RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 SERP2Q8N6R1 65 aa5.36□□□□□ -1.55
CLCNKA-206ENST00000491433 Q5W150 140 aa5.35□□□□□ -1.55
CLCNKA-206ENST00000491433 C5orf47Q569G3 176 aa5.33□□□□□ -1.56
CLCNKA-206ENST00000491433 COX7CP15954 63 aa5.32□□□□□ -1.56
CLCNKA-206ENST00000491433 ZCCHC13Q8WW36 166 aaKnown RBP5.31□□□□□ -1.56
CLCNKA-206ENST00000491433 NDUFS5O43920 106 aa5.3□□□□□ -1.56
CLCNKA-206ENST00000491433 ANAPC13Q9BS18 74 aa5.3□□□□□ -1.56
CLCNKA-206ENST00000491433 TRAV22A0A0B4J277 110 aa5.29□□□□□ -1.56
CLCNKA-206ENST00000491433 H3BPC8 53 aa5.29□□□□□ -1.56
CLCNKA-206ENST00000491433 SPINK7P58062 85 aa5.27□□□□□ -1.57
CLCNKA-206ENST00000491433 H0Y9P7 68 aa5.26□□□□□ -1.57
CLCNKA-206ENST00000491433 KLKP1Q107X0 134 aa5.26□□□□□ -1.57
CLCNKA-206ENST00000491433 IGKV2-30P06310 120 aa5.24□□□□□ -1.57
CLCNKA-206ENST00000491433 MP68P56378 58 aa5.24□□□□□ -1.57
CLCNKA-206ENST00000491433 LOC101927531A0A1B0GV80 90 aa5.23□□□□□ -1.57
CLCNKA-206ENST00000491433 A6NN06 94 aa5.23□□□□□ -1.57
CLCNKA-206ENST00000491433 SPRR2EP22531 72 aa5.23□□□□□ -1.57
CLCNKA-206ENST00000491433 SPRR2BP35325 72 aa5.23□□□□□ -1.57
CLCNKA-206ENST00000491433 SPRR2AP35326 72 aa5.23□□□□□ -1.57
CLCNKA-206ENST00000491433 PCP4P48539 62 aa5.23□□□□□ -1.57
CLCNKA-206ENST00000491433 CCDC179H3BU77 68 aa5.22□□□□□ -1.57
CLCNKA-206ENST00000491433 C1orf64Q8NEQ6 169 aa5.22□□□□□ -1.57
CLCNKA-206ENST00000491433 LINC00208Q96KT6 92 aa5.22□□□□□ -1.57
CLCNKA-206ENST00000491433 CYP4F30PQ9H0H9 118 aa5.22□□□□□ -1.57
CLCNKA-206ENST00000491433 C20orf197Q8N268 126 aa5.21□□□□□ -1.58
CLCNKA-206ENST00000491433 CYSTM1Q9H1C7 97 aa5.19□□□□□ -1.58
CLCNKA-206ENST00000491433 SNURFQ9Y675 71 aa5.18□□□□□ -1.58
CLCNKA-206ENST00000491433 C7orf65Q6ZTY9 151 aa5.17□□□□□ -1.58
CLCNKA-206ENST00000491433 H7BZZ5 65 aa5.16□□□□□ -1.58
CLCNKA-206ENST00000491433 NDUFC1O43677 76 aa5.16□□□□□ -1.58
CLCNKA-206ENST00000491433 H1FX-AS1Q4G0G2 97 aa5.15□□□□□ -1.59
CLCNKA-206ENST00000491433 IGKV2D-30A0A075B6S6 120 aa5.14□□□□□ -1.59
CLCNKA-206ENST00000491433 SPANXA2-OT1Q8N9U9 137 aa5.12□□□□□ -1.59
CLCNKA-206ENST00000491433 Q5VV11 94 aa5.1□□□□□ -1.59
CLCNKA-206ENST00000491433 KRTAP3-1Q9BYR8 98 aa5.08□□□□□ -1.6
CLCNKA-206ENST00000491433 SPRR2DP22532 72 aa5.07□□□□□ -1.6
CLCNKA-206ENST00000491433 SPRR2FQ96RM1 72 aa5.07□□□□□ -1.6
CLCNKA-206ENST00000491433 KRTAP10-5P60370 271 aa5.06□□□□□ -1.6
CLCNKA-206ENST00000491433 MT1BP07438 61 aa5.05□□□□□ -1.6
CLCNKA-206ENST00000491433 TMEM258P61165 79 aa5.05□□□□□ -1.6
CLCNKA-206ENST00000491433 C4orf26Q17RF5 130 aa5.04□□□□□ -1.6
CLCNKA-206ENST00000491433 DMAC1Q96GE9 116 aa5.04□□□□□ -1.6
CLCNKA-206ENST00000491433 A8MUN3 132 aa5.02□□□□□ -1.61
CLCNKA-206ENST00000491433 KRTAP19-8Q3LI54 63 aa5.02□□□□□ -1.61
CLCNKA-206ENST00000491433 ATP5EP56381 51 aaPredicted RBP5.01□□□□□ -1.61
CLCNKA-206ENST00000491433 LCE1AQ5T7P2 110 aa5□□□□□ -1.61
CLCNKA-206ENST00000491433 LCE3BQ5TA77 95 aa5□□□□□ -1.61
CLCNKA-206ENST00000491433 SPRR2GQ9BYE4 73 aa4.99□□□□□ -1.61
CLCNKA-206ENST00000491433 DSTQ03001 7570 aaKnown RBP4.97□□□□□ -1.61
CLCNKA-206ENST00000491433 ACYP2P14621 99 aa4.96□□□□□ -1.62
CLCNKA-206ENST00000491433 AHNAK2Q8IVF2 5795 aa4.92□□□□□ -1.62
CLCNKA-206ENST00000491433 RPS28P62857 69 aaKnown RBP4.91□□□□□ -1.62
CLCNKA-206ENST00000491433 CSAG1Q6PB30 78 aa4.91□□□□□ -1.62
CLCNKA-206ENST00000491433 KRTAP3-3Q9BYR6 98 aa4.91□□□□□ -1.62
CLCNKA-206ENST00000491433 COA5Q86WW8 74 aa4.89□□□□□ -1.63
CLCNKA-206ENST00000491433 KRTAP4-9Q9BYQ8 210 aa4.89□□□□□ -1.63
CLCNKA-206ENST00000491433 SERP1Q9Y6X1 66 aa4.89□□□□□ -1.63
CLCNKA-206ENST00000491433 S4R3F8 94 aa4.87□□□□□ -1.63
CLCNKA-206ENST00000491433 LCA10Q71F78 164 aa4.86□□□□□ -1.63
CLCNKA-206ENST00000491433 CRIPTQ9P021 101 aa4.84□□□□□ -1.63
CLCNKA-206ENST00000491433 KRTAP5-10Q6L8G5 202 aa4.82□□□□□ -1.64
CLCNKA-206ENST00000491433 PRO2289Q9P1D8 64 aa4.81□□□□□ -1.64
CLCNKA-206ENST00000491433 HMCN1Q96RW7 5635 aa4.8□□□□□ -1.64
CLCNKA-206ENST00000491433 SPRR5A0A1B0GTR4 108 aa4.79□□□□□ -1.64
CLCNKA-206ENST00000491433 KRTAP8-1Q8IUC2 63 aa4.79□□□□□ -1.64
CLCNKA-206ENST00000491433 CHKB-CPT1BH3BT56 60 aa4.78□□□□□ -1.64
CLCNKA-206ENST00000491433 KRTAP5-7Q6L8G8 165 aa4.78□□□□□ -1.64
CLCNKA-206ENST00000491433 SPTSSBQ8NFR3 76 aa4.77□□□□□ -1.65
CLCNKA-206ENST00000491433 SMIM26A0A096LP01 95 aa4.75□□□□□ -1.65
CLCNKA-206ENST00000491433 H0YAA0 97 aa4.75□□□□□ -1.65
CLCNKA-206ENST00000491433 LINC01558Q9Y6Z2 57 aa4.73□□□□□ -1.65
CLCNKA-206ENST00000491433 Q1T7F1 81 aa4.72□□□□□ -1.65
CLCNKA-206ENST00000491433 KRTAP3-2Q9BYR7 98 aa4.71□□□□□ -1.66
CLCNKA-206ENST00000491433 KRTAP12-2P59991 146 aa4.68□□□□□ -1.66
CLCNKA-206ENST00000491433 LCE1DQ5T752 114 aa4.67□□□□□ -1.66
CLCNKA-206ENST00000491433 V9GYY9 64 aa4.67□□□□□ -1.66
CLCNKA-206ENST00000491433 MT1XP80297 61 aa4.64□□□□□ -1.67
CLCNKA-206ENST00000491433 PLAC4Q8WY50 150 aa4.64□□□□□ -1.67
CLCNKA-206ENST00000491433 P0C880 135 aa4.61□□□□□ -1.67
CLCNKA-206ENST00000491433 ADM2Q7Z4H4 148 aa4.61□□□□□ -1.67
CLCNKA-206ENST00000491433 A0A1B0GU69 56 aa4.6□□□□□ -1.67
CLCNKA-206ENST00000491433 SEC61GP60059 68 aa4.57□□□□□ -1.68
CLCNKA-206ENST00000491433 PRR15LQ9BU68 103 aa4.57□□□□□ -1.68
CLCNKA-206ENST00000491433 KRTAP4-8A0A0G2JLE6 195 aa4.54□□□□□ -1.68
CLCNKA-206ENST00000491433 PSPHP1O15172 72 aa4.54□□□□□ -1.68
CLCNKA-206ENST00000491433 KRTAP4-8Q9BYQ9 185 aa4.54□□□□□ -1.68
CLCNKA-206ENST00000491433 A0A1B0GU33 70 aa4.53□□□□□ -1.68
CLCNKA-206ENST00000491433 M0QZ58 72 aa4.51□□□□□ -1.69
CLCNKA-206ENST00000491433 MT4P47944 62 aa4.51□□□□□ -1.69
CLCNKA-206ENST00000491433 KRTAP13-4Q3LI77 160 aa4.5□□□□□ -1.69
CLCNKA-206ENST00000491433 R4GN34 69 aa4.49□□□□□ -1.69
CLCNKA-206ENST00000491433 KRTAP5-3Q6L8H2 238 aa4.48□□□□□ -1.69
CLCNKA-206ENST00000491433 UQCR11O14957 56 aa4.47□□□□□ -1.69
CLCNKA-206ENST00000491433 SPATA8Q6RVD6 105 aa4.46□□□□□ -1.7
CLCNKA-206ENST00000491433 KRTAP10-12P60413 245 aa4.44□□□□□ -1.7
CLCNKA-206ENST00000491433 KRTAP10-7P60409 375 aaPredicted RBP4.41□□□□□ -1.7
CLCNKA-206ENST00000491433 LCE4AQ5TA78 99 aa4.41□□□□□ -1.7
CLCNKA-206ENST00000491433 AHNAKQ09666 5890 aaKnown RBP4.41□□□□□ -1.7
CLCNKA-206ENST00000491433 MIR22HGQ0VDD5 57 aa4.4□□□□□ -1.71
CLCNKA-206ENST00000491433 A6NED7 52 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms