RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 OCR1Q9BZK8 76 aa6.92□□□□□ -1.3
SS18L1-205ENST00000492466 FAM236AA0A1B0GUQ0 79 aa6.91□□□□□ -1.3
SS18L1-205ENST00000492466 FAM236BA0A1B0GV22 79 aa6.91□□□□□ -1.3
SS18L1-205ENST00000492466 LCA10Q71F78 164 aa6.91□□□□□ -1.3
SS18L1-205ENST00000492466 CSAG1Q6PB30 78 aa6.9□□□□□ -1.3
SS18L1-205ENST00000492466 MT-ATP8P03928 68 aa6.85□□□□□ -1.31
SS18L1-205ENST00000492466 IMUPQ9GZP8 106 aa6.85□□□□□ -1.31
SS18L1-205ENST00000492466 H3BPC8 53 aa6.83□□□□□ -1.32
SS18L1-205ENST00000492466 KLKP1Q107X0 134 aa6.82□□□□□ -1.32
SS18L1-205ENST00000492466 A8MUN3 132 aa6.81□□□□□ -1.32
SS18L1-205ENST00000492466 NDUFC1O43677 76 aa6.79□□□□□ -1.32
SS18L1-205ENST00000492466 KRTAP6-3Q3LI67 103 aa6.78□□□□□ -1.32
SS18L1-205ENST00000492466 SMIM20Q8N5G0 67 aa6.78□□□□□ -1.32
SS18L1-205ENST00000492466 TRAV7A0A075B6U4 112 aa6.73□□□□□ -1.33
SS18L1-205ENST00000492466 KRTAP3-3Q9BYR6 98 aa6.73□□□□□ -1.33
SS18L1-205ENST00000492466 NEBP20929 6669 aa6.68□□□□□ -1.34
SS18L1-205ENST00000492466 DMAC1Q96GE9 116 aa6.66□□□□□ -1.34
SS18L1-205ENST00000492466 MUC12Q9UKN1 5478 aa6.66□□□□□ -1.34
SS18L1-205ENST00000492466 MT1BP07438 61 aa6.6□□□□□ -1.35
SS18L1-205ENST00000492466 ADM2Q7Z4H4 148 aa6.6□□□□□ -1.35
SS18L1-205ENST00000492466 SNURFQ9Y675 71 aa6.6□□□□□ -1.35
SS18L1-205ENST00000492466 H0YAA0 97 aa6.59□□□□□ -1.35
SS18L1-205ENST00000492466 Q5VV11 94 aa6.59□□□□□ -1.35
SS18L1-205ENST00000492466 CRIPTQ9P021 101 aa6.59□□□□□ -1.35
SS18L1-205ENST00000492466 ACYP2P14621 99 aa6.57□□□□□ -1.36
SS18L1-205ENST00000492466 C20orf197Q8N268 126 aa6.56□□□□□ -1.36
SS18L1-205ENST00000492466 SERP2Q8N6R1 65 aa6.56□□□□□ -1.36
SS18L1-205ENST00000492466 SPRR2GQ9BYE4 73 aa6.56□□□□□ -1.36
SS18L1-205ENST00000492466 CHKB-CPT1BH3BT56 60 aa6.54□□□□□ -1.36
SS18L1-205ENST00000492466 KRTAP19-8Q3LI54 63 aa6.54□□□□□ -1.36
SS18L1-205ENST00000492466 A6NN06 94 aa6.53□□□□□ -1.36
SS18L1-205ENST00000492466 SPTSSBQ8NFR3 76 aa6.53□□□□□ -1.36
SS18L1-205ENST00000492466 KRTAP10-5P60370 271 aa6.46□□□□□ -1.38
SS18L1-205ENST00000492466 SPANXA2-OT1Q8N9U9 137 aa6.45□□□□□ -1.38
SS18L1-205ENST00000492466 R4GN34 69 aa6.45□□□□□ -1.38
SS18L1-205ENST00000492466 KMT2DO14686 5537 aa6.45□□□□□ -1.38
SS18L1-205ENST00000492466 MDN1Q9NU22 5596 aa6.44□□□□□ -1.38
SS18L1-205ENST00000492466 P0C880 135 aa6.42□□□□□ -1.38
SS18L1-205ENST00000492466 M0QZ58 72 aa6.41□□□□□ -1.38
SS18L1-205ENST00000492466 COX7CP15954 63 aa6.41□□□□□ -1.38
SS18L1-205ENST00000492466 KRTAP5-9P26371 169 aa6.4□□□□□ -1.38
SS18L1-205ENST00000492466 KRTAP20-1Q3LI63 56 aa6.34□□□□□ -1.39
SS18L1-205ENST00000492466 LINC01554Q52M75 96 aa6.34□□□□□ -1.39
SS18L1-205ENST00000492466 ANAPC13Q9BS18 74 aa6.34□□□□□ -1.39
SS18L1-205ENST00000492466 PLAC4Q8WY50 150 aa6.33□□□□□ -1.4
SS18L1-205ENST00000492466 KRTAP3-2Q9BYR7 98 aa6.31□□□□□ -1.4
SS18L1-205ENST00000492466 COA5Q86WW8 74 aa6.3□□□□□ -1.4
SS18L1-205ENST00000492466 PRO2289Q9P1D8 64 aa6.25□□□□□ -1.41
SS18L1-205ENST00000492466 H7BZZ5 65 aa6.24□□□□□ -1.41
SS18L1-205ENST00000492466 CYSTM1Q9H1C7 97 aa6.22□□□□□ -1.41
SS18L1-205ENST00000492466 SEC61GP60059 68 aa6.21□□□□□ -1.42
SS18L1-205ENST00000492466 SERP1Q9Y6X1 66 aa6.17□□□□□ -1.42
SS18L1-205ENST00000492466 CCDC179H3BU77 68 aa6.16□□□□□ -1.42
SS18L1-205ENST00000492466 KRTAP2-3P0C7H8 128 aa6.14□□□□□ -1.43
SS18L1-205ENST00000492466 KRTAP2-4Q9BYR9 128 aa6.14□□□□□ -1.43
SS18L1-205ENST00000492466 MT1XP80297 61 aa6.12□□□□□ -1.43
SS18L1-205ENST00000492466 SPRR2FQ96RM1 72 aa6.11□□□□□ -1.43
SS18L1-205ENST00000492466 PCP4P48539 62 aa6.09□□□□□ -1.43
SS18L1-205ENST00000492466 ATP5EP56381 51 aaPredicted RBP6.08□□□□□ -1.44
SS18L1-205ENST00000492466 SPRR2EP22531 72 aa6.06□□□□□ -1.44
SS18L1-205ENST00000492466 SPRR2BP35325 72 aa6.06□□□□□ -1.44
SS18L1-205ENST00000492466 SPRR2AP35326 72 aa6.06□□□□□ -1.44
SS18L1-205ENST00000492466 KRTAP13-4Q3LI77 160 aa6.04□□□□□ -1.44
SS18L1-205ENST00000492466 A0A1B0GU69 56 aa6.02□□□□□ -1.45
SS18L1-205ENST00000492466 TMEM258P61165 79 aa6.01□□□□□ -1.45
SS18L1-205ENST00000492466 LCE1AQ5T7P2 110 aa6.01□□□□□ -1.45
SS18L1-205ENST00000492466 A0A0D9SG42 100 aa6□□□□□ -1.45
SS18L1-205ENST00000492466 A0A1B0GU33 70 aa6□□□□□ -1.45
SS18L1-205ENST00000492466 KRTAP12-2P59991 146 aa6□□□□□ -1.45
SS18L1-205ENST00000492466 CAMK2N1Q7Z7J9 78 aa6□□□□□ -1.45
SS18L1-205ENST00000492466 KRTAP8-1Q8IUC2 63 aa6□□□□□ -1.45
SS18L1-205ENST00000492466 SPATA8Q6RVD6 105 aa5.96□□□□□ -1.46
SS18L1-205ENST00000492466 KRTAP4-8A0A0G2JLE6 195 aa5.95□□□□□ -1.46
SS18L1-205ENST00000492466 KRTAP4-8Q9BYQ9 185 aa5.95□□□□□ -1.46
SS18L1-205ENST00000492466 PRR15LQ9BU68 103 aa5.93□□□□□ -1.46
SS18L1-205ENST00000492466 KRTAP2-2Q9BYT5 123 aa5.93□□□□□ -1.46
SS18L1-205ENST00000492466 KRTAP2-1Q9BYU5 128 aa5.93□□□□□ -1.46
SS18L1-205ENST00000492466 SPINT4Q6UDR6 99 aa5.91□□□□□ -1.46
SS18L1-205ENST00000492466 SMIM26A0A096LP01 95 aa5.87□□□□□ -1.47
SS18L1-205ENST00000492466 SPRR2DP22532 72 aa5.85□□□□□ -1.47
SS18L1-205ENST00000492466 KRTAP10-7P60409 375 aaPredicted RBP5.85□□□□□ -1.47
SS18L1-205ENST00000492466 KRTAP10-12P60413 245 aa5.81□□□□□ -1.48
SS18L1-205ENST00000492466 LINC01558Q9Y6Z2 57 aa5.79□□□□□ -1.48
SS18L1-205ENST00000492466 KRTAP12-1P59990 96 aa5.78□□□□□ -1.48
SS18L1-205ENST00000492466 A8MU10 97 aa5.77□□□□□ -1.49
SS18L1-205ENST00000492466 RPS28P62857 69 aaKnown RBP5.77□□□□□ -1.49
SS18L1-205ENST00000492466 LCE3BQ5TA77 95 aa5.73□□□□□ -1.49
SS18L1-205ENST00000492466 UQCR11O14957 56 aa5.68□□□□□ -1.5
SS18L1-205ENST00000492466 V9GYY9 64 aa5.63□□□□□ -1.51
SS18L1-205ENST00000492466 DSTQ03001 7570 aaKnown RBP5.62□□□□□ -1.51
SS18L1-205ENST00000492466 Q1T7F1 81 aa5.61□□□□□ -1.51
SS18L1-205ENST00000492466 PSPHP1O15172 72 aa5.57□□□□□ -1.52
SS18L1-205ENST00000492466 MIR22HGQ0VDD5 57 aa5.57□□□□□ -1.52
SS18L1-205ENST00000492466 GPR98Q8WXG9 6306 aa5.56□□□□□ -1.52
SS18L1-205ENST00000492466 TNP1P09430 55 aa5.53□□□□□ -1.52
SS18L1-205ENST00000492466 K7ERS5 55 aa5.52□□□□□ -1.53
SS18L1-205ENST00000492466 KRTAP19-7Q3SYF9 63 aa5.49□□□□□ -1.53
SS18L1-205ENST00000492466 LCE5AQ5TCM9 118 aa5.49□□□□□ -1.53
SS18L1-205ENST00000492466 C10orf95Q9H7T3 257 aa5.49□□□□□ -1.53
SS18L1-205ENST00000492466 A6NED7 52 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms