0GU69 56 aa6.47□□□□□ -1.37
PSMB4-205ENST00000493673 CAMK2N1Q7Z7J9 78 aa6.45□□□□□ -1.38
PSMB4-205ENST00000493673 KRTAP5-9P26371 169 aa6.44□□□□□ -1.38
PSMB4-205ENST00000493673 A0A0D9SG42 100 aa6.42□□□□□ -1.38
PSMB4-205ENST00000493673 SPATA8Q6RVD6 105 aa6.42□□□□□ -1.38
PSMB4-205ENST00000493673 LCE3BQ5TA77 95 aa6.41□□□□□ -1.38
PSMB4-205ENST00000493673 KRTAP8-1Q8IUC2 63 aa6.39□□□□□ -1.39
PSMB4-205ENST00000493673 KRTAP4-12Q9BQ66 201 aa6.39□□□□□ -1.39
PSMB4-205ENST00000493673 PRR15LQ9BU68 103 aa6.37□□□□□ -1.39
PSMB4-205ENST00000493673 Q1T7F1 81 aa6.36□□□□□ -1.39
PSMB4-205ENST00000493673 MUC12Q9UKN1 5478 aa6.36□□□□□ -1.39
PSMB4-205ENST00000493673 KMT2DO14686 5537 aa6.35□□□□□ -1.39
PSMB4-205ENST00000493673 SPINT4Q6UDR6 99 aa6.35□□□□□ -1.39
PSMB4-205ENST00000493673 KRTAP10-7P60409 375 aaPredicted RBP6.33□□□□□ -1.4
PSMB4-205ENST00000493673 SPRR2FQ96RM1 72 aa6.33□□□□□ -1.4
PSMB4-205ENST00000493673 NEBP20929 6669 aa6.33□□□□□ -1.4
PSMB4-205ENST00000493673 KRTAP10-12P60413 245 aa6.33□□□□□ -1.4
PSMB4-205ENST00000493673 KRTAP4-8A0A0G2JLE6 195 aa6.29□□□□□ -1.4
PSMB4-205ENST00000493673 KRTAP9-9Q9BYP9 154 aa6.28□□□□□ -1.4
PSMB4-205ENST00000493673 KRTAP9-4Q9BYQ2 154 aa6.28□□□□□ -1.4
PSMB4-205ENST00000493673 LINC01558Q9Y6Z2 57 aa6.28□□□□□ -1.4
PSMB4-205ENST00000493673 SVIPQ8NHG7 77 aa6.27□□□□□ -1.41
PSMB4-205ENST00000493673 V9GYY9 64 aa6.26□□□□□ -1.41
PSMB4-205ENST00000493673 KRTAP12-1P59990 96 aa6.26□□□□□ -1.41
PSMB4-205ENST00000493673 MDN1Q9NU22 5596 aa6.25□□□□□ -1.41
PSMB4-205ENST00000493673 SPRR2EP22531 72 aa6.2□□□□□ -1.42
PSMB4-205ENST00000493673 SPRR2BP35325 72 aa6.2□□□□□ -1.42
PSMB4-205ENST00000493673 SPRR2AP35326 72 aa6.2□□□□□ -1.42
PSMB4-205ENST00000493673 A8MU10 97 aa6.2□□□□□ -1.42
PSMB4-205ENST00000493673 PSPHP1O15172 72 aa6.2□□□□□ -1.42
PSMB4-205ENST00000493673 PRO0628Q9UI54 55 aa6.15□□□□□ -1.42
PSMB4-205ENST00000493673 UQCR11O14957 56 aa6.14□□□□□ -1.43
PSMB4-205ENST00000493673 KRTAP20-1Q3LI63 56 aa6.14□□□□□ -1.43
PSMB4-205ENST00000493673 BRK1Q8WUW1 75 aa6.12□□□□□ -1.43
PSMB4-205ENST00000493673 LCE1AQ5T7P2 110 aa6.11□□□□□ -1.43
PSMB4-205ENST00000493673 KRTAP2-3P0C7H8 128 aa6.06□□□□□ -1.44
PSMB4-205ENST00000493673 KRTAP2-4Q9BYR9 128 aa6.06□□□□□ -1.44
PSMB4-205ENST00000493673 LCE1DQ5T752 114 aa6.01□□□□□ -1.45
PSMB4-205ENST00000493673 KRTAP4-7Q9BYR0 210 aa6.01□□□□□ -1.45
PSMB4-205ENST00000493673 SPRR2DP22532 72 aa6□□□□□ -1.45
PSMB4-205ENST00000493673 MIR22HGQ0VDD5 57 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms